FFCP PHASE1:Hg19::chr6:125284405..125284429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-220bp_to_ENST00000439075_5end | |association_with_transcript=-220bp_to_ENST00000439075_5end | ||
|cluster_id=chr6:125284405..125284429,- | |||
|coexpression_cluster_id=C383 | |coexpression_cluster_id=C383 | ||
|description=CAGE_peak_4_at_ENST00000439075_5end | |description=CAGE_peak_4_at_ENST00000439075_5end | ||
|id=chr6:125284405..125284429,- | |id=chr6:125284405..125284429,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.45e-12;2!CL:0000558;2.45e-12;2!CL:0002541;1.17e-08;3!CL:0002592;1.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.62e-12,2;CL:0000765,3.62e-12,2;CL:0000050,3.62e-12,2;CL:0000038,3.62e-12,2;CL:0000558,3.62e-12,2;CL:0000547,3.62e-12,2;CL:0000549,3.62e-12,2;CL:0000550,3.62e-12,2;CL:0000552,3.62e-12,2;CL:0002592,1.04e-08,3;CL:0002541,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.17e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;8.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.59e-08!129;UBERON:0007811!1.59e-08!129;UBERON:0000033!4.43e-08!123;UBERON:0000475!1.07e-07!365;UBERON:0000924!2.18e-07!173;UBERON:0006601!2.18e-07!173;UBERON:0000468!3.03e-07!659;UBERON:0004121!3.31e-07!169;UBERON:0001893!4.29e-07!34;UBERON:0002791!9.09e-07!33 | |ontology_enrichment_uberon=UBERON:0000153!1.59e-08!129;UBERON:0007811!1.59e-08!129;UBERON:0000033!4.43e-08!123;UBERON:0000475!1.07e-07!365;UBERON:0000924!2.18e-07!173;UBERON:0006601!2.18e-07!173;UBERON:0000468!3.03e-07!659;UBERON:0004121!3.31e-07!169;UBERON:0001893!4.29e-07!34;UBERON:0002791!9.09e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;1.17e-08;3!UBERON:0005985;1.17e-08;3!UBERON:0003124;1.17e-08;3!UBERON:0001621;1.17e-08;3!UBERON:0000920;1.17e-08;3!UBERON:0003343;6.49e-07;4!UBERON:0004785;6.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.04e-08,3;UBERON:0000920,1.40e-08,3;UBERON:0003343,6.50e-07,4;UBERON:0004785,6.50e-07,4 | |||
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| ||
|short_description=p4@ENST00000439075 | |short_description=p4@ENST00000439075 | ||
}} | }} |
Latest revision as of 19:05, 30 July 2015
Short description: | p4@ENST00000439075 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000439075_5end |
Coexpression cluster: | C383_oral_liposarcoma_small_Small_skeletal_amniotic_Astrocyte |
Association with transcript: | -220bp_to_ENST00000439075_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.62e-12 | 2 |
erythroblast | 3.62e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 3.62e-12 | 2 |
erythroid progenitor cell | 3.62e-12 | 2 |
reticulocyte | 3.62e-12 | 2 |
proerythroblast | 3.62e-12 | 2 |
basophilic erythroblast | 3.62e-12 | 2 |
polychromatophilic erythroblast | 3.62e-12 | 2 |
orthochromatic erythroblast | 3.62e-12 | 2 |
smooth muscle cell of the coronary artery | 1.04e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.04e-08 | 3 |
egg chorion | 1.40e-08 | 3 |
mucosa of oral region | 6.50e-07 | 4 |
respiratory system mucosa | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.14e-07 | 4 |