FFCP PHASE1:Hg19::chr6:130088354..130088379,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:130088354..130088379,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr6:130088354..130088379,- | |description=CAGE_peak_at_chr6:130088354..130088379,- | ||
|id=chr6:130088354..130088379,- | |id=chr6:130088354..130088379,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;4.44e-18;1!CL:0000911;4.44e-18;1!CL:0000814;4.44e-18;1!CL:0000228;6.23e-18;1!CL:0002372;6.23e-18;1!CL:0002601;1.33e-17;1!CL:0000097;1.61e-14;5!CL:0000163;1.77e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.44e-18,1;CL:0000914,4.44e-18,1;CL:0000911,4.44e-18,1;CL:0000814,4.44e-18,1;CL:0002042,4.44e-18,1;CL:0002039,4.44e-18,1;CL:0002040,4.44e-18,1;CL:0002041,4.44e-18,1;CL:0000228,6.23e-18,1;CL:0002372,6.23e-18,1;CL:0002601,1.22e-17,1;CL:0000097,1.61e-14,5;CL:0002028,1.61e-14,5;CL:0000893,1.03e-09,2;CL:0002489,1.03e-09,2;CL:0000809,1.03e-09,2;CL:0000808,1.03e-09,2;CL:0000894,1.03e-09,2;CL:0000806,1.03e-09,2;CL:0000807,1.03e-09,2;CL:0000805,1.03e-09,2;CL:0002425,1.03e-09,2;CL:0000163,1.77e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002425;1.03e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.70e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.79e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.65e-11!41;UBERON:0001890!2.65e-11!41;UBERON:0006240!2.65e-11!41;UBERON:0002420!5.09e-11!9;UBERON:0007245!5.09e-11!9;UBERON:0010009!5.09e-11!9;UBERON:0010011!5.09e-11!9;UBERON:0000454!5.09e-11!9;UBERON:0003080!5.88e-11!42;UBERON:0001049!7.20e-11!57;UBERON:0005068!7.20e-11!57;UBERON:0006241!7.20e-11!57;UBERON:0007135!7.20e-11!57;UBERON:0002346!3.65e-09!90;UBERON:0000955!4.12e-09!69;UBERON:0006238!4.12e-09!69;UBERON:0002616!4.42e-09!59;UBERON:0001017!5.39e-09!82;UBERON:0000073!5.43e-09!94;UBERON:0001016!5.43e-09!94;UBERON:0002020!1.21e-08!34;UBERON:0003528!1.21e-08!34;UBERON:0005743!2.31e-08!86;UBERON:0002791!1.69e-07!33;UBERON:0002308!1.77e-07!9;UBERON:0000125!1.77e-07!9;UBERON:0001905!1.96e-07!2;UBERON:0002757!1.96e-07!2;UBERON:0010134!1.96e-07!2;UBERON:0002784!1.96e-07!2;UBERON:0005408!1.96e-07!2;UBERON:0001899!1.96e-07!2;UBERON:0001893!3.20e-07!34;UBERON:0001876!4.02e-07!2;UBERON:0001894!8.13e-07!7;UBERON:0006222!8.13e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.59e-34;2!UBERON:0002757;2.59e-34;2!UBERON:0010134;2.59e-34;2!UBERON:0005408;2.59e-34;2!UBERON:0001899;2.59e-34;2!UBERON:0003296;1.03e-17;4!UBERON:0010133;1.03e-17;4!UBERON:0002784;1.03e-17;4!UBERON:0002346;2.49e-17;4!UBERON:0000923;2.49e-17;4!UBERON:0010316;2.49e-17;4!UBERON:0005291;2.49e-17;4!UBERON:0002050;4.54e-14;5!UBERON:0005423;4.54e-14;5!UBERON:0001894;1.53e-10;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.59e-34,2;UBERON:0002757,2.59e-34,2;UBERON:0010134,2.59e-34,2;UBERON:0005408,2.59e-34,2;UBERON:0001899,2.59e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0001894,1.53e-10,7;UBERON:0006222,1.53e-10,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.491337269247072,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.6562723580335,19.5467523509362,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70547620162874,0,0,0.179060963239896,9.63932238344335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,1.67043704337145,1.23087398947712,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953619473882272,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,3.45731515171559,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0,0,0,0,0,0,0.979762080328227,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.33946505990805,1.06287460050841,2.72658681369805,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8568440610789,8.74337677768942,0,0,0,0.115233987555779,0.342976018874837,0,0.0657727735628491,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.491337269247072,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.6562723580335,19.5467523509362,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70547620162874,0,0,0.179060963239896,9.63932238344335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580024309752732,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0,0,1.67043704337145,1.23087398947712,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953619473882272,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,3.45731515171559,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0,0,0,0,0,0,0.979762080328227,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0.422624246717254,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0.33946505990805,1.06287460050841,2.72658681369805,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8568440610789,8.74337677768942,0,0,0,0.115233987555779,0.342976018874837,0,0.0657727735628491,0.118193840883968,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:130088354..130088379,- | |short_description=p@chr6:130088354..130088379,- | ||
}} | }} |
Latest revision as of 19:20, 30 July 2015
Short description: | p@chr6:130088354..130088379, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:130088354..130088379, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.44e-18 | 1 |
immature NK T cell | 4.44e-18 | 1 |
effector T cell | 4.44e-18 | 1 |
mature NK T cell | 4.44e-18 | 1 |
immature NK T cell stage IV | 4.44e-18 | 1 |
immature NK T cell stage I | 4.44e-18 | 1 |
immature NK T cell stage II | 4.44e-18 | 1 |
immature NK T cell stage III | 4.44e-18 | 1 |
multinucleate cell | 6.23e-18 | 1 |
myotube | 6.23e-18 | 1 |
uterine smooth muscle cell | 1.22e-17 | 1 |
mast cell | 1.61e-14 | 5 |
basophil mast progenitor cell | 1.61e-14 | 5 |
thymocyte | 1.03e-09 | 2 |
double negative thymocyte | 1.03e-09 | 2 |
double-positive, alpha-beta thymocyte | 1.03e-09 | 2 |
DN4 thymocyte | 1.03e-09 | 2 |
DN1 thymic pro-T cell | 1.03e-09 | 2 |
DN2 thymocyte | 1.03e-09 | 2 |
DN3 thymocyte | 1.03e-09 | 2 |
immature single positive thymocyte | 1.03e-09 | 2 |
early T lineage precursor | 1.03e-09 | 2 |
endocrine cell | 1.77e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.59e-34 | 2 |
regional part of epithalamus | 2.59e-34 | 2 |
secretory circumventricular organ | 2.59e-34 | 2 |
circumventricular organ | 2.59e-34 | 2 |
epithalamus | 2.59e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
diencephalon | 1.53e-10 | 7 |
future diencephalon | 1.53e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.79e-07 | 10 |