FFCP PHASE1:Hg19::chr7:135018332..135018336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:135018332..135018336,+ | |||
|description=CAGE_peak_at_chr7:135018332..135018336,+ | |description=CAGE_peak_at_chr7:135018332..135018336,+ | ||
|id=chr7:135018332..135018336,+ | |id=chr7:135018332..135018336,+ | ||
|ontology_enrichment_celltype=CL:0002202!1.45e-44!9;CL:0002632!1.45e-44!9;CL:0002368!1.08e-41!13;CL:0000068!1.39e-34!3;CL:0000069!1.39e-34!3;CL:0000307!1.39e-34!3;CL:0000377!1.39e-34!3;CL:0002328!3.85e-34!3;CL:0002076!1.09e-29!43;CL:0000244!7.87e-26!4;CL:0000731!7.87e-26!4;CL:0000223!2.96e-21!59;CL:0002336!1.75e-12!1;CL:0002261!1.75e-12!1;CL:0002170!1.75e-12!1;CL:0000066!6.34e-12!254;CL:0000220!9.85e-07!246 | |ontology_enrichment_celltype=CL:0002202!1.45e-44!9;CL:0002632!1.45e-44!9;CL:0002368!1.08e-41!13;CL:0000068!1.39e-34!3;CL:0000069!1.39e-34!3;CL:0000307!1.39e-34!3;CL:0000377!1.39e-34!3;CL:0002328!3.85e-34!3;CL:0002076!1.09e-29!43;CL:0000244!7.87e-26!4;CL:0000731!7.87e-26!4;CL:0000223!2.96e-21!59;CL:0002336!1.75e-12!1;CL:0002261!1.75e-12!1;CL:0002170!1.75e-12!1;CL:0000066!6.34e-12!254;CL:0000220!9.85e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.11e-84;3!CL:0002202;5.58e-78;9!CL:0002632;5.58e-78;9!CL:0002368;1.30e-77;13!CL:0002328;2.64e-38;3!CL:0002076;4.03e-17;42!CL:0000244;1.76e-08;4!CL:0000731;1.76e-08;4!CL:0000082;6.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.28e-84,3;CL:0000069,1.28e-84,3;CL:0000307,1.28e-84,3;CL:0000377,1.28e-84,3;CL:0002202,4.40e-78,9;CL:0002632,4.40e-78,9;CL:0002368,1.22e-77,13;CL:0002328,1.80e-38,3;CL:0002076,2.16e-24,42;CL:0000223,9.14e-18,58;CL:0000244,1.82e-08,4;CL:0000731,1.82e-08,4;CL:0000082,6.19e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000377;1.11e-84;3!CL:0000223;1.06e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!1.53e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!3.85e-34!3;UBERON:0002031!3.85e-34!3;UBERON:0007196!1.40e-28!14;UBERON:0001558!1.40e-28!14;UBERON:0002185!8.56e-26!4;UBERON:0000365!8.35e-21!5;UBERON:0003729!3.62e-20!5;UBERON:0005910!1.90e-17!6;UBERON:0003126!3.28e-15!7;UBERON:0001005!3.28e-15!7;UBERON:0000065!1.21e-12!53;UBERON:0000997!2.46e-12!1;UBERON:0005056!2.46e-12!1;UBERON:0000485!8.15e-12!9;UBERON:0003343!9.90e-12!4;UBERON:0004785!9.90e-12!4;UBERON:0005178!1.40e-11!34;UBERON:0002224!1.40e-11!34;UBERON:0001004!2.00e-11!72;UBERON:0000072!2.68e-11!46;UBERON:0005181!3.08e-11!35;UBERON:0004119!7.21e-11!169;UBERON:0000925!7.21e-11!169;UBERON:0006595!7.21e-11!169;UBERON:0008947!2.55e-10!38;UBERON:0003258!2.55e-10!38;UBERON:0000344!9.51e-09!12;UBERON:0000915!1.99e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;4.49e-47;15!UBERON:0001558;4.49e-47;15!UBERON:0004815;2.64e-38;3!UBERON:0002031;2.64e-38;3!UBERON:0003126;6.69e-37;7!UBERON:0001005;6.69e-37;7!UBERON:0002185;1.81e-23;5!UBERON:0005178;1.54e-21;34