FFCP PHASE1:Hg19::chr6:7581480..7581493,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:7581480..7581493,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7581480..7581493,+ | |description=CAGE_peak_at_chr6:7581480..7581493,+ | ||
|id=chr6:7581480..7581493,+ | |id=chr6:7581480..7581493,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.74e-16!254;CL:0000223!2.86e-13!59;CL:0002076!4.32e-12!43;CL:0002251!6.46e-11!21;CL:0000197!1.08e-07!6;CL:0000098!1.08e-07!6;CL:0002167!1.08e-07!6 | |ontology_enrichment_celltype=CL:0000066!1.74e-16!254;CL:0000223!2.86e-13!59;CL:0002076!4.32e-12!43;CL:0002251!6.46e-11!21;CL:0000197!1.08e-07!6;CL:0000098!1.08e-07!6;CL:0002167!1.08e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002623;4.87e-20;3!CL:0000622;2.00e-12;5!CL:0000154;1.65e-10;6!CL:0002535;2.23e-08;2!CL:0000150;2.68e-07;9!CL:0002251;4.66e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.37e-20,3;CL:0000622,2.12e-12,5;CL:0000154,1.73e-10,6;CL:0002535,2.87e-08,2;CL:0000150,2.77e-07,9;CL:0002251,4.62e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.34e-08;2!UBERON:0010056;1.34e-08;2 | |||
|ontology_enrichment_disease=DOID:305!1.02e-13!106;DOID:0050687!8.33e-10!143 | |ontology_enrichment_disease=DOID:305!1.02e-13!106;DOID:0050687!8.33e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.92e-15;1!DOID:3149;1.92e-15;1!DOID:3451;2.23e-08;2!DOID:4159;2.23e-08;2!DOID:0060122;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.66e-15,1;DOID:3149,3.66e-15,1;DOID:3451,3.08e-08,2;DOID:4159,3.08e-08,2;DOID:0060122,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.37e-10!169;UBERON:0000925!1.37e-10!169;UBERON:0006595!1.37e-10!169;UBERON:0001004!7.37e-10!72;UBERON:0001007!9.66e-10!155;UBERON:0001555!9.66e-10!155;UBERON:0007026!9.66e-10!155;UBERON:0002530!1.49e-08!59;UBERON:0004921!5.59e-08!129;UBERON:0004185!5.59e-08!129;UBERON:0001041!4.88e-07!98;UBERON:0000065!5.77e-07!53;UBERON:0002365!6.17e-07!31;UBERON:0002330!6.17e-07!31;UBERON:0000166!6.60e-07!21;UBERON:0000344!8.88e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!1.37e-10!169;UBERON:0000925!1.37e-10!169;UBERON:0006595!1.37e-10!169;UBERON:0001004!7.37e-10!72;UBERON:0001007!9.66e-10!155;UBERON:0001555!9.66e-10!155;UBERON:0007026!9.66e-10!155;UBERON:0002530!1.49e-08!59;UBERON:0004921!5.59e-08!129;UBERON:0004185!5.59e-08!129;UBERON:0001041!4.88e-07!98;UBERON:0000065!5.77e-07!53;UBERON:0002365!6.17e-07!31;UBERON:0002330!6.17e-07!31;UBERON:0000166!6.60e-07!21;UBERON:0000344!8.88e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;6.92e-16;1!UBERON:0002135;1.92e-15;1!UBERON:0000014;2.75e-15;4!UBERON:0001044;1.65e-10;6!UBERON:0003293;1.65e-10;6!UBERON:0003294;1.65e-10;6!UBERON:0010047;1.65e-10;6!UBERON:0003408;1.65e-10;6!UBERON:0000167;1.65e-10;6!UBERON:0000165;1.60e-08;28!UBERON:0002133;2.23e-08;2!UBERON:0006955;2.23e-08;2!UBERON:0004801;2.23e-08;2!UBERON:0000161;2.10e-07;19!UBERON:0000166;2.10e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,6.44e-16,1;UBERON:0002135,9.99e-16,1;UBERON:0000014,3.67e-15,4;UBERON:0000166,8.83e-11,22;UBERON:0001044,1.73e-10,6;UBERON:0003293,1.73e-10,6;UBERON:0003294,1.73e-10,6;UBERON:0010047,1.73e-10,6;UBERON:0000167,1.73e-10,6;UBERON:0000161,6.03e-10,36;UBERON:0002133,1.61e-08,2;UBERON:0003102,1.63e-08,99;UBERON:0006955,2.87e-08,2;UBERON:0004801,2.87e-08,2;UBERON:0000165,3.10e-08,29;UBERON:0000930,3.10e-08,29 | |||
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| ||
|short_description=p@chr6:7581480..7581493,+ | |short_description=p@chr6:7581480..7581493,+ | ||
}} | }} |
Latest revision as of 03:12, 31 July 2015
Short description: | p@chr6:7581480..7581493, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7581480..7581493, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.37e-20 | 3 |
acinar cell | 2.12e-12 | 5 |
protein secreting cell | 1.73e-10 | 6 |
epithelial cell of cervix | 2.87e-08 | 2 |
glandular epithelial cell | 2.77e-07 | 9 |
epithelial cell of alimentary canal | 4.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
surface | 6.44e-16 | 1 |
mitral valve | 9.99e-16 | 1 |
zone of skin | 3.67e-15 | 4 |
oral opening | 8.83e-11 | 22 |
saliva-secreting gland | 1.73e-10 | 6 |
gland of oral region | 1.73e-10 | 6 |
gland of foregut | 1.73e-10 | 6 |
oral gland | 1.73e-10 | 6 |
oral cavity | 1.73e-10 | 6 |
orifice | 6.03e-10 | 36 |
atrioventricular valve | 1.61e-08 | 2 |
surface structure | 1.63e-08 | 99 |
uterine epithelium | 2.87e-08 | 2 |
cervix epithelium | 2.87e-08 | 2 |
mouth | 3.10e-08 | 29 |
stomodeum | 3.10e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.66e-15 | 1 |
keratoacanthoma | 3.66e-15 | 1 |
skin carcinoma | 3.08e-08 | 2 |
skin cancer | 3.08e-08 | 2 |
integumentary system cancer | 3.08e-08 | 2 |