FFCP PHASE1:Mm9::chr19:41337833..41337868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:41337833..41337868,+ | |||
|description=CAGE_peak_at_chr19:41337833..41337868,+ | |description=CAGE_peak_at_chr19:41337833..41337868,+ | ||
|id=chr19:41337833..41337868,+ | |id=chr19:41337833..41337868,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.06e-11,3;CL:0000239,8.00e-10,6;CL:0000677,8.00e-10,6;CL:0000584,8.00e-10,6;CL:0002563,1.61e-09,9;CL:0002251,1.61e-09,9;CL:0000075,2.01e-08,7;CL:0000473,2.20e-08,7;CL:0000066,6.18e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.32e-07!59;UBERON:0000344!3.45e-07!15 | |ontology_enrichment_uberon=UBERON:0005409!1.32e-07!59;UBERON:0000344!3.45e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.21e-21,15;UBERON:0001242,1.12e-15,13;UBERON:0001262,1.12e-15,13;UBERON:0004786,1.12e-15,13;UBERON:0004923,2.02e-12,24;UBERON:0000160,2.92e-11,31;UBERON:0000331,1.86e-10,3;UBERON:0002116,1.86e-10,3;UBERON:0001204,1.86e-10,3;UBERON:0001168,1.86e-10,3;UBERON:0003350,1.61e-09,9;UBERON:0004808,1.61e-09,9;UBERON:0001277,1.61e-09,9;UBERON:0002108,5.92e-08,4;UBERON:0001155,9.13e-08,2;UBERON:0000059,9.13e-08,2;UBERON:0000485,9.86e-08,11;UBERON:0001962,1.34e-07,2;UBERON:0001961,1.34e-07,2;UBERON:0001744,1.34e-07,2;UBERON:0005409,9.57e-07,47 | |||
|phase1_expression=0,4.53668029931169,4.54999239389536,0.60492842261366,0,3.69334398206158,3.50418960893289,0.387369970324729,0.563154888606667,0.468129052643987,0,0.159544317990673,0,0.699363219351979,0.333109761815663,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.255129870453209,0.496454756004426,0.522399578277871,2.23989391910769,1.37645568640302,5.16808767703518,3.87685796543167,5.38678081714723,1.33016393619462,1.00812051903972,7.76056787293567,0,0.61506478758457,0,0,0.498703936075477,1.02084678131185,4.18531630736908,0,1.57057123192139,2.35292595212406,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0.672187598284928,0.771778308107841,0,0,0.202316460859598,0,0,0.677689064138264,0,1.7997994345628,0,1.4209602298922,0.599200221036809,0.384218305321555,0,0,0,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0.852151612890289,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.45673551887624,0,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0,0,0.485300549842228,0,0,1.86391761218122,0,0,2.04365644166873,1.07833612055328,0.599902730993408,1.01656181658452,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.203678727700633,0.248813941220186,0,0,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,0.272145996605311,0,0.0937017245597288,0,0.215567992932842,0,0,0.43839146485515,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0,0.330418782983798,0.528901133327089,0.426576501070468,0,0,0.201683524623343,0.444756087689741,0.190225626112559,1.42358718463353,0.164698954724011,0.251335208800269,0.596869416123452,0.779856348476481,0,0.432276099749388,0.398282546508734,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,1.24815069245824,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0.690739927463582,0.144649058581512,1.50791283939272,0,0.491764273019036,0.827810238914197,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0.23467170806371,0.21183207086382,1.10264199027481,0,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,1.35982743995084,0.559805809294632,0.414599921413271,0.954670618015114,0.316335993581135,0,0.432021363287205,0.209088296014469,0.655087691238533,0.539457385539283,0.661227645802687,0.26175594198403,0.90730481304255,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.304827226619999,0.100826185136841,0.194915761479505,0.288635524920988,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.355905054372522,0,0,0,0.578719832943424,0,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,4.53668029931169,4.54999239389536,0.60492842261366,0,3.69334398206158,3.50418960893289,0.387369970324729,0.