FFCP PHASE1:Hg19::chr4:71542660..71542684,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:71542660..71542684,- | |||
|coexpression_cluster_id=C394 | |||
|description=CAGE_peak_at_chr4:71542660..71542684,- | |||
|id=chr4:71542660..71542684,- | |||
|ontology_enrichment_celltype=CL:0000945!1.40e-25!24;CL:0000826!1.40e-25!24;CL:0000236!3.16e-22!14;CL:0000542!1.16e-11!53;CL:0000051!1.16e-11!53;CL:0000838!3.04e-10!52;CL:0000785!1.36e-08!2;CL:0000955!1.36e-08!2;CL:0000818!1.36e-08!2;CL:0000954!1.36e-08!2;CL:0000816!1.36e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.44e-22;13!CL:0000945;4.24e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.30e-20,14;CL:0000945,5.07e-12,24;CL:0000826,5.07e-12,24 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.46e-13;1!UBERON:0006242;2.46e-13;1!UBERON:0001045;6.05e-13;1!UBERON:0006298;6.05e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.96e-26!115;UBERON:0001829!1.06e-09!2;UBERON:0001044!4.98e-07!6;UBERON:0003293!4.98e-07!6;UBERON:0003294!4.98e-07!6;UBERON:0010047!4.98e-07!6;UBERON:0000167!4.98e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.74e-24;2!UBERON:0001044;3.62e-18;6!UBERON:0003293;3.62e-18;6!UBERON:0003294;3.62e-18;6!UBERON:0010047;3.62e-18;6!UBERON:0003408;3.62e-18;6!UBERON:0000167;3.62e-18;6!UBERON:0001831;2.46e-13;1!UBERON:0001567;2.46e-13;1!UBERON:0000029;6.05e-13;1!UBERON:0001154;6.05e-13;1!UBERON:0001736;6.05e-13;1!UBERON:0001153;6.05e-13;1!UBERON:0002171;6.05e-13;1!UBERON:0009854;6.05e-13;1!UBERON:0006518;6.05e-13;1!UBERON:0008949;6.05e-13;1!UBERON:0000101;6.05e-13;1!UBERON:0002167;6.05e-13;1!UBERON:0004921;5.14e-11;33!UBERON:0001041;4.11e-08;14!UBERON:0004089;2.66e-07;2!UBERON:0000341;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.29e-24,2;UBERON:0001044,2.47e-18,6;UBERON:0003293,2.47e-18,6;UBERON:0003294,2.47e-18,6;UBERON:0010047,2.47e-18,6;UBERON:0000167,2.47e-18,6;UBERON:0001831,2.32e-13,1;UBERON:0001567,2.32e-13,1;UBERON:0008801,2.32e-13,1;UBERON:0000029,3.33e-13,1;UBERON:0001154,4.23e-13,1;UBERON:0001153,4.23e-13,1;UBERON:0001045,4.23e-13,1;UBERON:0001736,4.77e-13,1;UBERON:0006298,4.77e-13,1;UBERON:0002171,8.64e-13,1;UBERON:0006518,8.64e-13,1;UBERON:0008949,8.64e-13,1;UBERON:0000101,8.64e-13,1;UBERON:0002167,8.64e-13,1;UBERON:0003408,3.04e-11,10;UBERON:0007023,4.44e-11,114;UBERON:0004089,2.58e-07,2;UBERON:0000341,4.69e-07,2 | |||
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| ||
|short_description=p@chr4:71542660..71542684,- | |||
}} | }} |
Latest revision as of 06:24, 30 July 2015
Short description: | p@chr4:71542660..71542684, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:71542660..71542684, - |
Coexpression cluster: | C394_submaxillary_small_colon_throat_appendix_tonsil_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.30e-20 | 14 |
lymphocyte of B lineage | 5.07e-12 | 24 |
pro-B cell | 5.07e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.29e-24 | 2 |
saliva-secreting gland | 2.47e-18 | 6 |
gland of oral region | 2.47e-18 | 6 |
gland of foregut | 2.47e-18 | 6 |
oral gland | 2.47e-18 | 6 |
oral cavity | 2.47e-18 | 6 |
parotid gland | 2.32e-13 | 1 |
cheek | 2.32e-13 | 1 |
parotid gland primordium | 2.32e-13 | 1 |
lymph node | 3.33e-13 | 1 |
vermiform appendix | 4.23e-13 | 1 |
caecum | 4.23e-13 | 1 |
midgut | 4.23e-13 | 1 |
submandibular gland | 4.77e-13 | 1 |
submandibular gland primordium | 4.77e-13 | 1 |
lower lobe of right lung | 8.64e-13 | 1 |
right lung lobe | 8.64e-13 | 1 |
lower lobe of lung | 8.64e-13 | 1 |
lobe of lung | 8.64e-13 | 1 |
right lung | 8.64e-13 | 1 |
gland of gut | 3.04e-11 | 10 |
adult organism | 4.44e-11 | 114 |
midface | 2.58e-07 | 2 |
throat | 4.69e-07 | 2 |