FFCP PHASE1:Mm9::chr8:74243126..74243137,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=503|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:74243126..74243137,-|id=chr8:74243126..74243137,-|ontology_enrichment_celltype=CL:0000540!1.07e-25!33;CL:0000047!1.07e-25!33;CL:0000031!1.07e-25!33;CL:0000404!1.07e-25!33;CL:0000393!7.58e-21!39;CL:0000211!7.58e-21!39;CL:0000117!3.36e-20!23;CL:0000337!3.36e-20!23;CL:0002319!2.27e-18!43;CL:0000221!8.04e-18!44;CL:0000133!8.04e-18!44;CL:0000055!5.36e-15!50;CL:0002609!1.51e-11!6;CL:0002321!3.91e-09!70;CL:0000220!3.91e-09!70;CL:0002610!7.10e-08!3;CL:0002614!7.85e-08!3;CL:0000107!1.75e-07!9|ontology_enrichment_celltype_v019_2=CL:0002610,4.54e-30,3;CL:0002614,7.14e-30,3;CL:0000117,1.24e-20,23;CL:0000337,1.24e-20,23;CL:0000540,2.32e-14,33;CL:0000047,2.32e-14,33;CL:0000031,2.32e-14,33;CL:0000404,2.32e-14,33;CL:0000393,3.94e-12,39;CL:0000211,3.94e-12,39;CL:0002319,5.49e-11,43;CL:0000221,9.85e-11,44;CL:0000133,9.85e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.76e-13!73;UBERON:0005743!8.76e-13!73;UBERON:0000073!2.86e-12!75;UBERON:0001016!2.86e-12!75;UBERON:0002020!1.10e-08!34;UBERON:0002616!3.32e-08!49;UBERON:0004121!4.13e-08!102;UBERON:0000924!4.13e-08!102;UBERON:0006601!4.13e-08!102;UBERON:0000955!5.82e-08!50;UBERON:0006238!5.82e-08!50;UBERON:0004684!7.10e-08!3;UBERON:0002275!7.10e-08!3;UBERON:0002038!7.85e-08!3;UBERON:0002308!7.85e-08!3;UBERON:0009663!7.85e-08!3;UBERON:0009661!7.85e-08!3;UBERON:0006331!7.85e-08!3;UBERON:0000125!7.85e-08!3;UBERON:0002410!1.75e-07!9;UBERON:0000945!3.21e-07!16;UBERON:0010039!3.21e-07!16;UBERON:0001049!3.26e-07!52;UBERON:0005068!3.26e-07!52;UBERON:0006241!3.26e-07!52;UBERON:0007135!3.26e-07!52;UBERON:0002780!5.77e-07!39;UBERON:0001890!5.77e-07!39;UBERON:0006240!5.77e-07!39;UBERON:0000013!6.50e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.54e-30,3;UBERON:0002275,4.54e-30,3;UBERON:0002038,7.14e-30,3;UBERON:0009663,7.14e-30,3;UBERON:0009661,7.14e-30,3;UBERON:0000125,7.14e-30,3;UBERON:0002308,7.14e-30,3;UBERON:0002950,1.30e-22,4;UBERON:0001891,1.30e-22,4;UBERON:0009616,1.30e-22,4;UBERON:0010286,1.30e-22,4;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0000073,1.05e-08,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0.405017814995072,0.420649922702764,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,3.30347642998166,2.80912143787413,2.4577045320999,0,0.182975287204819,0,6.42120897703176,1.68828783009504,1.37518422999129,1.17851434189467,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.565105371014073,0.956859594047176,0.228778173206523,0,0,0,3.81868247206045,0,0,0,0,0,0.134864346384821,0.578574190077352,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr8:74243126..74243137,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=503 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:74243126..74243137,- | |||
|description=CAGE_peak_at_chr8:74243126..74243137,- | |||
|id=chr8:74243126..74243137,- | |||
|ontology_enrichment_celltype=CL:0000540!1.07e-25!33;CL:0000047!1.07e-25!33;CL:0000031!1.07e-25!33;CL:0000404!1.07e-25!33;CL:0000393!7.58e-21!39;CL:0000211!7.58e-21!39;CL:0000117!3.36e-20!23;CL:0000337!3.36e-20!23;CL:0002319!2.27e-18!43;CL:0000221!8.04e-18!44;CL:0000133!8.04e-18!44;CL:0000055!5.36e-15!50;CL:0002609!1.51e-11!6;CL:0002321!3.91e-09!70;CL:0000220!3.91e-09!70;CL:0002610!7.10e-08!3;CL:0002614!7.85e-08!3;CL:0000107!1.75e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.54e-30,3;CL:0002614,7.14e-30,3;CL:0000117,1.24e-20,23;CL:0000337,1.24e-20