FFCP PHASE1:Hg19::chr6:163681762..163681767,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:163681762..163681767,+ | |||
|coexpression_cluster_id=C2292 | |||
|description=CAGE_peak_at_chr6:163681762..163681767,+ | |description=CAGE_peak_at_chr6:163681762..163681767,+ | ||
|id=chr6:163681762..163681767,+ | |id=chr6:163681762..163681767,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.66e-66;1!UBERON:0006238;2.40e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.09e-58!82;UBERON:0001049!1.08e-56!57;UBERON:0005068!1.08e-56!57;UBERON:0006241!1.08e-56!57;UBERON:0007135!1.08e-56!57;UBERON:0005743!6.23e-55!86;UBERON:0002616!1.16e-54!59;UBERON:0000955!5.36e-50!69;UBERON:0006238!5.36e-50!69;UBERON:0000073!2.09e-49!94;UBERON:0001016!2.09e-49!94;UBERON:0002780!1.94e-48!41;UBERON:0001890!1.94e-48!41;UBERON:0006240!1.94e-48!41;UBERON:0003080!3.13e-47!42;UBERON:0003075!2.15e-43!86;UBERON:0007284!2.15e-43!86;UBERON:0002346!2.74e-41!90;UBERON:0001893!2.45e-40!34;UBERON:0002020!5.61e-40!34;UBERON:0003528!5.61e-40!34;UBERON:0001869!3.92e-37!32;UBERON:0002791!4.30e-36!33;UBERON:0007023!7.11e-32!115;UBERON:0003056!1.13e-31!61;UBERON:0000956!2.05e-29!25;UBERON:0000203!2.05e-29!25;UBERON:0000033!4.97e-29!123;UBERON:0002619!1.32e-27!22;UBERON:0000153!1.72e-27!129;UBERON:0007811!1.72e-27!129;UBERON:0004121!8.48e-26!169;UBERON:0000924!4.21e-25!173;UBERON:0006601!4.21e-25!173;UBERON:0001950!1.01e-24!20;UBERON:0000988!3.12e-20!3;UBERON:0002680!5.03e-18!9;UBERON:0001895!5.03e-18!9;UBERON:0010092!5.03e-18!9;UBERON:0001897!2.21e-14!2;UBERON:0002148!4.62e-14!2;UBERON:0009662!4.62e-14!2;UBERON:0002360!6.89e-14!2;UBERON:0000094!6.89e-14!2;UBERON:0007645!6.89e-14!2;UBERON:0000025!8.57e-14!194;UBERON:0004733!1.74e-13!12;UBERON:0002028!1.74e-13!12;UBERON:0007277!1.74e-13!12;UBERON:0004732!1.95e-12!13;UBERON:0000349!2.34e-12!5;UBERON:0002308!7.15e-12!9;UBERON:0000125!7.15e-12!9;UBERON:0003076!9.34e-11!15;UBERON:0003057!9.34e-11!15;UBERON:0000200!1.26e-10!6;UBERON:0004111!3.01e-10!241;UBERON:0006331!1.12e-09!3;UBERON:0001894!2.45e-09!7;UBERON:0006222!2.45e-09!7;UBERON:0000477!6.43e-09!286;UBERON:0000483!8.03e-09!309;UBERON:0000119!1.08e-08!312;UBERON:0002336!1.77e-08!1;UBERON:0001018!1.77e-08!1;UBERON:0002473!1.77e-08!1;UBERON:0005340!1.77e-08!1;UBERON:0002316!1.77e-08!1;UBERON:0003544!1.77e-08!1;UBERON:0001020!1.77e-08!1;UBERON:0005970!1.77e-08!1;UBERON:0002437!1.77e-08!1;UBERON:0002581!2.71e-08!1;UBERON:0002902!3.11e-08!1;UBERON:0009899!3.11e-08!1;UBERON:0007190!3.83e-08!1;UBERON:0003112!4.11e-08!1;UBERON:0000032!4.11e-08!1;UBERON:0005253!4.11e-08!1