FFCP PHASE1:Hg19::chrX:8472470..8472482,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:8472470..8472482,- | |||
|coexpression_cluster_id=C4441 | |coexpression_cluster_id=C4441 | ||
|description=CAGE_peak_at_chrX:8472470..8472482,- | |description=CAGE_peak_at_chrX:8472470..8472482,- | ||
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|ontology_enrichment_celltype=CL:0002594!3.55e-16!4;CL:0000187!1.29e-14!54;CL:0000222!1.49e-14!119;CL:0000680!1.19e-13!57;CL:0000056!1.19e-13!57;CL:0000355!1.19e-13!57;CL:0000183!4.61e-13!59;CL:0000393!8.76e-13!60;CL:0000211!8.76e-13!60;CL:0000192!9.54e-13!42;CL:0000514!9.54e-13!42;CL:0000077!1.54e-12!19;CL:0000359!2.49e-10!32;CL:0002588!6.85e-09!2 | |ontology_enrichment_celltype=CL:0002594!3.55e-16!4;CL:0000187!1.29e-14!54;CL:0000222!1.49e-14!119;CL:0000680!1.19e-13!57;CL:0000056!1.19e-13!57;CL:0000355!1.19e-13!57;CL:0000183!4.61e-13!59;CL:0000393!8.76e-13!60;CL:0000211!8.76e-13!60;CL:0000192!9.54e-13!42;CL:0000514!9.54e-13!42;CL:0000077!1.54e-12!19;CL:0000359!2.49e-10!32;CL:0002588!6.85e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000077;6.45e-31;19!CL:0002568;3.16e-18;1!CL:0002097;1.57e-09;2!CL:0000213;1.14e-07;58!CL:0000215;1.14e-07;58!CL:0002586;6.69e-07;3!CL:0000174;9.11e-07;3 | |ontology_enrichment_celltype_v019=CL:0000077;6.45e-31;19!CL:0002568;3.16e-18;1!CL:0002097;1.57e-09;2!CL:0000213;1.14e-07;58!CL:0000215;1.14e-07;58!CL:0002586;6.69e-07;3!CL:0000174;9.11e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,6.45e-31,19;CL:0002568,3.16e-18,1;CL:0000213,4.78e-10,58;CL:0000215,4.78e-10,58;CL:0002097,1.33e-09,2;CL:0000076,3.12e-09,63;CL:0002586,6.50e-07,3;CL:0000174,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.57e-09!14;DOID:193!2.69e-07!29 | |ontology_enrichment_disease=DOID:2394!1.57e-09!14;DOID:193!2.69e-07!29 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;5.72e-07;11!UBERON:0001781;6.69e-07;3!UBERON:0001782;6.69e-07;3!UBERON:0002369;9.11e-07;3!UBERON:0001235;9.11e-07;3!UBERON:0006858;9.11e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007625;5.72e-07;11!UBERON:0001781;6.69e-07;3!UBERON:0001782;6.69e-07;3!UBERON:0002369;9.11e-07;3!UBERON:0001235;9.11e-07;3!UBERON:0006858;9.11e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.47e-07,11;UBERON:0001782,6.50e-07,3;UBERON:0005424,6.50e-07,3;UBERON:0002369,8.15e-07,3;UBERON:0001235,8.15e-07,3;UBERON:0006858,8.15e-07,3 | |||
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|short_description=p@chrX:8472470..8472482,- | |short_description=p@chrX:8472470..8472482,- | ||
}} | }} |
Latest revision as of 09:47, 1 August 2015
Short description: | p@chrX:8472470..8472482, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:8472470..8472482, - |
Coexpression cluster: | C4441_Mesothelial_Mesenchymal_Lens_Fibroblast_mesenchymal_Retinal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 6.45e-31 | 19 |
mesenchymal stem cell of Wharton's jelly | 3.16e-18 | 1 |
lining cell | 4.78e-10 | 58 |
barrier cell | 4.78e-10 | 58 |
cortical cell of adrenal gland | 1.33e-09 | 2 |
squamous epithelial cell | 3.12e-09 | 63 |
retinal pigment epithelial cell | 6.50e-07 | 3 |
steroid hormone secreting cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 5.47e-07 | 11 |
pigmented layer of retina | 6.50e-07 | 3 |
presumptive retinal pigmented epithelium | 6.50e-07 | 3 |
adrenal gland | 8.15e-07 | 3 |
adrenal cortex | 8.15e-07 | 3 |
adrenal/interrenal gland | 8.15e-07 | 3 |