FFCP PHASE1:Hg19::chr6:26923959..26923962,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:26923959..26923962,- | |||
|description=CAGE_peak_at_chr6:26923959..26923962,- | |description=CAGE_peak_at_chr6:26923959..26923962,- | ||
|id=chr6:26923959..26923962,- | |id=chr6:26923959..26923962,- | ||
|ontology_enrichment_celltype=CL:0000542!1.71e-15!53;CL:0000051!1.71e-15!53;CL:0000838!1.57e-14!52;CL:0002032!3.60e-07!165;CL:0000837!3.60e-07!165;CL:0000037!5.36e-07!172;CL:0000566!5.36e-07!172 | |ontology_enrichment_celltype=CL:0000542!1.71e-15!53;CL:0000051!1.71e-15!53;CL:0000838!1.57e-14!52;CL:0002032!3.60e-07!165;CL:0000837!3.60e-07!165;CL:0000037!5.36e-07!172;CL:0000566!5.36e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.05e-16;2!CL:0002127;7.97e-10;1!CL:0000911;7.97e-10;1!CL:0000814;7.97e-10;1!CL:0000817;1.32e-09;1!CL:0000785;1.32e-09;1!CL:0000819;1.32e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.15e-16,2;CL:0000817,5.72e-12,3;CL:0000838,3.37e-11,52;CL:0000542,5.81e-11,53;CL:0000051,5.81e-11,53;CL:0002127,7.98e-10,1;CL:0000914,7.98e-10,1;CL:0000911,7.98e-10,1;CL:0000814,7.98e-10,1;CL:0002042,7.98e-10,1;CL:0002039,7.98e-10,1;CL:0002040,7.98e-10,1;CL:0002041,7.98e-10,1;CL:0000819,1.03e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.90e-34!235;DOID:14566!1.16e-32!239;DOID:0050686!1.38e-19!137;DOID:0050687!2.42e-18!143;DOID:305!8.26e-17!106;DOID:2531!1.89e-15!51;DOID:0060083!1.89e-15!51;DOID:0060058!6.38e-15!10;DOID:1240!1.20e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.32e-09;1!DOID:8675;1.32e-09;1!DOID:2531;1.44e-09;51!DOID:0060083;1.44e-09;51!DOID:0060058;7.41e-08;10!DOID:1240;1.08e-07;39!DOID:4362;3.23e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.33e-14,51;DOID:0060083,2.33e-14,51;DOID:0050686,5.49e-12,137;DOID:0060073,1.03e-09,1;DOID:8675,1.03e-09,1;DOID:1240,1.89e-09,39;DOID:162,6.71e-09,235;DOID:14566,1.21e-08,239;DOID:0060058,6.15e-08,10;DOID:4362,4.29e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.05e-16;2!UBERON:0004801;1.05e-16;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.15e-16,2;UBERON:0004801,2.15e-16,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0.30120591877825,0,0.92960640696362,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,2.6487785964879,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38885320763105,0.788123040807709,0.646882724578552,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.743212700502875,2.01976898167023,1.28055318027145,3.50737800003409,0,0,0,0,0.561594356226918,0.456469358066384,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0,0.99921590399346,0,0.18714054040822,0,0,0.780103689942349,0,0,0,0,0,0,2.11486539543521,0.988823245360557,0.211125408127993,0,0,1.0077309914171,0.102268682502155,0.492339221844278,0,0.359473404589307,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0,0.341826167541004,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0.75901493089674,4.29128763247022,0,0.163232808159148,1.27217764290547,0.432777279484182,0,0,0,0,0,0.208843899010911,0,0,0,2.91927662745066,0.19566461893209,0,0,0,0,0,2.40517471063188,0.207376382794494,0,0,0,0,0,0,0,0,1.30588809870604,0,0,0.290268993867255,0.730893170861856,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0,0,1.00863292007874,0.114536596165916,0,0.14405479798815,0,0,0,0,2.3459590056354,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0.0984274815147488,0.254019996197353,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,2.13440553948281,0,0,0,0,0,0,0,0,0,0,0,0,1.97611631897944,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0.570930667089935,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.640150378164845,0,0.567515953566836,0,0,0,0,0.323474434190045,0.314531883711793,0.436838552768056,0.169732529954025,0,0.247871528518004,0,0,1.49837315502381,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0,0.231051332300676,0,0,0,0,0.40341013740704,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,1.77970243027311