!UBERON:0002224;1.54e-21;34!UBERON:0000072;2.99e-19;37!UBERON:0000065;4.78e-19;44!UBERON:0005181;7.32e-19;35!UBERON:0000485;4.36e-17;7!UBERON:0000915;4.95e-08;52!UBERON:0005911;3.87e-07;36!UBERON:0000365;4.93e-07;5!UBERON:0004119;5.75e-07;158!UBERON:0004802;6.57e-07;19!UBERON:0000115;6.57e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,3.90e-47,15;UBERON:0001558,3.90e-47,15;UBERON:0004815,1.80e-38,3;UBERON:0002031,1.80e-38,3;UBERON:0003126,7.12e-37,7;UBERON:0001005,7.12e-37,7;UBERON:0002185,1.44e-23,5;UBERON:0005178,4.16e-21,34;UBERON:0002224,4.16e-21,34;UBERON:0005181,1.62e-20,35;UBERON:0000065,4.68e-19,54;UBERON:0008947,6.20e-19,38;UBERON:0003258,6.20e-19,38;UBERON:0000072,2.17e-15,47;UBERON:0001004,5.45e-14,74;UBERON:0000915,6.00e-14,52;UBERON:0000485,1.40e-13,9;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0001041,1.84e-08,87;UBERON:0005177,2.54e-07,101;UBERON:0000365,5.08e-07,5;UBERON:0004802,6.19e-07,19;UBERON:0000115,6.19e-07,19 | |||
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|short_description=p@chr7:135018332..135018336,+ | |short_description=p@chr7:135018332..135018336,+ | ||
}} | }} |
Latest revision as of 06:23, 31 July 2015
Short description: | p@chr7:135018332..135018336, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:135018332..135018336, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.28e-84 | 3 |
branched duct epithelial cell | 1.28e-84 | 3 |
tracheal epithelial cell | 1.28e-84 | 3 |
tracheoblast | 1.28e-84 | 3 |
epithelial cell of tracheobronchial tree | 4.40e-78 | 9 |
epithelial cell of lower respiratory tract | 4.40e-78 | 9 |
respiratory epithelial cell | 1.22e-77 | 13 |
bronchial epithelial cell | 1.80e-38 | 3 |
endo-epithelial cell | 2.16e-24 | 42 |
endodermal cell | 9.14e-18 | 58 |
transitional epithelial cell | 1.82e-08 | 4 |
urothelial cell | 1.82e-08 | 4 |
epithelial cell of lung | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 3.90e-47 | 15 |
lower respiratory tract | 3.90e-47 | 15 |
lower respiratory tract epithelium | 1.80e-38 | 3 |
epithelium of bronchus | 1.80e-38 | 3 |
trachea | 7.12e-37 | 7 |
respiratory airway | 7.12e-37 | 7 |
bronchus | 1.44e-23 | 5 |
thoracic cavity element | 4.16e-21 | 34 |
thoracic cavity | 4.16e-21 | 34 |
thoracic segment organ | 1.62e-20 | 35 |
respiratory tract | 4.68e-19 | 54 |
respiratory primordium | 6.20e-19 | 38 |
endoderm of foregut | 6.20e-19 | 38 |
segment of respiratory tract | 2.17e-15 | 47 |
respiratory system | 5.45e-14 | 74 |
thoracic segment of trunk | 6.00e-14 | 52 |
simple columnar epithelium | 1.40e-13 | 9 |
endoderm-derived structure | 8.31e-09 | 160 |
endoderm | 8.31e-09 | 160 |
presumptive endoderm | 8.31e-09 | 160 |
foregut | 1.84e-08 | 87 |
trunk region element | 2.54e-07 | 101 |
urothelium | 5.08e-07 | 5 |
respiratory tract epithelium | 6.19e-07 | 19 |
lung epithelium | 6.19e-07 | 19 |