Personal tools

FFCP PHASE1:Mm9::chr10:126604039..126604059,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr10:126604039..126604059,- |short_description=p@chr10:126604039..126604059,- |description=CAGE_peak_at_chr10:126604039..126604059,- |association_with_transcri...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:126604039..126604059,-
|DHSsupport=NA
|short_description=p@chr10:126604039..126604059,-
|DPIdataset=NA
|description=CAGE_peak_at_chr10:126604039..126604059,-
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=474
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr10:126604039..126604059,-
|description=CAGE_peak_at_chr10:126604039..126604059,-
|id=chr10:126604039..126604059,-
|ontology_enrichment_celltype=CL:0002563!2.38e-09!9;CL:0002251!2.38e-09!9;CL:0000075!8.85e-07!7
|ontology_enrichment_celltype_v019_2=CL:0002563,1.48e-15,9;CL:0002251,1.48e-15,9;CL:0002250,3.40e-10,3;CL:0000066,5.57e-10,25;CL:0000682,3.37e-09,3;CL:0002076,6.64e-09,15;CL:0000239,7.87e-08,6;CL:0000677,7.87e-08,6;CL:0000584,7.87e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.14e-28!59;UBERON:0000160!2.04e-25!43;UBERON:0004119!4.06e-22!130;UBERON:0000925!4.06e-22!130;UBERON:0006595!4.06e-22!130;UBERON:0001007!6.71e-22!128;UBERON:0001555!6.71e-22!128;UBERON:0007026!6.71e-22!128;UBERON:0004921!3.02e-20!126;UBERON:0004185!3.02e-20!126;UBERON:0000344!9.45e-15!15;UBERON:0001242!8.69e-13!13;UBERON:0000060!8.69e-13!13;UBERON:0001262!8.69e-13!13;UBERON:0004786!8.69e-13!13;UBERON:0004923!1.36e-12!24;UBERON:0003350!2.38e-09!9;UBERON:0004808!2.38e-09!9;UBERON:0001277!2.38e-09!9;UBERON:0000485!1.42e-08!11;UBERON:0002108!5.13e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.22e-36,31;UBERON:0000344,2.07e-30,15;UBERON:0001242,5.23e-25,13;UBERON:0001262,5.23e-25,13;UBERON:0004786,5.23e-25,13;UBERON:0005409,4.53e-22,47;UBERON:0004923,6.27e-18,24;UBERON:0003350,1.48e-15,9;UBERON:0004808,1.48e-15,9;UBERON:0001277,1.48e-15,9;UBERON:0000485,1.56e-12,11;UBERON:0002108,1.33e-11,4;UBERON:0000331,8.11e-09,3;UBERON:0002116,8.11e-09,3;UBERON:0001204,8.11e-09,3;UBERON:0001168,8.11e-09,3;UBERON:0001007,4.59e-08,116;UBERON:0001555,4.59e-08,116;UBERON:0007026,4.59e-08,116;UBERON:0004119,7.64e-08,118;UBERON:0000925,7.64e-08,118;UBERON:0006595,7.64e-08,118;UBERON:0001962,4.81e-07,2;UBERON:0001961,4.81e-07,2;UBERON:0001744,4.81e-07,2
|phase1_expression=0,3.14077866875425,3.18499467572675,0.90739263392049,0.500895729946347,5.20425742926858,4.90586545250604,0,0,0.234064526321993,0.513653904676515,0.717949430958028,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0.522399578277871,6.39969691173627,5.04700418347774,2.8711598205751,4.73838195774982,5.17130958446134,1.71021077510736,3.52842181663903,3.99114919179548,0,1.23012957516914,0,9.82095507154334,12.4675984018869,11.637653306955,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.68510327831436,0.258937883647172,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0.209446706813455,3.83185582812887,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.3800550999719,0,0.464473343720877,0.77320476793256,1.21010114774006,0.889512175379481,1.33157938278791,5.69434873853414,1.4822905925161,0.754005626400808,0.795825888164603,0.974820435595601,3.59527763461689,3.45820879799511,4.77939055810481,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,2.65490276679926,0,0,0.943025398779491,0.885905678642318,1.53717573971964,2.32585463851399,0.363533729477506,0,2.52829406348653,0,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,0,0.441056796109924,0,0,0,0,0,7.57850175237612,0,0,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.648032044930808,0.627264888043406,0.436725127492355,0.269728692769641,0.495920734352016,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0,0,0,0.734015410979976,0.483168241652012,0,0,0.608175645870493,0,0.25984164595559,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0
|phase1_expression=0,3.14077866875425,3.18499467572675,0.90739263392049,0.500895729946347,5.20425742926858,4.90586545250604,0,0,0.234064526321993,0.513653904676515,0.717949430958028,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0.522399578277871,6.39969691173627,5.04700418347774,2.8711598205751,4.73838195774982,5.17130958446134,1.71021077510736,3.52842181663903,3.99114919179548,0,1.23012957516914,0,9.82095507154334,12.4675984018869,11.637653306955,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0.253359865475099,0,0.68510327831436,0.258937883647172,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0.209446706813455,3.83185582812887,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,2.3800550999719,0,0.464473343720877,0.77320476793256,1.21010114774006,0.889512175379481,1.33157938278791,5.69434873853414,1.4822905925161,0.754005626400808,0.795825888164603,0.974820435595601,3.59527763461689,3.45820879799511,4.77939055810481,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0.50925170356284,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,2.65490276679926,0,0,0.943025398779491,0.885905678642318,1.53717573971964,2.32585463851399,0.363533729477506,0,2.52829406348653,0,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,0,0.441056796109924,0,0,0,0,0,7.57850175237612,0,0,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,0.954670618015114,0,0.203319467126849,0.648032044930808,0.627264888043406,0.436725127492355,0.269728692769641,0.495920734352016,0.26175594198403,0.90730481304255,0,0,0,0,0,0,0,0,0,0.734015410979976,0.483168241652012,0,0,0.608175645870493,0,0.25984164595559,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0.192423683280659,0.350630706544707,0,0,0,0,0,0,0,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0
|short_description=p@chr10:126604039..126604059,-
}}
}}

Latest revision as of 00:50, 4 August 2015

Short description:p@chr10:126604039..126604059, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr10:126604039..126604059, -
Coexpression cluster:MCL_coexpression_mm9:474
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
2.5
5.0
7.5
10.0
12.5
15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data