FFCP PHASE1:Hg19::chr8:144635648..144635661,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:144635648..144635661,- | |||
|coexpression_cluster_id=C4732 | |coexpression_cluster_id=C4732 | ||
|description=CAGE_peak_at_chr8:144635648..144635661,- | |description=CAGE_peak_at_chr8:144635648..144635661,- | ||
|id=chr8:144635648..144635661,- | |id=chr8:144635648..144635661,- | ||
|ontology_enrichment_celltype=CL:0000766!5.42e-28!76;CL:0000557!3.79e-24!71;CL:0002057!1.53e-23!42;CL:0000839!3.12e-23!70;CL:0002194!2.21e-22!63;CL:0000576!2.21e-22!63;CL:0000040!2.21e-22!63;CL:0000559!2.21e-22!63;CL:0000860!4.17e-22!45;CL:0002009!3.49e-21!65;CL:0000763!3.99e-21!112;CL:0000049!3.99e-21!112;CL:0000738!3.14e-18!140;CL:0002032!1.79e-17!165;CL:0000837!1.79e-17!165;CL:0000037!3.19e-17!172;CL:0000566!3.19e-17!172;CL:0002031!2.56e-16!124;CL:0000988!1.95e-15!182;CL:0002087!2.30e-15!119 | |ontology_enrichment_celltype=CL:0000766!5.42e-28!76;CL:0000557!3.79e-24!71;CL:0002057!1.53e-23!42;CL:0000839!3.12e-23!70;CL:0002194!2.21e-22!63;CL:0000576!2.21e-22!63;CL:0000040!2.21e-22!63;CL:0000559!2.21e-22!63;CL:0000860!4.17e-22!45;CL:0002009!3.49e-21!65;CL:0000763!3.99e-21!112;CL:0000049!3.99e-21!112;CL:0000738!3.14e-18!140;CL:0002032!1.79e-17!165;CL:0000837!1.79e-17!165;CL:0000037!3.19e-17!172;CL:0000566!3.19e-17!172;CL:0002031!2.56e-16!124;CL:0000988!1.95e-15!182;CL:0002087!2.30e-15!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-21;33!CL:0002057;2.98e-21;33!CL:0000775;4.94e-17;3!CL:0000576;3.93e-16;48!CL:0002619;1.31e-15;3!CL:0000473;1.51e-14;39!CL:0000234;1.51e-14;39!CL:0000094;8.14e-11;8!CL:0000766;1.42e-10;69!CL:0000763;1.52e-09;100!CL:0000081;7.05e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.82e-26,72;CL:0000557,3.43e-20,67;CL:0000763,1.31e-19,108;CL:0000049,1.31e-19,108;CL:0002194,3.90e-18,59;CL:0000576,3.90e-18,59;CL:0000040,3.90e-18,59;CL:0000559,3.90e-18,59;CL:0000839,4.56e-18,66;CL:0000860,8.23e-18,42;CL:0002057,8.23e-18,42;CL:0002009,1.95e-17,61;CL:0000775,4.71e-17,3;CL:0002619,1.05e-15,3;CL:0000473,3.05e-15,48;CL:0000234,3.05e-15,48;CL:0000037,3.05e-13,168;CL:0000738,4.74e-13,136;CL:0002032,9.58e-13,161;CL:0000837,9.58e-13,161;CL:0000988,2.70e-12,177;CL:0000094,7.47e-11,8;CL:0002031,1.61e-09,120;CL:0002087,7.43e-09,115;CL:0000081,6.64e-08,11;CL:0000134,2.70e-07,354;CL:0002320,4.98e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.58e-23!80;UBERON:0002390!5.62e-20!102;UBERON:0003061!5.62e-20!102;UBERON:0001474!6.37e-20!86;UBERON:0002193!2.93e-17!112;UBERON:0002405!6.30e-17!115;UBERON:0004765!3.60e-16!101;UBERON:0001434!3.60e-16!101;UBERON:0002204!2.08e-09!167;UBERON:0007023!1.16e-08!115;UBERON:0002308!9.50e-07!9;UBERON:0000125!9.50e-07!9 | |ontology_enrichment_uberon=UBERON:0002371!7.58e-23!80;UBERON:0002390!5.62e-20!102;UBERON:0003061!5.62e-20!102;UBERON:0001474!6.37e-20!86;UBERON:0002193!2.93e-17!112;UBERON:0002405!6.30e-17!115;UBERON:0004765!3.60e-16!101;UBERON:0001434!3.60e-16!101;UBERON:0002204!2.08e-09!167;UBERON:0007023!1.16e-08!115;UBERON:0002308!9.50e-07!9;UBERON:0000125!9.50e-07!9 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.64e-22,76;UBERON:0001474,7.64e-20,82;UBERON:0004765,1.06e-17,90;UBERON:0001434,2.60e-17,100;UBERON:0002405,5.40e-17,93;UBERON:0002390,6.57e-16,98;UBERON:0003061,6.57e-16,98;UBERON:0002193,4.85e-14,108;UBERON:0002204,1.21e-09,167;UBERON:0002384,2.31e-07,371 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0.553995408531877,0.200544447470142,0.434021741431704,1.11957737119962,2.91504299417082,1.80302897343931,0.290796477559129,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0,2.01384674625505,2.0492856522328,3.07426898855161,0.344745680736619,0,0,0,0,0.224723484445085,0.612167784741805,0.641858054152187,2.55734850319616,1.9791078011203,3.59034583718937,2.55734850319616,0,0.56738522469114,1.86846674698672,0.75374599577023,1.5644487552606,2.82345498116652,1.81619850790011,0.368277635987565,0.949387162322653,0.422510572623884,0.637812899895131,0.419317291016752,0.22465726229299,1.05123824989054,1.92870