FFCP PHASE1:Mm9::chr5:137546998..137547007,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=214 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:137546998..137547007,- | |||
|description=CAGE_peak_at_chr5:137546998..137547007,- | |description=CAGE_peak_at_chr5:137546998..137547007,- | ||
|id=chr5:137546998..137547007,- | |id=chr5:137546998..137547007,- | ||
|ontology_enrichment_celltype=CL:0000680!8.42e-20!6;CL:0000183!8.42e-20!6;CL:0000187!8.42e-20!6;CL:0000056!8.42e-20!6;CL:0000222!6.75e-17!7;CL:0000355!5.09e-13!9;CL:0002494!2.16e-11!3;CL:0000737!2.16e-11!3;CL:0000746!2.16e-11!3;CL:0000513!2.16e-11!3;CL:0000349!5.94e-11!3;CL:0000351!5.94e-11!3;CL:0000192!4.54e-10!3;CL:0000359!4.54e-10!3;CL:0002539!4.54e-10!3;CL:0000514!4.54e-10!3;CL:0000055!9.50e-09!50;CL:0000548!6.63e-08!115;CL:0000004!6.63e-08!115;CL:0000255!6.63e-08!115;CL:0002321!7.77e-08!70;CL:0000220!7.77e-08!70;CL:0002604!7.82e-08!2;CL:0002605!7.82e-08!2;CL:0002371!1.33e-07!118;CL:0000144!2.57e-07!121;CL:0000012!2.57e-07!121;CL:0000325!4.76e-07!2;CL:0000217!4.76e-07!2;CL:0000328!4.76e-07!2;CL:0002573!4.76e-07!2;CL:0002376!4.76e-07!2;CL:0000218!4.76e-07!2;CL:0000692!4.76e-07!2;CL:0002377!4.76e-07!2;CL:0002375!4.76e-07!2 | |ontology_enrichment_celltype=CL:0000680!8.42e-20!6;CL:0000183!8.42e-20!6;CL:0000187!8.42e-20!6;CL:0000056!8.42e-20!6;CL:0000222!6.75e-17!7;CL:0000355!5.09e-13!9;CL:0002494!2.16e-11!3;CL:0000737!2.16e-11!3;CL:0000746!2.16e-11!3;CL:0000513!2.16e-11!3;CL:0000349!5.94e-11!3;CL:0000351!5.94e-11!3;CL:0000192!4.54e-10!3;CL:0000359!4.54e-10!3;CL:0002539!4.54e-10!3;CL:0000514!4.54e-10!3;CL:0000055!9.50e-09!50;CL:0000548!6.63e-08!115;CL:0000004!6.63e-08!115;CL:0000255!6.63e-08!115;CL:0002321!7.77e-08!70;CL:0000220!7.77e-08!70;CL:0002604!7.82e-08!2;CL:0002605!7.82e-08!2;CL:0002371!1.33e-07!118;CL:0000144!2.57e-07!121;CL:0000012!2.57e-07!121;CL:0000325!4.76e-07!2;CL:0000217!4.76e-07!2;CL:0000328!4.76e-07!2;CL:0002573!4.76e-07!2;CL:0002376!4.76e-07!2;CL:0000218!4.76e-07!2;CL:0000692!4.76e-07!2;CL:0002377!4.76e-07!2;CL:0002375!4.76e-07!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.28e-24,3;CL:0000737,2.28e-24,3;CL:0000746,2.28e-24,3;CL:0000513,2.28e-24,3;CL:0000680,9.45e-13,6;CL:0000187,9.45e-13,6;CL:0000056,9.45e-13,6;CL:0000222,4.44e-11,7;CL:0000355,7.68e-09,9;CL:0000349,4.77e-07,3;CL:0000351,4.77e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002329!4.69e-14!11;UBERON:0003077!4.69e-14!11;UBERON:0003059!4.69e-14!11;UBERON:0007282!4.69e-14!11;UBERON:0009618!4.69e-14!11;UBERON:0007285!4.69e-14!11;UBERON:0001134!5.09e-13!9;UBERON:0002036!5.09e-13!9;UBERON:0002385!5.09e-13!9;UBERON:0000486!5.09e-13!9;UBERON:0001015!5.09e-13!9;UBERON:0004290!5.09e-13!9;UBERON:0003082!5.09e-13!9;UBERON:0000383!1.16e-11!10;UBERON:0000358!5.94e-11!3;UBERON:0000307!5.94e-11!3;UBERON:0001135!4.54e-10!3;UBERON:0004237!4.54e-10!3;UBERON:0004695!4.54e-10!3;UBERON:0002111!4.54e-10!3;UBERON:0004178!4.54e-10!3;UBERON:0000914!8.76e-09!17;UBERON:0001987!3.29e-08!2;UBERON:0003124!3.29e-08!2;UBERON:0004340!3.29e-08!2;UBERON:0000947!1.14e-07!4;UBERON:0001637!1.14e-07!4;UBERON:0003509!1.14e-07!4;UBERON:0004573!1.14e-07!4;UBERON:0004571!1.14e-07!4;UBERON:0010191!1.14e-07!4;UBERON:0004572!1.14e-07!4;UBERON:0002204!4.23e-07!32;UBERON:0004872!7.27e-07!33 | |ontology_enrichment_uberon=UBERON:0002329!4.69e-14!11;UBERON:0003077!4.69e-14!11;UBERON:0003059!4.69e-14!11;UBERON:0007282!4.69e-14!11;UBERON:0009618!4.69e-14!11;UBERON:0007285!4.69e-14!11;UBERON:0001134!5.09e-13!9;UBERON:0002036!5.09e-13!9;UBERON:0002385!5.09e-13!9;UBERON:0000486!5.09e-13!9;UBERON:0001015!5.09e-13!9;UBERON:0004290!5.09e-13!9;UBERON:0003082!5.09e-13!9;UBERON:0000383!1.16e-11!10;UBERON:0000358!5.94e-11!3;UBERON:0000307!5.94e-11!3;UBERON:0001135!4.54e-10!3;UBERON:0004237!4.54e-10!3;UBERON:0004695!4.54e-10!3;UBERON:0002111!4.54e-10!3;UBERON:0004178!4.54e-10!3;UBERON:0000914!8.76e-09!17;UBERON:0001987!3.29e-08!2;UBERON:0003124!3.29e-08!2;UBERON:0004340!3.29e-08!2;UBERON:0000947!1.14e-07!4;UBERON:0001637!1.14e-07!4;UBERON:0003509!1.14e-07!4;UBERON:0004573!1.14e-07!4;UBERON:0004571!1.14e-07!4;UBERON:0010191!1.14e-07!4;UBERON:0004572!1.14e-07!4;UBERON:0002204!4.23e-07!32;UBERON:0004872!7.27e-07!33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,7.56e-10,2;UBERON:0003124,7.56e-10,2;UBERON:0004340,7.56e-10,2;UBERON:0001134,7.68e-09,9;UBERON:0002036,7.68e-09,9;UBERON:0002385,7.68e-09,9;UBERON:0000486,7.68e-09,9;UBERON:0007503,7.68e-09,9;UBERON:0001015,7.68e-09,9;UBERON:0002329,7.68e-09,9;UBERON:0003082,7.68e-09,9;UBERON:0003059,7.68e-09,9;UBERON:0007282,7.68e-09,9;UBERON:0004290,7.68e-09,9;UBERON:0009618,7.68e-09,9;UBERON:0000383,4.71e-08,10;UBERON:0007524,2.08e-07,11;UBERON:0003077,2.08e-07,11;UBERON:0007285,2.08e-07,11;UBERON:0000358,4.77e-07,3;UBERON:0000307,4.77e-07,3;UBERON:0007010,4.77e-07,3;UBERON:0005631,5.46e-07,3;UBERON:0000478,5.46e-07,3;UBERON:0000158,5.46e-07,3 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.550640256485045,0,0,0.439372365468944,0.58328969722285,0,0,0,0,0,4.3734104126111,0.286533439938757,2.06268836910977,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,3.39985666853875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809621403349789,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,1.67884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.550640256485045,0,0,0.439372365468944,0.58328969722285,0,0,0,0,0,4.3734104126111,0.286533439938757,2.06268836910977,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,3.39985666853875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809621403349789,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.0591603543191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,1.67884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:137546998..137547007,- | |short_description=p@chr5:137546998..137547007,- | ||
}} | }} |
Latest revision as of 20:56, 3 August 2015
Short description: | p@chr5:137546998..137547007, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:137546998..137547007, - |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.28e-24 | 3 |
striated muscle cell | 2.28e-24 | 3 |
cardiac muscle cell | 2.28e-24 | 3 |
cardiac muscle myoblast | 2.28e-24 | 3 |
muscle precursor cell | 9.45e-13 | 6 |
muscle cell | 9.45e-13 | 6 |
myoblast | 9.45e-13 | 6 |
mesodermal cell | 4.44e-11 | 7 |
multi-potent skeletal muscle stem cell | 7.68e-09 | 9 |
extraembryonic cell | 4.77e-07 | 3 |
trophoblast cell | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
placenta | 7.56e-10 | 2 |
chorion | 7.56e-10 | 2 |
allantois | 7.56e-10 | 2 |
skeletal muscle tissue | 7.68e-09 | 9 |
striated muscle tissue | 7.68e-09 | 9 |
muscle tissue | 7.68e-09 | 9 |
multilaminar epithelium | 7.68e-09 | 9 |
epithelial vesicle | 7.68e-09 | 9 |
musculature | 7.68e-09 | 9 |
somite | 7.68e-09 | 9 |
myotome | 7.68e-09 | 9 |
presomitic mesoderm | 7.68e-09 | 9 |
presumptive segmental plate | 7.68e-09 | 9 |
dermomyotome | 7.68e-09 | 9 |
trunk paraxial mesoderm | 7.68e-09 | 9 |
musculature of body | 4.71e-08 | 10 |
dense mesenchyme tissue | 2.08e-07 | 11 |
paraxial mesoderm | 2.08e-07 | 11 |
presumptive paraxial mesoderm | 2.08e-07 | 11 |
blastocyst | 4.77e-07 | 3 |
blastula | 4.77e-07 | 3 |
cleaving embryo | 4.77e-07 | 3 |
extraembryonic membrane | 5.46e-07 | 3 |
extraembryonic structure | 5.46e-07 | 3 |
membranous layer | 5.46e-07 | 3 |