FFCP PHASE1:Hg19::chr7:128410484..128410495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:128410484..128410495,+ | |||
|coexpression_cluster_id=C1281 | |||
|description=CAGE_peak_at_chr7:128410484..128410495,+ | |description=CAGE_peak_at_chr7:128410484..128410495,+ | ||
|id=chr7:128410484..128410495,+ | |id=chr7:128410484..128410495,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.65e-26!180;CL:0000057!7.00e-14!75;CL:0000680!5.74e-13!57;CL:0000056!5.74e-13!57;CL:0000355!5.74e-13!57;CL:0000393!2.97e-12!60;CL:0000211!2.97e-12!60;CL:0000187!6.76e-12!54;CL:0000222!6.41e-11!119;CL:0000183!1.48e-10!59;CL:0000548!3.25e-10!679;CL:0000004!3.25e-10!679;CL:0000255!3.25e-10!679;CL:0000012!9.95e-10!682;CL:0002620!1.84e-09!23;CL:0000144!3.19e-09!625;CL:0000192!5.36e-09!42;CL:0000514!5.36e-09!42;CL:0002321!7.69e-09!248;CL:0000220!1.54e-08!246;CL:0002371!2.18e-07!591;CL:0000359!2.86e-07!32;CL:0002334!9.21e-07!12 | |ontology_enrichment_celltype=CL:0000055!3.65e-26!180;CL:0000057!7.00e-14!75;CL:0000680!5.74e-13!57;CL:0000056!5.74e-13!57;CL:0000355!5.74e-13!57;CL:0000393!2.97e-12!60;CL:0000211!2.97e-12!60;CL:0000187!6.76e-12!54;CL:0000222!6.41e-11!119;CL:0000183!1.48e-10!59;CL:0000548!3.25e-10!679;CL:0000004!3.25e-10!679;CL:0000255!3.25e-10!679;CL:0000012!9.95e-10!682;CL:0002620!1.84e-09!23;CL:0000144!3.19e-09!625;CL:0000192!5.36e-09!42;CL:0000514!5.36e-09!42;CL:0002321!7.69e-09!248;CL:0000220!1.54e-08!246;CL:0002371!2.18e-07!591;CL:0000359!2.86e-07!32;CL:0002334!9.21e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.72e-09;23!CL:0002334;4.84e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.04e-13,76;CL:0000048,2.26e-10,427;CL:0000723,6.05e-10,433;CL:0002334,1.96e-09,12;CL:0000034,2.15e-09,441;CL:0002620,3.75e-09,23;CL:0002579,5.12e-07,3;CL:0000153,9.66e-07,9;CL:0000447,9.66e-07,9;CL:0000136,9.86e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.73e-07,3;DOID:127,9.73e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!4.73e-12!70;UBERON:0002385!9.65e-12!63;UBERON:0001015!9.65e-12!63;UBERON:0000383!9.65e-12!63;UBERON:0001134!9.87e-12!61;UBERON:0002036!9.87e-12!61;UBERON:0003082!9.87e-12!61;UBERON:0000914!2.03e-11!83;UBERON:0002329!2.03e-11!83;UBERON:0003077!2.03e-11!83;UBERON:0003059!2.03e-11!83;UBERON:0007282!2.03e-11!83;UBERON:0009618!2.03e-11!83;UBERON:0007285!2.03e-11!83;UBERON:0000486!2.45e-10!82;UBERON:0004573!1.09e-08!33;UBERON:0004571!1.09e-08!33;UBERON:0000490!1.75e-08!138;UBERON:0005256!3.36e-08!143;UBERON:0001637!3.57e-08!42;UBERON:0003509!3.57e-08!42;UBERON:0004572!3.57e-08!42;UBERON:0004872!4.52e-08!84;UBERON:0002199!5.35e-07!45;UBERON:0002416!5.35e-07!45 | |ontology_enrichment_uberon=UBERON:0004290!4.73e-12!70;UBERON:0002385!9.65e-12!63;UBERON:0001015!9.65e-12!63;UBERON:0000383!9.65e-12!63;UBERON:0001134!9.87e-12!61;UBERON:0002036!9.87e-12!61;UBERON:0003082!9.87e-12!61;UBERON:0000914!2.03e-11!83;UBERON:0002329!2.03e-11!83;UBERON:0003077!2.03e-11!83;UBERON:0003059!2.03e-11!83;UBERON:0007282!2.03e-11!83;UBERON:0009618!2.03e-11!83;UBERON:0007285!2.03e-11!83;UBERON:0000486!2.45e-10!82;UBERON:0004573!1.09e-08!33;UBERON:0004571!1.09e-08!33;UBERON:0000490!1.75e-08!138;UBERON:0005256!3.36e-08!143;UBERON:0001637!3.57e-08!42;UBERON:0003509!3.57e-08!42;UBERON:0004572!3.57e-08!42;UBERON:0004872!4.52e-08!84;UBERON:0002199!5.35e-07!45;UBERON:0002416!5.35e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.55e-10;9!UBERON:0000042;6.55e-10;9!UBERON:0003688;3.00e-08;6!UBERON:0002358;3.00e-08;6!UBERON:0003684;3.00e-08;6!UBERON:0001178;3.00e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.30e-10,46;UBERON:0002416,6.30e-10,46;UBERON:0003688,2.06e-08,6;UBERON:0002358,2.06e-08,6;UBERON:0003684,2.06e-08,6;UBERON:0001178,2.06e-08,6;UBERON:0002097,6.38e-08,41;UBERON:0004457,3.39e-07,12;UBERON:0000042,3.39e-07,12;UBERON:0004573,8.06e-07,33;UBERON:0004571,8.06e-07,33 | |||
|phase1_expression=1.09007027562334,3.42560838225573,1.12763523276777,7.00513088471913,0,0.872338524100369,2.53299878168311,1.89515962028049,0,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,3.36162573225888,2.41077811209591,2.19093027116212,1.46379839637152,0,0,0,0,0.410623275218653,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.639312809217652,1.44575660953827,1.50401373190767,0.869079113764942,1.5905718941022,1.45990461090791,0,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0.694281003215189,0.56530794192401,0.838998872419812,0.550236083880135,0,0.516833518338658,0,0.66944122552934,0.402829317109147,0,0.976248230192678,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0.366403487860815,0,0,0,2.48485975847659,0.379891534993739,1.45650098894541,5.16305917347865,1.06400514659507,0,0,1.2333