FFCP PHASE1:Hg19::chr5:90830481..90830492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:90830481..90830492,+ | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_at_chr5:90830481..90830492,+ | |description=CAGE_peak_at_chr5:90830481..90830492,+ | ||
|id=chr5:90830481..90830492,+ | |id=chr5:90830481..90830492,+ | ||
|ontology_enrichment_celltype=CL:0000511!3.58e-26!1;CL:0002625!3.58e-26!1;CL:0000216!3.58e-26!1;CL:0002574!1.26e-25!1 | |ontology_enrichment_celltype=CL:0000511!3.58e-26!1;CL:0002625!3.58e-26!1;CL:0000216!3.58e-26!1;CL:0002574!1.26e-25!1 | ||
|ontology_enrichment_celltype_v019=CL:0000511;4.66e-66;1!CL:0002625;4.66e-66;1!CL:0000216;4.66e-66;1!CL:0000154;2.74e-12;6!CL:0002092;5.73e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.66e-66,1;CL:0002625,4.66e-66,1;CL:0000216,4.66e-66,1;CL:0000154,2.74e-12,6;CL:0002092,5.73e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!2.16e-26!1;DOID:0070004!2.16e-26!1;DOID:3193!9.40e-14!2;DOID:962!9.40e-14!2;DOID:171!6.61e-11!10;DOID:1192!1.30e-09!3 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.23e-66;1!DOID:0070004;1.23e-66;1!DOID:1036;1.35e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.23e-66,1;DOID:0070004,1.23e-66,1;DOID:1036,1.35e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0001136!3.58e-26!1;UBERON:0001343!3.58e-26!1;UBERON:0004910!3.58e-26!1;UBERON:0005154!3.58e-26!1;UBERON:0005295!3.58e-26!1;UBERON:0004813!3.58e-26!1;UBERON:0005297!3.58e-26!1;UBERON:0005294!3.58e-26!1;UBERON:0010141!3.58e-26!1;UBERON:0005891!3.58e-26!1;UBERON:0004909!8.28e-14!2;UBERON:0003714!9.40e-14!2;UBERON:0005904!1.49e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.66e-66;1!UBERON:0001343;4.66e-66;1!UBERON:0004910;4.66e-66;1!UBERON:0004813;4.66e-66;1!UBERON:0004909;7.05e-34;2!UBERON:0005904;1.03e-17;4!UBERON:0000473;1.47e-09;8!UBERON:0000058;6.56e-08;10!UBERON:0003135;2.63e-07;11!UBERON:0002371;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.66e-66,1;UBERON:0001343,4.66e-66,1;UBERON:0004910,4.66e-66,1;UBERON:0005154,4.66e-66,1;UBERON:0005295,4.66e-66,1;UBERON:0004813,4.66e-66,1;UBERON:0005297,4.66e-66,1;UBERON:0005294,4.66e-66,1;UBERON:0010141,4.66e-66,1;UBERON:0005891,4.66e-66,1;UBERON:0004909,7.05e-34,2;UBERON:0005904,1.03e-17,4;UBERON:0000473,1.47e-09,8;UBERON:0004871,1.47e-09,8;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11 | |||
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|short_description=p@chr5:90830481..90830492,+ | |short_description=p@chr5:90830481..90830492,+ | ||
}} | }} |
Latest revision as of 17:16, 30 July 2015
Short description: | p@chr5:90830481..90830492, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:90830481..90830492, + |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.66e-66 | 1 |
seminiferous tubule epithelial cell | 4.66e-66 | 1 |
Sertoli cell | 4.66e-66 | 1 |
protein secreting cell | 2.74e-12 | 6 |
bone marrow cell | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.66e-66 | 1 |
seminiferous tubule of testis | 4.66e-66 | 1 |
epithelium of male gonad | 4.66e-66 | 1 |
epithelial cord | 4.66e-66 | 1 |
sex cord | 4.66e-66 | 1 |
seminiferous tubule epithelium | 4.66e-66 | 1 |
testis sex cord | 4.66e-66 | 1 |
genital ridge | 4.66e-66 | 1 |
primitive sex cord of indifferent gonad | 4.66e-66 | 1 |
coelomic epithelium | 4.66e-66 | 1 |
epithelium of gonad | 7.05e-34 | 2 |
duct of male reproductive system | 1.03e-17 | 4 |
testis | 1.47e-09 | 8 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.23e-66 | 1 |
myeloma | 1.23e-66 | 1 |
chronic leukemia | 1.35e-09 | 8 |