FFCP PHASE1:Hg19::chr9:139379145..139379159,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:139379145..139379159,- | |||
|coexpression_cluster_id=C1549 | |||
|description=CAGE_peak_at_chr9:139379145..139379159,- | |description=CAGE_peak_at_chr9:139379145..139379159,- | ||
|id=chr9:139379145..139379159,- | |id=chr9:139379145..139379159,- | ||
|ontology_enrichment_celltype=CL:0000066!7.53e-41!254;CL:0000223!9.60e-27!59;CL:0002076!1.48e-22!43;CL:0002368!1.05e-13!13;CL:0002251!1.75e-10!21;CL:0002159!3.39e-09!13;CL:0002202!4.86e-09!9;CL:0002632!4.86e-09!9;CL:0000076!9.75e-09!62;CL:0000082!7.88e-08!19;CL:0000220!1.75e-07!246;CL:0002321!2.82e-07!248 | |ontology_enrichment_celltype=CL:0000066!7.53e-41!254;CL:0000223!9.60e-27!59;CL:0002076!1.48e-22!43;CL:0002368!1.05e-13!13;CL:0002251!1.75e-10!21;CL:0002159!3.39e-09!13;CL:0002202!4.86e-09!9;CL:0002632!4.86e-09!9;CL:0000076!9.75e-09!62;CL:0000082!7.88e-08!19;CL:0000220!1.75e-07!246;CL:0002321!2.82e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.01e-28;13!CL:0002076;2.43e-22;42!CL:0002159;1.99e-16;14!CL:0002202;2.45e-15;9!CL:0002632;2.45e-15;9!CL:0000244;4.31e-15;4!CL:0000731;4.31e-15;4!CL:0000307;1.36e-12;3!CL:0002328;1.68e-12;3!CL:0002621;2.06e-11;3!CL:0000317;1.04e-08;2!CL:1000448;1.04e-08;2!CL:0002308;1.04e-08;2!CL:0002140;1.04e-08;2!CL:0000575;1.75e-08;2!CL:0002251;3.77e-08;20!CL:0000362;3.10e-07;9!CL:0002077;9.05e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.54e-28,13;CL:0002076,2.09e-28,42;CL:0000223,9.26e-27,58;CL:0000066,4.00e-23,253;CL:0002159,2.41e-16,14;CL:0002202,1.99e-15,9;CL:0002632,1.99e-15,9;CL:0000244,2.77e-15,4;CL:0000731,2.77e-15,4;CL:0002328,1.10e-12,3;CL:0000068,1.50e-12,3;CL:0000069,1.50e-12,3;CL:0000307,1.50e-12,3;CL:0000377,1.50e-12,3;CL:0002621,1.17e-11,3;CL:0000317,1.13e-08,2;CL:1000448,1.13e-08,2;CL:0002308,1.13e-08,2;CL:0002140,1.13e-08,2;CL:0002321,1.32e-08,250;CL:0000575,1.37e-08,2;CL:0002251,3.09e-08,20;CL:0002077,1.88e-07,34;CL:0000362,3.16e-07,9;CL:0000076,3.94e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;4.09e-17;58!CL:0000377;1.36e-12;3 | |||
|ontology_enrichment_disease=DOID:305!5.42e-28!106;DOID:0050687!3.51e-19!143;DOID:1749!1.29e-12!14;DOID:162!9.88e-09!235;DOID:14566!1.60e-08!239 | |ontology_enrichment_disease=DOID:305!5.42e-28!106;DOID:0050687!3.51e-19!143;DOID:1749!1.29e-12!14;DOID:162!9.88e-09!235;DOID:14566!1.60e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.94e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.12e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000486;4.72e-14;12!UBERON:0004815;1.68e-12;3!UBERON:0002031;1.68e-12;3!UBERON:0000365;4.28e-12;5!UBERON:0001949;2.06e-11;3!UBERON:0005911;2.23e-10;36!UBERON:0005910;4.30e-10;6!UBERON:0000485;5.24e-09;7!UBERON:0007196;6.40e-09;15!UBERON:0001558;6.40e-09;15!UBERON:0002419;1.04e-08;2!UBERON:0007771;1.04e-08;2!UBERON:0003297;1.04e-08;2!UBERON:0001821;1.04e-08;2!UBERON:0003487;1.04e-08;2!UBERON:0001820;1.04e-08;2!UBERON:0002365;1.26e-08;31!UBERON:0002330;1.26e-08;31!UBERON:0003929;2.06e-08;7!UBERON:0002185;1.17e-07;5!UBERON:0004807;2.07e-07;22!UBERON:0003350;2.28e-07;8 | |||