377420858,0,0.269421344139376,0.817309515567294,0.302714855289863,1.15235184896,0,0.936480230490962,0,0.597794722207204,0.469737994575059,0.323745888736263,0.280901613404497,1.02077085627447,0.491337269247072,0.309977343527296,0,0.989067717114227,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0.567160915800105,2.15267562826634,0.640672166455702,1.90738711043606,3.00091096084402,1.03052529238439,2.06112432036503,0.930584281657949,1.35021065793013,0.974370051611986,2.01947019395292,1.47279837827679,1.2931684545505,4.9701342952326,2.01504196455281,1.3564847384839,0.193260853163297,0,0,0.365921118388786,0.397589304964456,0.116193942869518,0.207322110030741,0,0,0,2.57296375277154,0,0.928735856063958,2.16563844500876,0.354920400119532,0.505754070234305,0,0.55146986366197,0,0,0.134831308160164,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.245976877086227,0.343135620597051,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0.433099343283221,0,0.380508304469197,0,0,0.246217006087397,0.702012795417713,0,0,0,0,0.268675568108545,0,0,0,0.088048434013226,0,0,0,0.253991577168676,0.381988425558278,1.17217447210047,0,0.514137463516618,0.300343057843917,0.285826432630578,0,0,0.51336800074665,0.904902010304444,0,1.690605505112,1.59562869950922,2.08014873822732,0.514414748524284,0,0,0.857867961948885,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,2.10833939483032,1.4377491329495,0,0,1.01346914667305,0.61642896765115,0.716243852959582,0,0,0.215627574859517,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,1.87173775377726,2.67643483195743,1.73472656537328,1.05427273493442,0,0,0,3.98535359121262,0,0.347534457872331,0,0.343143423810856,0,0,0.106727557803444,0.303127571446259,1.66435439510497,0.30239029332968,2.48107807818777,1.68808170616869,1.96462066103151,2.94720043288112,3.58195074346692,1.76939313257968,0,1.07946785661859,0.532685175939381,0.821271560138091,3.11552657510173,0.697262270759755,0.241718899183244,0.40101294060657,0.184161977871793,0.114814448164607,1.0925470080403,1.57349297951309,0,0.231046011313244,0,0,0.422206515571503,0,0.170093705276516,1.0795795805107,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.366277859273374,0.330037999682352,0,0,6.42735719376638,0.48335359146061,0.616194468458578,0.307007349452259,0.689182862422653,0.751941714077915,0.725083469571143,0.170453254832202,0.712256285173899,0.661139661443912,0.192190067365106,0,0.2023155617111,0,6.92587163027408,0,0,0.532306030317022,0.869932992075073,0.9266210955196,0.429374660225974,0,0.632758849437452,1.14378116354295,0,0.855877976067841,0.318203247925937,0.78494864019923,0.719489830333259,0.54907405947211,0.235624804691373,0.404364963146632,1.58510321173008,0.421258456238981,0,0.974853958525138,1.05650146756755,0.9554993798559,1.69686518344455,0,2.2054613741845,1.99031692572366,1.75380354101505,1.15755106853338,0.655894752046633,0.405820753925408,1.54911749049875,0,0.286822704408103,0.491245205065606,0,1.41904425628239,2.32218398827431,1.31717957183961,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0,4.3545542272653,0,0.179021174675609,0,0,2.3948309234694,1.11136990144637,0.969332746095218,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0.344743373241465,0.874813840149763,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0.139423744278603,0.0769502585037971,0.797594390929008,0,0.359030577639089,0,0.63800231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| ||
|short_description=p@chr7:128410484..128410495,+ | |short_description=p@chr7:128410484..128410495,+ | ||
}} | }} |
Latest revision as of 05:48, 31 July 2015
Short description: | p@chr7:128410484..128410495, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:128410484..128410495, + |
Coexpression cluster: | C1281_Smooth_Fibroblast_Adipocyte_Olfactory_leiomyoma_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.04e-13 | 76 |
multi fate stem cell | 2.26e-10 | 427 |
somatic stem cell | 6.05e-10 | 433 |
preadipocyte | 1.96e-09 | 12 |
stem cell | 2.15e-09 | 441 |
skin fibroblast | 3.75e-09 | 23 |
omentum preadipocyte | 5.12e-07 | 3 |
GAG secreting cell | 9.66e-07 | 9 |
carbohydrate secreting cell | 9.66e-07 | 9 |
fat cell | 9.86e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
integument | 6.30e-10 | 46 |
integumental system | 6.30e-10 | 46 |
omentum | 2.06e-08 | 6 |
peritoneum | 2.06e-08 | 6 |
abdominal cavity | 2.06e-08 | 6 |
visceral peritoneum | 2.06e-08 | 6 |
skin of body | 6.38e-08 | 41 |
cavity lining | 3.39e-07 | 12 |
serous membrane | 3.39e-07 | 12 |
systemic artery | 8.06e-07 | 33 |
systemic arterial system | 8.06e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.73e-07 | 3 |
leiomyoma | 9.73e-07 | 3 |