FFCP PHASE1:Hg19::chr9:16094653..16094654,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:16094653..16094654,+ | |||
|coexpression_cluster_id=C406 | |coexpression_cluster_id=C406 | ||
|description=CAGE_peak_at_chr9:16094653..16094654,+ | |description=CAGE_peak_at_chr9:16094653..16094654,+ | ||
|id=chr9:16094653..16094654,+ | |id=chr9:16094653..16094654,+ | ||
|ontology_enrichment_celltype=CL:0001014!2.61e-19!2;CL:0001016!2.61e-19!2;CL:0002166!1.17e-13!3;CL:1001319!4.75e-10!1;CL:1000600!4.75e-10!1;CL:0000453!2.83e-08!5;CL:0000066!1.54e-07!254;CL:0000197!4.13e-07!6;CL:0000098!4.13e-07!6;CL:0002167!4.13e-07!6;CL:0002159!4.83e-07!13;CL:0000840!4.95e-07!5;CL:0001029!4.95e-07!5;CL:0002077!6.14e-07!33 | |ontology_enrichment_celltype=CL:0001014!2.61e-19!2;CL:0001016!2.61e-19!2;CL:0002166!1.17e-13!3;CL:1001319!4.75e-10!1;CL:1000600!4.75e-10!1;CL:0000453!2.83e-08!5;CL:0000066!1.54e-07!254;CL:0000197!4.13e-07!6;CL:0000098!4.13e-07!6;CL:0002167!4.13e-07!6;CL:0002159!4.83e-07!13;CL:0000840!4.95e-07!5;CL:0001029!4.95e-07!5;CL:0002077!6.14e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002166;2.03e-66;3!CL:0002159;3.06e-15;14!CL:0000244;1.29e-13;4!CL:0000731;1.29e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.71e-66,3;CL:0002159,2.95e-15,14;CL:0000244,1.29e-13,4;CL:0000731,1.29e-13,4;CL:0002077,6.75e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!4.27e-16!9;UBERON:0001708!1.81e-10!4;UBERON:0001704!1.81e-10!4;UBERON:0004645!4.75e-10!1;UBERON:0001256!4.75e-10!1;UBERON:0001259!4.75e-10!1;UBERON:0000365!3.52e-08!5;UBERON:0008947!4.90e-08!38;UBERON:0003258!4.90e-08!38;UBERON:0001557!9.95e-08!19;UBERON:0000065!1.34e-07!53;UBERON:0002090!2.95e-07!6;UBERON:0005910!5.93e-07!6 | |ontology_enrichment_uberon=UBERON:0001737!4.27e-16!9;UBERON:0001708!1.81e-10!4;UBERON:0001704!1.81e-10!4;UBERON:0004645!4.75e-10!1;UBERON:0001256!4.75e-10!1;UBERON:0001259!4.75e-10!1;UBERON:0000365!3.52e-08!5;UBERON:0008947!4.90e-08!38;UBERON:0003258!4.90e-08!38;UBERON:0001557!9.95e-08!19;UBERON:0000065!1.34e-07!53;UBERON:0002090!2.95e-07!6;UBERON:0005910!5.93e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.52e-50;4!UBERON:0008895;3.52e-50;4!UBERON:0011159;2.01e-40;5!UBERON:0011137;4.48e-19;11!UBERON:0010323;4.48e-19;11!UBERON:0000075;1.77e-13;16!UBERON:0000365;3.60e-11;5!UBERON:0005910;1.57e-09;6!UBERON:0004765;1.05e-08;26!UBERON:0001434;3.41e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.11e-50,4;UBERON:0008895,3.11e-50,4;UBERON:0011159,1.81e-40,5;UBERON:0010188,5.98e-34,6;UBERON:0002539,5.98e-34,6;UBERON:0008816,5.98e-34,6;UBERON:0010323,4.28e-19,11;UBERON:0011137,2.95e-15,14;UBERON:0000075,1.72e-13,16;UBERON:0008814,4.07e-12,18;UBERON:0000365,3.60e-11,5;UBERON:0005910,1.57e-09,6 | |||
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|short_description=p@chr9:16094653..16094654,+ | |short_description=p@chr9:16094653..16094654,+ | ||
}} | }} |
Latest revision as of 00:54, 1 August 2015
Short description: | p@chr9:16094653..16094654, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:16094653..16094654, + |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.71e-66 | 3 |
general ecto-epithelial cell | 2.95e-15 | 14 |
transitional epithelial cell | 1.29e-13 | 4 |
urothelial cell | 1.29e-13 | 4 |
ecto-epithelial cell | 6.75e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.11e-50 | 4 |
splanchnocranium | 3.11e-50 | 4 |
primary subdivision of cranial skeletal system | 1.81e-40 | 5 |
protuberance | 5.98e-34 | 6 |
pharyngeal arch | 5.98e-34 | 6 |
embryonic head | 5.98e-34 | 6 |
cranial skeletal system | 4.28e-19 | 11 |
axial skeletal system | 2.95e-15 | 14 |
subdivision of skeletal system | 1.72e-13 | 16 |
pharyngeal arch system | 4.07e-12 | 18 |
urothelium | 3.60e-11 | 5 |
transitional epithelium | 1.57e-09 | 6 |