FFCP PHASE1:Hg19::chr7:142498836..142498876,-: Difference between revisions
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|id=chr7:142498836..142498876,-
|short_description=p@chr7:142498836..142498876,-
|description=CAGE_peak_at_chr7:142498836..142498876,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:142498836..142498876,- | |||
|coexpression_cluster_id=C1420 | |||
|description=CAGE_peak_at_chr7:142498836..142498876,- | |||
|id=chr7:142498836..142498876,- | |||
|ontology_enrichment_celltype=CL:0000542!3.21e-39!53;CL:0000051!3.21e-39!53;CL:0000838!3.05e-38!52;CL:0000084!1.50e-34!25;CL:0000827!1.50e-34!25;CL:0000791!6.31e-28!18;CL:0000789!6.31e-28!18;CL:0002420!6.31e-28!18;CL:0002419!6.31e-28!18;CL:0000790!6.31e-28!18;CL:0002087!3.68e-21!119;CL:0000738!1.70e-18!140;CL:0000625!1.23e-17!11;CL:0002031!9.79e-16!124;CL:0000988!6.07e-14!182;CL:0000037!1.70e-13!172;CL:0000566!1.70e-13!172;CL:0002032!1.53e-11!165;CL:0000837!1.53e-11!165;CL:0000624!9.91e-11!6;CL:0000236!1.57e-09!14;CL:0000080!9.49e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.81e-53;25!CL:0000791;3.36e-49;18!CL:0000789;3.36e-49;18!CL:0002419;3.36e-49;18!CL:0000625;4.80e-34;11!CL:0000542;3.12e-25;53!CL:0000624;7.45e-20;6!CL:0000898;8.63e-11;3!CL:0000226;7.97e-10;3!CL:0000842;7.97e-10;3!CL:0000815;1.55e-07;2!CL:0000792;1.55e-07;2!CL:0002677;1.55e-07;2!CL:0002087;4.24e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.39e-53,25;CL:0000827,1.39e-53,25;CL:0000791,3.10e-49,18;CL:0000789,3.10e-49,18;CL:0002420,3.10e-49,18;CL:0002419,3.10e-49,18;CL:0000790,3.10e-49,18;CL:0000838,1.96e-42,52;CL:0000542,1.72e-41,53;CL:0000051,1.72e-41,53;CL:0000625,6.09e-34,11;CL:0002087,1.58e-20,115;CL:0000624,5.38e-20,6;CL:0000738,1.45e-17,136;CL:0002031,2.54e-15,120;CL:0000037,1.05e-12,168;CL:0000988,1.15e-11,177;CL:0000898,5.99e-11,3;CL:0000226,1.11e-09,3;CL:0000842,1.11e-09,3;CL:0002032,1.14e-09,161;CL:0000837,1.14e-09,161;CL:0000815,1.12e-07,2;CL:0000792,1.12e-07,2;CL:0002677,1.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.36e-49;18!CL:0000051;3.12e-25;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.76e-13!15;UBERON:0000179!2.76e-13!15;UBERON:0000463!2.76e-13!15;UBERON:0002370!1.52e-07!4;UBERON:0005058!1.52e-07!4;UBERON:0009113!1.52e-07!4;UBERON:0003295!1.52e-07!4;UBERON:0005562!1.52e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.09e-12;15!UBERON:0000179;1.09e-12;15!UBERON:0000463;1.09e-12;15!UBERON:0002370;5.95e-08;2!UBERON:0005058;5.95e-08;2!UBERON:0009113;5.95e-08;2!UBERON:0002390;1.21e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.25e-12,15;UBERON:0000179,1.25e-12,15;UBERON:0000463,1.25e-12,15;UBERON:0002370,1.55e-08,4;UBERON:0005058,1.55e-08,4;UBERON:0009113,1.55e-08,4;UBERON:0003295,1.55e-08,4;UBERON:0005562,1.55e-08,4 | |||
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| ||
|short_description=p@chr7:142498836..142498876,- | |||
}} | }} |
Latest revision as of 06:58, 31 July 2015
Short description: | p@chr7:142498836..142498876, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:142498836..142498876, - |
Coexpression cluster: | C1420_CD4_acute_Hodgkin_chronic_thymus_CD8_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.39e-53 | 25 |
pro-T cell | 1.39e-53 | 25 |
mature alpha-beta T cell | 3.10e-49 | 18 |
alpha-beta T cell | 3.10e-49 | 18 |
immature T cell | 3.10e-49 | 18 |
mature T cell | 3.10e-49 | 18 |
immature alpha-beta T cell | 3.10e-49 | 18 |
lymphoid lineage restricted progenitor cell | 1.96e-42 | 52 |
lymphocyte | 1.72e-41 | 53 |
common lymphoid progenitor | 1.72e-41 | 53 |
CD8-positive, alpha-beta T cell | 6.09e-34 | 11 |
nongranular leukocyte | 1.58e-20 | 115 |
CD4-positive, alpha-beta T cell | 5.38e-20 | 6 |
leukocyte | 1.45e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.54e-15 | 120 |
hematopoietic stem cell | 1.05e-12 | 168 |
hematopoietic cell | 1.15e-11 | 177 |
naive T cell | 5.99e-11 | 3 |
single nucleate cell | 1.11e-09 | 3 |
mononuclear cell | 1.11e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.14e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-09 | 161 |
regulatory T cell | 1.12e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.12e-07 | 2 |
naive regulatory T cell | 1.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.25e-12 | 15 |
haemolymphatic fluid | 1.25e-12 | 15 |
organism substance | 1.25e-12 | 15 |
thymus | 1.55e-08 | 4 |
hemolymphoid system gland | 1.55e-08 | 4 |
thymic region | 1.55e-08 | 4 |
pharyngeal gland | 1.55e-08 | 4 |
thymus primordium | 1.55e-08 | 4 |