FFCP PHASE1:Hg19::chr8:128928739..128928758,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:128928739..128928758,+ | |||
|description=CAGE_peak_at_chr8:128928739..128928758,+ | |description=CAGE_peak_at_chr8:128928739..128928758,+ | ||
|id=chr8:128928739..128928758,+ | |id=chr8:128928739..128928758,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.58e-25!24;CL:0000071!1.32e-22!18;CL:0002546!1.32e-22!18;CL:0000115!4.60e-19!35;CL:0000213!2.91e-16!57;CL:0000215!2.91e-16!57;CL:0002078!2.76e-15!44;CL:1000413!1.83e-12!9;CL:0000222!1.97e-10!119;CL:0000076!1.43e-08!62;CL:0000128!3.39e-08!7;CL:0000126!3.39e-08!7;CL:0000127!3.39e-08!7;CL:0002453!3.39e-08!7;CL:0002544!4.78e-08!6;CL:0002543!2.90e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.58e-25!24;CL:0000071!1.32e-22!18;CL:0002546!1.32e-22!18;CL:0000115!4.60e-19!35;CL:0000213!2.91e-16!57;CL:0000215!2.91e-16!57;CL:0002078!2.76e-15!44;CL:1000413!1.83e-12!9;CL:0000222!1.97e-10!119;CL:0000076!1.43e-08!62;CL:0000128!3.39e-08!7;CL:0000126!3.39e-08!7;CL:0000127!3.39e-08!7;CL:0002453!3.39e-08!7;CL:0002544!4.78e-08!6;CL:0002543!2.90e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.33e-31;18!CL:0002139;1.78e-23;24!CL:0000115;1.33e-19;36!CL:1000413;2.70e-16;9!CL:0002078;2.91e-14;45!CL:0002544;3.36e-14;6!CL:0002144;1.55e-13;3!CL:0000213;2.18e-13;58!CL:0000215;2.18e-13;58!CL:0000342;1.30e-10;1!CL:0002565;1.30e-10;1!CL:0000228;2.74e-10;1!CL:0002372;2.74e-10;1!CL:0000056;6.83e-10;4!CL:0002188;4.37e-08;5!CL:0000076;1.40e-07;63!CL:0002543;3.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,8.70e-32,18;CL:0002546,8.70e-32,18;CL:0000115,7.20e-24,36;CL:0002139,1.30e-23,24;CL:0002078,8.34e-19,45;CL:0000213,2.98e-17,58;CL:0000215,2.98e-17,58;CL:1000413,1.71e-16,9;CL:0002544,2.39e-14,6;CL:0002144,1.60e-13,3;CL:0000222,2.31e-12,121;CL:0000342,1.43e-10,1;CL:0002565,1.43e-10,1;CL:0000076,1.55e-10,63;CL:0000228,3.01e-10,1;CL:0002372,3.01e-10,1;CL:0000515,6.25e-10,4;CL:0002188,5.41e-08,5;CL:0002543,3.89e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.33e-31;18!CL:0000515;6.83e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.32e-22!18;UBERON:0004638!1.32e-22!18;UBERON:0004852!1.32e-22!18;UBERON:0000487!4.52e-20!22;UBERON:0006914!5.32e-17!25;UBERON:0003915!1.83e-12!9;UBERON:0004700!1.83e-12!9;UBERON:0001917!1.83e-12!9;UBERON:0002049!3.49e-12!79;UBERON:0007798!3.49e-12!79;UBERON:0000055!1.19e-09!69;UBERON:0007625!1.07e-08!11;UBERON:0001981!6.35e-08!60;UBERON:0007500!6.35e-08!60;UBERON:0004537!6.35e-08!60;UBERON:0006965!6.35e-08!60;UBERON:0000488!1.88e-07!4;UBERON:0004535!5.81e-07!110;UBERON:0003914!7.01e-07!118 | |ontology_enrichment_uberon=UBERON:0001986!1.32e-22!18;UBERON:0004638!1.32e-22!18;UBERON:0004852!1.32e-22!18;UBERON:0000487!4.52e-20!22;UBERON:0006914!5.32e-17!25;UBERON:0003915!1.83e-12!9;UBERON:0004700!1.83e-12!9;UBERON:0001917!1.83e-12!9;UBERON:0002049!3.49e-12!79;UBERON:0007798!3.49e-12!79;UBERON:0000055!1.19e-09!69;UBERON:0007625!1.07e-08!11;UBERON:0001981!6.35e-08!60;UBERON:0007500!6.35e-08!60;UBERON:0004537!6.35e-08!60;UBERON:0006965!6.35e-08!60;UBERON:0000488!1.88e-07!4;UBERON:0004535!5.81e-07!110;UBERON:0003914!7.01e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