704036496,0,0.79566670879636,0.91332076882317,0,0,0,0.853460445133014,0,0,0,0,1.1384259382189,0,0,0,0,0.526768169550154,0,0,0,0.501559486172034,0,0,0,0.111410456885174,0.294605907474837,0,0.541607727530031,0.25618263945135,1.1705341280389,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0,0,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.675105328965065,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.264145302039678,0,1.29707958075265,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,5.24304916763028,11.966458368161,3.72973962092432,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.307007349452259,0,0.537101224341368,0.435050081742686,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47775344708365,0.658589785919804,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0.714695326373367,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0.561594356226918,0.912938716132769,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.879049075631364,0,0.334330152832435,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,1.02314474045374,0.394573622547734,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0,0,0,0,0,1.32686346755009,0,0,0,0,0.202203398942031,0,0,0,0,0,0,3.62972148145992,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0.799238438328521,0,0,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,0.410716136675979,3.83239764200917,0,0,0,0,0.717873024576814,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,0.314727528809989,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.339936274560377,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,1.28144895081234,0,0.414239055347196,0,0.395223263795889,0.243585196761792,0,0.544017803369474,0,1.22538230705385,0.655745261419609,0,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0,0.308801447160972,0.438568099157414,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0.345701962667338,0,0.135939465953663,0.0657727735628491,0,0.333694205676207,0.156986185701028,0.314231179832004,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0.15096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| ||
|short_description=p@chr8:144635648..144635661,- | |short_description=p@chr8:144635648..144635661,- | ||
}} | }} |
Latest revision as of 15:54, 31 July 2015
Short description: | p@chr8:144635648..144635661, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:144635648..144635661, - |
Coexpression cluster: | C4732_Hepatocyte_Neutrophils_CD14_granulocyte_small_Eosinophils_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.82e-26 | 72 |
granulocyte monocyte progenitor cell | 3.43e-20 | 67 |
myeloid cell | 1.31e-19 | 108 |
common myeloid progenitor | 1.31e-19 | 108 |
monopoietic cell | 3.90e-18 | 59 |
monocyte | 3.90e-18 | 59 |
monoblast | 3.90e-18 | 59 |
promonocyte | 3.90e-18 | 59 |
myeloid lineage restricted progenitor cell | 4.56e-18 | 66 |
classical monocyte | 8.23e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.23e-18 | 42 |
macrophage dendritic cell progenitor | 1.95e-17 | 61 |
neutrophil | 4.71e-17 | 3 |
adult endothelial progenitor cell | 1.05e-15 | 3 |
defensive cell | 3.05e-15 | 48 |
phagocyte | 3.05e-15 | 48 |
hematopoietic stem cell | 3.05e-13 | 168 |
leukocyte | 4.74e-13 | 136 |
hematopoietic oligopotent progenitor cell | 9.58e-13 | 161 |
hematopoietic multipotent progenitor cell | 9.58e-13 | 161 |
hematopoietic cell | 2.70e-12 | 177 |
granulocyte | 7.47e-11 | 8 |
hematopoietic lineage restricted progenitor cell | 1.61e-09 | 120 |
nongranular leukocyte | 7.43e-09 | 115 |
blood cell | 6.64e-08 | 11 |
mesenchymal cell | 2.70e-07 | 354 |
connective tissue cell | 4.98e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.64e-22 | 76 |
bone element | 7.64e-20 | 82 |
skeletal element | 1.06e-17 | 90 |
skeletal system | 2.60e-17 | 100 |
immune system | 5.40e-17 | 93 |
hematopoietic system | 6.57e-16 | 98 |
blood island | 6.57e-16 | 98 |
hemolymphoid system | 4.85e-14 | 108 |
musculoskeletal system | 1.21e-09 | 167 |
connective tissue | 2.31e-07 | 371 |