FFCP PHASE1:Hg19::chr7:25400379..25400385,+: Difference between revisions
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|id=chr7:25400379..25400385,+
|short_description=p@chr7:25400379..25400385,+
|description=CAGE_peak_at_chr7:25400379..25400385,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:25400379..25400385,+ | |||
|coexpression_cluster_id=C850 | |||
|description=CAGE_peak_at_chr7:25400379..25400385,+ | |||
|id=chr7:25400379..25400385,+ | |||
|ontology_enrichment_celltype=CL:0000135!3.83e-16!3;CL:0000386!3.83e-16!3;CL:0000388!3.83e-16!3;CL:0002600!3.17e-11!2;CL:0000055!8.97e-09!180;CL:0000499!5.62e-08!27;CL:0002564!1.69e-07!3;CL:0002622!3.53e-07!3;CL:0000187!4.50e-07!54;CL:0000594!5.31e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000228;2.05e-29;1!CL:0002372;2.05e-29;1!CL:0002600;1.91e-15;2!CL:0002564;6.73e-11;3!CL:0000135;9.43e-11;3!CL:0000388;9.43e-11;3!CL:0000056;2.18e-08;4!CL:0000737;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.78e-29,1;CL:0002372,1.78e-29,1;CL:0002600,2.74e-15,2;CL:0002564,6.73e-11,3;CL:0000135,7.42e-11,3;CL:0000388,7.42e-11,3;CL:0000737,2.11e-08,4;CL:0000515,2.11e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000515;2.18e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!3.83e-16!3;UBERON:0000914!8.53e-10!83;UBERON:0002329!8.53e-10!83;UBERON:0003077!8.53e-10!83;UBERON:0003059!8.53e-10!83;UBERON:0007282!8.53e-10!83;UBERON:0009618!8.53e-10!83;UBERON:0007285!8.53e-10!83;UBERON:0002204!5.54e-08!167;UBERON:0004290!1.53e-07!70;UBERON:0002242!1.69e-07!3;UBERON:0003068!1.69e-07!3;UBERON:0002328!1.69e-07!3;UBERON:0004880!1.69e-07!3;UBERON:0001134!1.87e-07!61;UBERON:0002036!1.87e-07!61;UBERON:0003082!1.87e-07!61;UBERON:0000486!2.86e-07!82;UBERON:0002385!3.75e-07!63;UBERON:0001015!3.75e-07!63;UBERON:0000383!3.75e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;6.73e-11;3!UBERON:0007846;9.43e-11;3!UBERON:0000043;9.43e-11;3!UBERON:0007845;9.43e-11;3!UBERON:0001134;4.74e-08;16!UBERON:0002036;4.74e-08;16!UBERON:0011135;4.79e-07;5!UBERON:0002216;4.79e-07;5!UBERON:0011134;4.79e-07;5!UBERON:0002209;4.79e-07;5!UBERON:0002213;4.79e-07;5!UBERON:0007844;4.79e-07;5!UBERON:0011138;4.79e-07;5!UBERON:0001130;4.79e-07;5!UBERON:0001066;4.79e-07;5!UBERON:0001468;4.79e-07;5!UBERON:0002118;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,6.73e-11,3;UBERON:0003068,6.73e-11,3;UBERON:0002328,6.73e-11,3;UBERON:0004880,6.73e-11,3;UBERON:0007846,7.42e-11,3;UBERON:0000043,7.42e-11,3;UBERON:0007845,7.42e-11,3;UBERON:0011135,4.79e-07,5;UBERON:0002216,4.79e-07,5;UBERON:0011134,4.79e-07,5;UBERON:0002209,4.79e-07,5;UBERON:0002213,4.79e-07,5;UBERON:0005856,4.79e-07,5;UBERON:0005866,4.79e-07,5;UBERON:0005863,4.79e-07,5;UBERON:0007844,4.79e-07,5;UBERON:0011138,4.79e-07,5;UBERON:0001130,4.79e-07,5;UBERON:0001066,4.79e-07,5;UBERON:0001468,4.79e-07,5;UBERON:0002118,6.04e-07,5 | |||
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|short_description=p@chr7:25400379..25400385,+ | |||
}} | }} |
Latest revision as of 08:48, 31 July 2015
Short description: | p@chr7:25400379..25400385, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:25400379..25400385, + |
Coexpression cluster: | C850_Nucleus_Osteoblast_Melanocyte_Adipocyte_tenocyte_Placental_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.78e-29 | 1 |
myotube | 1.78e-29 | 1 |
smooth muscle cell of trachea | 2.74e-15 | 2 |
nucleus pulposus cell of intervertebral disc | 6.73e-11 | 3 |
fibrocyte | 7.42e-11 | 3 |
tendon cell | 7.42e-11 | 3 |
striated muscle cell | 2.11e-08 | 4 |
skeletal muscle myoblast | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 6.73e-11 | 3 |
axial mesoderm | 6.73e-11 | 3 |
notochord | 6.73e-11 | 3 |
chordamesoderm | 6.73e-11 | 3 |
dense regular connective tissue | 7.42e-11 | 3 |
tendon | 7.42e-11 | 3 |
regular connective tissue | 7.42e-11 | 3 |
intervertebral cartilage | 4.79e-07 | 5 |
symphysis | 4.79e-07 | 5 |
nonsynovial joint | 4.79e-07 | 5 |
fibrous joint | 4.79e-07 | 5 |
cartilaginous joint | 4.79e-07 | 5 |
developing mesenchymal condensation | 4.79e-07 | 5 |
pre-cartilage condensation | 4.79e-07 | 5 |
cartilaginous condensation | 4.79e-07 | 5 |
cartilage element | 4.79e-07 | 5 |
post-cranial axial skeletal system | 4.79e-07 | 5 |
vertebral column | 4.79e-07 | 5 |
intervertebral disk | 4.79e-07 | 5 |
intervertebral joint | 4.79e-07 | 5 |
right ovary | 6.04e-07 | 5 |