.33e-31;18!UBERON:0001986;1.33e-31;18!UBERON:0004852;1.33e-31;18!UBERON:0000487;1.08e-25;22!UBERON:0006914;1.68e-22;25!UBERON:0000490;3.56e-20;33!UBERON:0003915;2.70e-16;9!UBERON:0004700;2.70e-16;9!UBERON:0001917;2.70e-16;9!UBERON:0010523;1.55e-13;3!UBERON:0001915;1.55e-13;3!UBERON:0001982;1.55e-13;3!UBERON:0002506;1.30e-10;1!UBERON:0001769;1.30e-10;1!UBERON:0007500;1.49e-10;56!UBERON:0001981;1.49e-10;56!UBERON:0004537;1.49e-10;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.70e-32,18;UBERON:0001986,8.70e-32,18;UBERON:0004852,8.70e-32,18;UBERON:0000487,7.64e-26,22;UBERON:0006914,1.25e-22,25;UBERON:0003915,1.71e-16,9;UBERON:0004700,1.71e-16,9;UBERON:0001917,1.71e-16,9;UBERON:0010523,1.60e-13,3;UBERON:0001915,1.60e-13,3;UBERON:0001982,1.60e-13,3;UBERON:0007500,2.26e-11,59;UBERON:0001981,2.26e-11,59;UBERON:0004537,2.26e-11,59;UBERON:0006965,2.26e-11,59;UBERON:0002506,1.43e-10,1;UBERON:0001769,1.43e-10,1;UBERON:0002049,2.78e-10,78;UBERON:0007798,2.78e-10,78;UBERON:0000055,1.07e-09,68;UBERON:0004872,1.03e-07,83;UBERON:0003914,1.06e-07,117;UBERON:0000490,5.89e-07,148;UBERON:0004535,6.31e-07,109 | |||
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| ||
|short_description=p@chr8:128928739..128928758,+ | |short_description=p@chr8:128928739..128928758,+ | ||
}} | }} |
Latest revision as of 14:57, 31 July 2015
Short description: | p@chr8:128928739..128928758, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128928739..128928758, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 8.70e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.70e-32 | 18 |
endothelial cell | 7.20e-24 | 36 |
endothelial cell of vascular tree | 1.30e-23 | 24 |
meso-epithelial cell | 8.34e-19 | 45 |
lining cell | 2.98e-17 | 58 |
barrier cell | 2.98e-17 | 58 |
endothelial cell of artery | 1.71e-16 | 9 |
aortic endothelial cell | 2.39e-14 | 6 |
capillary endothelial cell | 1.60e-13 | 3 |
mesodermal cell | 2.31e-12 | 121 |
pigment cell (sensu Vertebrata) | 1.43e-10 | 1 |
iris pigment epithelial cell | 1.43e-10 | 1 |
squamous epithelial cell | 1.55e-10 | 63 |
multinucleate cell | 3.01e-10 | 1 |
myotube | 3.01e-10 | 1 |
skeletal muscle myoblast | 6.25e-10 | 4 |
glomerular endothelial cell | 5.41e-08 | 5 |
vein endothelial cell | 3.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.70e-32 | 18 |
endothelium | 8.70e-32 | 18 |
cardiovascular system endothelium | 8.70e-32 | 18 |
simple squamous epithelium | 7.64e-26 | 22 |
squamous epithelium | 1.25e-22 | 25 |
endothelial tube | 1.71e-16 | 9 |
arterial system endothelium | 1.71e-16 | 9 |
endothelium of artery | 1.71e-16 | 9 |
microcirculatory vessel | 1.60e-13 | 3 |
endothelium of capillary | 1.60e-13 | 3 |
capillary | 1.60e-13 | 3 |
epithelial tube open at both ends | 2.26e-11 | 59 |
blood vessel | 2.26e-11 | 59 |
blood vasculature | 2.26e-11 | 59 |
vascular cord | 2.26e-11 | 59 |
iris epithelium | 1.43e-10 | 1 |
iris | 1.43e-10 | 1 |
vasculature | 2.78e-10 | 78 |
vascular system | 2.78e-10 | 78 |
vessel | 1.07e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 1.03e-07 | 83 |
epithelial tube | 1.06e-07 | 117 |
unilaminar epithelium | 5.89e-07 | 148 |
cardiovascular system | 6.31e-07 | 109 |