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| ||
|short_description=p@chr9:139379145..139379159,- | |short_description=p@chr9:139379145..139379159,- | ||
}} | }} |
Latest revision as of 00:19, 1 August 2015
Short description: | p@chr9:139379145..139379159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139379145..139379159, - |
Coexpression cluster: | C1549_breast_liver_Sebocyte_Hepatocyte_pancreas_Bronchial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.54e-28 | 13 |
endo-epithelial cell | 2.09e-28 | 42 |
endodermal cell | 9.26e-27 | 58 |
epithelial cell | 4.00e-23 | 253 |
general ecto-epithelial cell | 2.41e-16 | 14 |
epithelial cell of tracheobronchial tree | 1.99e-15 | 9 |
epithelial cell of lower respiratory tract | 1.99e-15 | 9 |
transitional epithelial cell | 2.77e-15 | 4 |
urothelial cell | 2.77e-15 | 4 |
bronchial epithelial cell | 1.10e-12 | 3 |
duct epithelial cell | 1.50e-12 | 3 |
branched duct epithelial cell | 1.50e-12 | 3 |
tracheal epithelial cell | 1.50e-12 | 3 |
tracheoblast | 1.50e-12 | 3 |
gingival epithelial cell | 1.17e-11 | 3 |
sebum secreting cell | 1.13e-08 | 2 |
epithelial cell of sweat gland | 1.13e-08 | 2 |
epithelial cell of skin gland | 1.13e-08 | 2 |
acinar cell of sebaceous gland | 1.13e-08 | 2 |
embryonic cell | 1.32e-08 | 250 |
corneal epithelial cell | 1.37e-08 | 2 |
epithelial cell of alimentary canal | 3.09e-08 | 20 |
ecto-epithelial cell | 1.88e-07 | 34 |
epidermal cell | 3.16e-07 | 9 |
squamous epithelial cell | 3.94e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.06e-15 | 160 |
endoderm | 4.06e-15 | 160 |
presumptive endoderm | 4.06e-15 | 160 |
endo-epithelium | 1.93e-13 | 82 |
lower respiratory tract epithelium | 1.10e-12 | 3 |
epithelium of bronchus | 1.10e-12 | 3 |
urothelium | 3.01e-12 | 5 |
gingival epithelium | 1.17e-11 | 3 |
transitional epithelium | 3.22e-10 | 6 |
respiratory system | 1.87e-09 | 74 |
tracheobronchial tree | 5.68e-09 | 15 |
lower respiratory tract | 5.68e-09 | 15 |
skin gland | 1.13e-08 | 2 |
epidermis gland | 1.13e-08 | 2 |
gland of integumental system | 1.13e-08 | 2 |
sebaceous gland | 1.13e-08 | 2 |
skin sebaceous gland | 1.13e-08 | 2 |
sweat gland | 1.13e-08 | 2 |
sweat gland placode | 1.13e-08 | 2 |
sebaceous gland placode | 1.13e-08 | 2 |
exocrine gland | 1.68e-08 | 31 |
exocrine system | 1.68e-08 | 31 |
digestive system | 3.87e-08 | 145 |
digestive tract | 3.87e-08 | 145 |
primitive gut | 3.87e-08 | 145 |
bronchus | 9.11e-08 | 5 |
gut epithelium | 1.78e-07 | 54 |
epithelium of mucosa | 1.99e-07 | 8 |
simple columnar epithelium | 4.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.12e-08 | 14 |