563154888606667,0.468129052643987,0,0.159544317990673,0,0.699363219351979,0.333109761815663,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.255129870453209,0.496454756004426,0.522399578277871,2.23989391910769,1.37645568640302,5.16808767703518,3.87685796543167,5.38678081714723,1.33016393619462,1.00812051903972,7.76056787293567,0,0.61506478758457,0,0,0.498703936075477,1.02084678131185,4.18531630736908,0,1.57057123192139,2.35292595212406,0.683045484958446,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0.672187598284928,0.771778308107841,0,0,0.202316460859598,0,0,0.677689064138264,0,1.7997994345628,0,1.4209602298922,0.599200221036809,0.384218305321555,0,0,0,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0.852151612890289,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.45673551887624,0,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0,0,0.485300549842228,0,0,1.86391761218122,0,0,2.04365644166873,1.07833612055328,0.599902730993408,1.01656181658452,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.203678727700633,0.248813941220186,0,0,0.130120442962704,0.229902104433473,0.360124259610698,0.452114453507145,0.272145996605311,0,0.0937017245597288,0,0.215567992932842,0,0,0.43839146485515,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,0,0,0.330418782983798,0.528901133327089,0.426576501070468,0,0,0.201683524623343,0.444756087689741,0.190225626112559,1.42358718463353,0.164698954724011,0.251335208800269,0.596869416123452,0.779856348476481,0,0.432276099749388,0.398282546508734,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,1.24815069245824,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0.159454768657487,0,0.690739927463582,0.144649058581512,1.50791283939272,0,0.491764273019036,0.827810238914197,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0.23467170806371,0.21183207086382,1.10264199027481,0,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0,0,1.35982743995084,0.559805809294632,0.414599921413271,0.954670618015114,0.316335993581135,0,0.432021363287205,0.209088296014469,0.655087691238533,0.539457385539283,0.661227645802687,0.26175594198403,0.90730481304255,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.304827226619999,0.100826185136841,0.194915761479505,0.288635524920988,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.355905054372522,0,0,0,0.578719832943424,0,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr19:41337833..41337868,+ | |short_description=p@chr19:41337833..41337868,+ | ||
}} | }} |
Latest revision as of 02:14, 4 August 2015
Short description: | p@chr19:41337833..41337868, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:41337833..41337868, + |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.06e-11 | 3 |
brush border epithelial cell | 8.00e-10 | 6 |
gut absorptive cell | 8.00e-10 | 6 |
enterocyte | 8.00e-10 | 6 |
intestinal epithelial cell | 1.61e-09 | 9 |
epithelial cell of alimentary canal | 1.61e-09 | 9 |
columnar/cuboidal epithelial cell | 2.01e-08 | 7 |
defensive cell | 2.20e-08 | 7 |
epithelial cell | 6.18e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.21e-21 | 15 |
intestinal mucosa | 1.12e-15 | 13 |
wall of intestine | 1.12e-15 | 13 |
gastrointestinal system mucosa | 1.12e-15 | 13 |
organ component layer | 2.02e-12 | 24 |
intestine | 2.92e-11 | 31 |
ileal mucosa | 1.86e-10 | 3 |
ileum | 1.86e-10 | 3 |
mucosa of small intestine | 1.86e-10 | 3 |
wall of small intestine | 1.86e-10 | 3 |
epithelium of mucosa | 1.61e-09 | 9 |
gastrointestinal system epithelium | 1.61e-09 | 9 |
intestinal epithelium | 1.61e-09 | 9 |
small intestine | 5.92e-08 | 4 |
colon | 9.13e-08 | 2 |
large intestine | 9.13e-08 | 2 |
simple columnar epithelium | 9.86e-08 | 11 |
gut-associated lymphoid tissue | 1.34e-07 | 2 |
mucosa-associated lymphoid tissue | 1.34e-07 | 2 |
lymphoid tissue | 1.34e-07 | 2 |
gastrointestinal system | 9.57e-07 | 47 |