;UBERON:0003128!4.11e-08!1;UBERON:0002241!4.11e-08!1;UBERON:0001703!4.11e-08!1;UBERON:0004761!4.11e-08!1;UBERON:0009617!4.11e-08!1;UBERON:0002022!4.71e-08!1;UBERON:0001871!5.41e-08!7;UBERON:0001882!5.79e-08!1;UBERON:0005403!5.79e-08!1;UBERON:0002298!6.41e-08!8;UBERON:0001874!7.10e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0000369!1.64e-07!4;UBERON:0002435!1.64e-07!4;UBERON:0000204!1.64e-07!4;UBERON:0010082!1.64e-07!4;UBERON:0000064!3.52e-07!219;UBERON:0002420!4.24e-07!9;UBERON:0007245!4.24e-07!9;UBERON:0010009!4.24e-07!9;UBERON:0010011!4.24e-07!9;UBERON:0000454!4.24e-07!9;UBERON:0000475!9.06e-07!365 | |ontology_enrichment_uberon=UBERON:0001017!9.09e-58!82;UBERON:0001049!1.08e-56!57;UBERON:0005068!1.08e-56!57;UBERON:0006241!1.08e-56!57;UBERON:0007135!1.08e-56!57;UBERON:0005743!6.23e-55!86;UBERON:0002616!1.16e-54!59;UBERON:0000955!5.36e-50!69;UBERON:0006238!5.36e-50!69;UBERON:0000073!2.09e-49!94;UBERON:0001016!2.09e-49!94;UBERON:0002780!1.94e-48!41;UBERON:0001890!1.94e-48!41;UBERON:0006240!1.94e-48!41;UBERON:0003080!3.13e-47!42;UBERON:0003075!2.15e-43!86;UBERON:0007284!2.15e-43!86;UBERON:0002346!2.74e-41!90;UBERON:0001893!2.45e-40!34;UBERON:0002020!5.61e-40!34;UBERON:0003528!5.61e-40!34;UBERON:0001869!3.92e-37!32;UBERON:0002791!4.30e-36!33;UBERON:0007023!7.11e-32!115;UBERON:0003056!1.13e-31!61;UBERON:0000956!2.05e-29!25;UBERON:0000203!2.05e-29!25;UBERON:0000033!4.97e-29!123;UBERON:0002619!1.32e-27!22;UBERON:0000153!1.72e-27!129;UBERON:0007811!1.72e-27!129;UBERON:0004121!8.48e-26!169;UBERON:0000924!4.21e-25!173;UBERON:0006601!4.21e-25!173;UBERON:0001950!1.01e-24!20;UBERON:0000988!3.12e-20!3;UBERON:0002680!5.03e-18!9;UBERON:0001895!5.03e-18!9;UBERON:0010092!5.03e-18!9;UBERON:0001897!2.21e-14!2;UBERON:0002148!4.62e-14!2;UBERON:0009662!4.62e-14!2;UBERON:0002360!6.89e-14!2;UBERON:0000094!6.89e-14!2;UBERON:0007645!6.89e-14!2;UBERON:0000025!8.57e-14!194;UBERON:0004733!1.74e-13!12;UBERON:0002028!1.74e-13!12;UBERON:0007277!1.74e-13!12;UBERON:0004732!1.95e-12!13;UBERON:0000349!2.34e-12!5;UBERON:0002308!7.15e-12!9;UBERON:0000125!7.15e-12!9;UBERON:0003076!9.34e-11!15;UBERON:0003057!9.34e-11!15;UBERON:0000200!1.26e-10!6;UBERON:0004111!3.01e-10!241;UBERON:0006331!1.12e-09!3;UBERON:0001894!2.45e-09!7;UBERON:0006222!2.45e-09!7;UBERON:0000477!6.43e-09!286;UBERON:0000483!8.03e-09!309;UBERON:0000119!1.08e-08!312;UBERON:0002336!1.77e-08!1;UBERON:0001018!1.77e-08!1;UBERON:0002473!1.77e-08!1;UBERON:0005340!1.77e-08!1;UBERON:0002316!1.77e-08!1;UBERON:0003544!1.77e-08!1;UBERON:0001020!1.77e-08!1;UBERON:0005970!1.77e-08!1;UBERON:0002437!1.77e-08