FFCP PHASE1:Hg19::chr6:113697568..113697589,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:113697568..113697589,- | |||
|coexpression_cluster_id=C2837 | |coexpression_cluster_id=C2837 | ||
|description=CAGE_peak_at_chr6:113697568..113697589,- | |description=CAGE_peak_at_chr6:113697568..113697589,- | ||
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|ontology_enrichment_celltype=CL:0000055!6.61e-32!180;CL:0000057!4.18e-29!75;CL:0002620!2.17e-15!23;CL:0000144!4.39e-13!625;CL:0002371!9.55e-13!591;CL:0000048!1.65e-12!430;CL:0000723!6.69e-12!436;CL:0000034!4.01e-11!444;CL:0000548!3.20e-10!679;CL:0000004!3.20e-10!679;CL:0000255!3.20e-10!679;CL:0000012!5.50e-10!682;CL:0002334!1.27e-09!12;CL:0000359!2.34e-09!32;CL:0000680!8.89e-09!57;CL:0000056!8.89e-09!57;CL:0000355!8.89e-09!57;CL:0000192!1.91e-08!42;CL:0000514!1.91e-08!42;CL:0002556!2.08e-08!6;CL:0000187!2.20e-07!54;CL:0000222!3.90e-07!119;CL:0000003!4.58e-07!722 | |ontology_enrichment_celltype=CL:0000055!6.61e-32!180;CL:0000057!4.18e-29!75;CL:0002620!2.17e-15!23;CL:0000144!4.39e-13!625;CL:0002371!9.55e-13!591;CL:0000048!1.65e-12!430;CL:0000723!6.69e-12!436;CL:0000034!4.01e-11!444;CL:0000548!3.20e-10!679;CL:0000004!3.20e-10!679;CL:0000255!3.20e-10!679;CL:0000012!5.50e-10!682;CL:0002334!1.27e-09!12;CL:0000359!2.34e-09!32;CL:0000680!8.89e-09!57;CL:0000056!8.89e-09!57;CL:0000355!8.89e-09!57;CL:0000192!1.91e-08!42;CL:0000514!1.91e-08!42;CL:0002556!2.08e-08!6;CL:0000187!2.20e-07!54;CL:0000222!3.90e-07!119;CL:0000003!4.58e-07!722 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000057,2.35e-33,76;CL:0002620,3.96e-26,23;CL:1000306,3.03e-16,4;CL:0002547,3.03e-16,4;CL:0000197,2.76e-11,6;CL:0000098,2.76e-11,6;CL:0002167,2.76e-11,6;CL:0002556,8.42e-11,6;CL:0002583,4.79e-09,2;CL:0002334,1.06e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!5.19e-08!5;DOID:450!5.19e-08!5;DOID:66!5.19e-08!5;DOID:423!5.19e-08!5;DOID:0080000!5.19e-08!5;DOID:11722!5.19e-08!5 | |ontology_enrichment_disease=DOID:17!5.19e-08!5;DOID:450!5.19e-08!5;DOID:66!5.19e-08!5;DOID:423!5.19e-08!5;DOID:0080000!5.19e-08!5;DOID:11722!5.19e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.26e-19;5!DOID:450;1.26e-19;5!DOID:66;1.26e-19;5!DOID:423;1.26e-19;5!DOID:0080000;1.26e-19;5!DOID:11722;1.26e-19;5 | |ontology_enrichment_disease_v019=DOID:17;1.26e-19;5!DOID:450;1.26e-19;5!DOID:66;1.26e-19;5!DOID:423;1.26e-19;5!DOID:0080000;1.26e-19;5!DOID:11722;1.26e-19;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,5.41e-20,5;DOID:450,5.41e-20,5;DOID:66,5.41e-20,5;DOID:423,5.41e-20,5;DOID:0080000,5.41e-20,5;DOID:11722,5.41e-20,5 | |||
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|short_description=p@chr6:113697568..113697589,- | |short_description=p@chr6:113697568..113697589,- | ||
}} | }} |
Latest revision as of 18:28, 30 July 2015
Short description: | p@chr6:113697568..113697589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:113697568..113697589, - |
Coexpression cluster: | C2837_liposarcoma_Fibroblast_Ewing_Olfactory_mesothelioma_Smooth_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.35e-33 | 76 |
skin fibroblast | 3.96e-26 | 23 |
fibroblast of tunica adventitia of artery | 3.03e-16 | 4 |
fibroblast of the aortic adventitia | 3.03e-16 | 4 |
receptor cell | 2.76e-11 | 6 |
sensory epithelial cell | 2.76e-11 | 6 |
olfactory epithelial cell | 2.76e-11 | 6 |
fibroblast of periodontium | 8.42e-11 | 6 |
subcutaneous preadipocyte | 4.79e-09 | 2 |
preadipocyte | 1.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 3.52e-18 | 46 |
integumental system | 3.52e-18 | 46 |
artery wall | 3.03e-16 | 4 |
tunica adventitia of artery | 3.03e-16 | 4 |
adventitia | 3.03e-16 | 4 |
tunica adventitia of blood vessel | 3.03e-16 | 4 |
aorta tunica adventitia | 3.03e-16 | 4 |
aorta wall | 3.03e-16 | 4 |
skin of body | 1.19e-15 | 41 |
surface structure | 9.55e-14 | 99 |
periodontium | 8.42e-11 | 6 |
dentition | 8.42e-11 | 6 |
blood vessel layer | 2.60e-09 | 7 |
skull | 2.90e-09 | 7 |
aorta | 1.75e-08 | 21 |
aortic system | 1.75e-08 | 21 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.41e-20 | 5 |
myotonic disease | 5.41e-20 | 5 |
muscle tissue disease | 5.41e-20 | 5 |
myopathy | 5.41e-20 | 5 |
muscular disease | 5.41e-20 | 5 |
myotonic dystrophy | 5.41e-20 | 5 |