,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.467878926924211,1.98950775161368,0,0.22589216407792,0.549702583727146,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,1.41157948686277,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0.448527450322454,0,0,0,0,0,0.0717222053926763,0,0.569822880276821,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0.30120591877825,0,0.92960640696362,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,2.6487785964879,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38885320763105,0.788123040807709,0.646882724578552,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.743212700502875,2.01976898167023,1.28055318027145,3.50737800003409,0,0,0,0,0.561594356226918,0.456469358066384,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0,0.99921590399346,0,0.18714054040822,0,0,0.780103689942349,0,0,0,0,0,0,2.11486539543521,0.988823245360557,0.211125408127993,0,0,1.0077309914171,0.102268682502155,0.492339221844278,0,0.359473404589307,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0,0.341826167541004,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0.75901493089674,4.29128763247022,0,0.163232808159148,1.27217764290547,0.432777279484182,0,0,0,0,0,0.208843899010911,0,0,0,2.91927662745066,0.19566461893209,0,0,0,0,0,2.40517471063188,0.207376382794494,0,0,0,0,0,0,0,0,1.30588809870604,0,0,0.290268993867255,0.730893170861856,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0,0,1.00863292007874,0.114536596165916,0,0.14405479798815,0,0,0,0,2.3459590056354,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0.0984274815147488,0.254019996197353,0,0,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,2.13440553948281,0,0,0,0,0,0,0,0,0,0,0,0,1.97611631897944,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0.570930667089935,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.260994291965212,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.640150378164845,0,0.567515953566836,0,0,0,0,0.323474434190045,0.314531883711793,0.436838552768056,0.169732529954025,0,0.247871528518004,0,0,1.49837315502381,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0,0.231051332300676,0,0,0,0,0.40341013740704,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,1.77970243027311,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.467878926924211,1.98950775161368,0,0.22589216407792,0.549702583727146,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0.178553938605658,1.41157948686277,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.248298857183432,0.448527450322454,0,0,0,0,0,0.0717222053926763,0,0.569822880276821,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:26923959..26923962,- | |short_description=p@chr6:26923959..26923962,- | ||
}} | }} |
Latest revision as of 23:03, 30 July 2015
Short description: | p@chr6:26923959..26923962, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:26923959..26923962, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.15e-16 | 2 |
precursor B cell | 5.72e-12 | 3 |
lymphoid lineage restricted progenitor cell | 3.37e-11 | 52 |
lymphocyte | 5.81e-11 | 53 |
common lymphoid progenitor | 5.81e-11 | 53 |
innate effector T cell | 7.98e-10 | 1 |
immature NK T cell | 7.98e-10 | 1 |
effector T cell | 7.98e-10 | 1 |
mature NK T cell | 7.98e-10 | 1 |
immature NK T cell stage IV | 7.98e-10 | 1 |
immature NK T cell stage I | 7.98e-10 | 1 |
immature NK T cell stage II | 7.98e-10 | 1 |
immature NK T cell stage III | 7.98e-10 | 1 |
B-1 B cell | 1.03e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.15e-16 | 2 |
cervix epithelium | 2.15e-16 | 2 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.33e-14 | 51 |
immune system cancer | 2.33e-14 | 51 |
organ system cancer | 5.49e-12 | 137 |
lymphatic system cancer | 1.03e-09 | 1 |
lymphosarcoma | 1.03e-09 | 1 |
leukemia | 1.89e-09 | 39 |
cancer | 6.71e-09 | 235 |
disease of cellular proliferation | 1.21e-08 | 239 |
lymphoma | 6.15e-08 | 10 |
cervical cancer | 4.29e-07 | 5 |