,23;CL:0000540,2.32e-14,33;CL:0000047,2.32e-14,33;CL:0000031,2.32e-14,33;CL:0000404,2.32e-14,33;CL:0000393,3.94e-12,39;CL:0000211,3.94e-12,39;CL:0002319,5.49e-11,43;CL:0000221,9.85e-11,44;CL:0000133,9.85e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.76e-13!73;UBERON:0005743!8.76e-13!73;UBERON:0000073!2.86e-12!75;UBERON:0001016!2.86e-12!75;UBERON:0002020!1.10e-08!34;UBERON:0002616!3.32e-08!49;UBERON:0004121!4.13e-08!102;UBERON:0000924!4.13e-08!102;UBERON:0006601!4.13e-08!102;UBERON:0000955!5.82e-08!50;UBERON:0006238!5.82e-08!50;UBERON:0004684!7.10e-08!3;UBERON:0002275!7.10e-08!3;UBERON:0002038!7.85e-08!3;UBERON:0002308!7.85e-08!3;UBERON:0009663!7.85e-08!3;UBERON:0009661!7.85e-08!3;UBERON:0006331!7.85e-08!3;UBERON:0000125!7.85e-08!3;UBERON:0002410!1.75e-07!9;UBERON:0000945!3.21e-07!16;UBERON:0010039!3.21e-07!16;UBERON:0001049!3.26e-07!52;UBERON:0005068!3.26e-07!52;UBERON:0006241!3.26e-07!52;UBERON:0007135!3.26e-07!52;UBERON:0002780!5.77e-07!39;UBERON:0001890!5.77e-07!39;UBERON:0006240!5.77e-07!39;UBERON:0000013!6.50e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.54e-30,3;UBERON:0002275,4.54e-30,3;UBERON:0002038,7.14e-30,3;UBERON:0009663,7.14e-30,3;UBERON:0009661,7.14e-30,3;UBERON:0000125,7.14e-30,3;UBERON:0002308,7.14e-30,3;UBERON:0002950,1.30e-22,4;UBERON:0001891,1.30e-22,4;UBERON:0009616,1.30e-22,4;UBERON:0010286,1.30e-22,4;UBERON:0002420,1.15e-11,8;UBERON:0007245,1.15e-11,8;UBERON:0010009,1.15e-11,8;UBERON:0010011,1.15e-11,8;UBERON:0000454,1.15e-11,8;UBERON:0000073,1.05e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518448061542388,0.405017814995072,0.420649922702764,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,3.30347642998166,2.80912143787413,2.4577045320999,0,0.182975287204819,0,6.42120897703176,1.68828783009504,1.37518422999129,1.17851434189467,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.565105371014073,0.956859594047176,0.228778173206523,0,0,0,3.81868247206045,0,0,0,0,0,0.134864346384821,0.578574190077352,0.785267825952089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr8:74243126..74243137,- | |||
}} |
Latest revision as of 02:16, 4 August 2015
Short description: | p@chr8:74243126..74243137, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:74243126..74243137, - |
Coexpression cluster: | MCL_coexpression_mm9:503 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.54e-30 | 3 |
neuron of the substantia nigra | 7.14e-30 | 3 |
CNS neuron (sensu Vertebrata) | 1.24e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-20 | 23 |
neuron | 2.32e-14 | 33 |
neuronal stem cell | 2.32e-14 | 33 |
neuroblast | 2.32e-14 | 33 |
electrically signaling cell | 2.32e-14 | 33 |
electrically responsive cell | 3.94e-12 | 39 |
electrically active cell | 3.94e-12 | 39 |
neural cell | 5.49e-11 | 43 |
ectodermal cell | 9.85e-11 | 44 |
neurectodermal cell | 9.85e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.54e-30 | 3 |
reticular formation | 4.54e-30 | 3 |
substantia nigra | 7.14e-30 | 3 |
telencephalic nucleus | 7.14e-30 | 3 |
midbrain nucleus | 7.14e-30 | 3 |
neural nucleus | 7.14e-30 | 3 |
nucleus of brain | 7.14e-30 | 3 |
regional part of midbrain | 1.30e-22 | 4 |
midbrain | 1.30e-22 | 4 |
presumptive midbrain | 1.30e-22 | 4 |
midbrain neural tube | 1.30e-22 | 4 |
basal ganglion | 1.15e-11 | 8 |
nuclear complex of neuraxis | 1.15e-11 | 8 |
aggregate regional part of brain | 1.15e-11 | 8 |
collection of basal ganglia | 1.15e-11 | 8 |
cerebral subcortex | 1.15e-11 | 8 |
regional part of nervous system | 1.05e-08 | 54 |