!1;UBERON:0002581!2.71e-08!1;UBERON:0002902!3.11e-08!1;UBERON:0009899!3.11e-08!1;UBERON:0007190!3.83e-08!1;UBERON:0003112!4.11e-08!1;UBERON:0000032!4.11e-08!1;UBERON:0005253!4.11e-08!1;UBERON:0003128!4.11e-08!1;UBERON:0002241!4.11e-08!1;UBERON:0001703!4.11e-08!1;UBERON:0004761!4.11e-08!1;UBERON:0009617!4.11e-08!1;UBERON:0002022!4.71e-08!1;UBERON:0001871!5.41e-08!7;UBERON:0001882!5.79e-08!1;UBERON:0005403!5.79e-08!1;UBERON:0002298!6.41e-08!8;UBERON:0001874!7.10e-08!1;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1;UBERON:0000369!1.64e-07!4;UBERON:0002435!1.64e-07!4;UBERON:0000204!1.64e-07!4;UBERON:0010082!1.64e-07!4;UBERON:0000064!3.52e-07!219;UBERON:0002420!4.24e-07!9;UBERON:0007245!4.24e-07!9;UBERON:0010009!4.24e-07!9;UBERON:0010011!4.24e-07!9;UBERON:0000454!4.24e-07!9;UBERON:0000475!9.06e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;1.71e-66;1!UBERON:0011215;1.71e-66;1!UBERON:0001018;1.71e-66;1!UBERON:0002473;1.71e-66;1!UBERON:0005340;1.71e-66;1!UBERON:0003544;1.71e-66;1!UBERON:0005970;1.71e-66;1!UBERON:0002316;1.71e-66;1!UBERON:0001020;1.71e-66;1!UBERON:0002437;1.71e-66;1!UBERON:0005162;4.27e-34;2!UBERON:0000122;4.27e-34;2!UBERON:0001894;9.89e-11;7!UBERON:0000955;1.64e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.39e-66,1;UBERON:0011215,2.39e-66,1;UBERON:0001018,2.39e-66,1;UBERON:0002473,2.39e-66,1;UBERON:0005340,2.39e-66,1;UBERON:0003544,2.39e-66,1;UBERON:0005970,2.39e-66,1;UBERON:0002316,2.39e-66,1;UBERON:0001020,2.39e-66,1;UBERON:0002437,2.39e-66,1;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41 | |||
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|short_description=p@chr6:163681762..163681767,+ | |short_description=p@chr6:163681762..163681767,+ | ||
}} | }} |
Latest revision as of 21:53, 30 July 2015
Short description: | p@chr6:163681762..163681767, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:163681762..163681767, + |
Coexpression cluster: | C2292_corpus_brain_diencephalon_thalamus_parietal_cerebral_medulla |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.39e-66 | 1 |
central nervous system cell part cluster | 2.39e-66 | 1 |
axon tract | 2.39e-66 | 1 |
intercerebral commissure | 2.39e-66 | 1 |
dorsal telencephalic commissure | 2.39e-66 | 1 |
brain white matter | 2.39e-66 | 1 |
brain commissure | 2.39e-66 | 1 |
white matter | 2.39e-66 | 1 |
nervous system commissure | 2.39e-66 | 1 |
cerebral hemisphere white matter | 2.39e-66 | 1 |
multi cell component structure | 5.04e-34 | 2 |
neuron projection bundle | 5.04e-34 | 2 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |