FFCP PHASE1:Hg19::chr8:124206334..124206344,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:124206334..124206344,+
|short_description=p@chr8:124206334..124206344,+
|description=CAGE_peak_at_chr8:124206334..124206344,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:124206334..124206344,+ | |||
|description=CAGE_peak_at_chr8:124206334..124206344,+ | |||
|id=chr8:124206334..124206344,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.71e-17!254;CL:0002076!7.01e-17!43;CL:0002368!3.43e-16!13;CL:0002328!2.52e-11!3;CL:0000223!2.99e-11!59;CL:0002621!3.57e-11!3;CL:0002150!8.38e-11!3;CL:0000861!8.38e-11!3;CL:0002202!1.01e-09!9;CL:0002632!1.01e-09!9;CL:0002159!1.98e-09!13;CL:0000575!1.19e-08!2;CL:1000415!3.29e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000575;3.96e-66;2!CL:0002231;1.85e-12;3!CL:0000307;2.59e-12;3!CL:0002159;1.99e-10;14!CL:0000077;6.15e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,5.53e-66,2;CL:0002231,1.85e-12,3;CL:0000068,3.24e-12,3;CL:0000069,3.24e-12,3;CL:0000307,3.24e-12,3;CL:0000377,3.24e-12,3;CL:0002159,2.08e-10,14;CL:0000076,5.93e-09,63;CL:0000077,5.54e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000377;2.59e-12;3 | |||
|ontology_enrichment_disease=DOID:1036!1.59e-10!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!2.52e-11!3;UBERON:0002031!2.52e-11!3;UBERON:0001949!3.57e-11!3;UBERON:0001004!5.10e-11!72;UBERON:0004119!1.47e-09!169;UBERON:0000925!1.47e-09!169;UBERON:0006595!1.47e-09!169;UBERON:0000161!1.65e-09!35;UBERON:0002185!1.36e-08!4;UBERON:0000065!3.91e-08!53;UBERON:0002294!1.09e-07!7;UBERON:0001173!1.09e-07!7;UBERON:0004912!1.09e-07!7;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0000166!5.86e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000964;9.87e-34;4!UBERON:0010409;9.87e-34;4!UBERON:0010313;3.47e-14;10!UBERON:0001801;1.99e-10;14!UBERON:0000019;6.15e-08;19!UBERON:0000047;6.15e-08;19!UBERON:0004088;6.15e-08;19!UBERON:0010230;6.15e-08;19!UBERON:0000970;1.38e-07;20!UBERON:0002104;2.86e-07;21!UBERON:0001456;2.86e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,1.17e-33,4;UBERON:0010409,1.17e-33,4;UBERON:0004348,1.17e-33,4;UBERON:0005427,1.17e-33,4;UBERON:0010313,3.71e-14,10;UBERON:0002342,3.71e-14,10;UBERON:0005062,3.71e-14,10;UBERON:0001801,2.08e-10,14;UBERON:0000019,1.42e-07,20;UBERON:0000047,1.42e-07,20;UBERON:0010312,1.42e-07,20;UBERON:0004088,1.42e-07,20;UBERON:0010230,1.42e-07,20;UBERON:0003072,1.42e-07,20;UBERON:0004128,1.42e-07,20;UBERON:0003071,1.42e-07,20;UBERON:0000970,2.95e-07,21;UBERON:0002104,2.95e-07,21;UBERON:0005157,4.59e-07,47;UBERON:0001456,5.74e-07,22 | |||
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| ||
|short_description=p@chr8:124206334..124206344,+ | |||
}} | }} |
Latest revision as of 14:34, 31 July 2015
Short description: | p@chr8:124206334..124206344, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:124206334..124206344, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 5.53e-66 | 2 |
epithelial cell of prostate | 1.85e-12 | 3 |
duct epithelial cell | 3.24e-12 | 3 |
branched duct epithelial cell | 3.24e-12 | 3 |
tracheal epithelial cell | 3.24e-12 | 3 |
tracheoblast | 3.24e-12 | 3 |
general ecto-epithelial cell | 2.08e-10 | 14 |
squamous epithelial cell | 5.93e-09 | 63 |
mesothelial cell | 5.54e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
cornea | 1.17e-33 | 4 |
eye surface | 1.17e-33 | 4 |
optic eminence | 1.17e-33 | 4 |
corneal primordium | 1.17e-33 | 4 |
neural crest-derived structure | 3.71e-14 | 10 |
neural crest | 3.71e-14 | 10 |
neural fold | 3.71e-14 | 10 |
anterior segment of eyeball | 2.08e-10 | 14 |
camera-type eye | 1.42e-07 | 20 |
simple eye | 1.42e-07 | 20 |
immature eye | 1.42e-07 | 20 |
ocular region | 1.42e-07 | 20 |
eyeball of camera-type eye | 1.42e-07 | 20 |
optic cup | 1.42e-07 | 20 |
optic vesicle | 1.42e-07 | 20 |
eye primordium | 1.42e-07 | 20 |
eye | 2.95e-07 | 21 |
visual system | 2.95e-07 | 21 |
epithelial fold | 4.59e-07 | 47 |
face | 5.74e-07 | 22 |