FFCP PHASE1:Mm9::chr16:94748437..94748446,-: Difference between revisions
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{{FFCP|EntrezGene=13185|HGNC=|MCL_coexpression_id=386|UniProt=O35075|association_with_transcript=0bp_to_ENSMUST00000023615_5end|description=CAGE_peak_4_at_Dscr3_5end|id=chr16:94748437..94748446,-|ontology_enrichment_celltype=CL:0000066!1.42e-08!25;CL:0000063!6.33e-08!66;CL:0002563!7.76e-08!9;CL:0002251!7.76e-08!9|ontology_enrichment_celltype_v019_2=CL:0000066,9.43e-19,25;CL:0002563,9.09e-17,9;CL:0002251,9.09e-17,9;CL:0000223,8.51e-13,20;CL:0000682,1.09e-12,3;CL:0000239,5.32e-12,6;CL:0000677,5.32e-12,6;CL:0000584,5.32e-12,6;CL:0000075,2.64e-10,7;CL:0002076,7.16e-10,15;CL:0000355,6.29e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.02e-14,3;DOID:4045,4.02e-14,3;DOID:0050686,2.75e-07,6|ontology_enrichment_uberon=UBERON:0000485!7.46e-09!11;UBERON:0003350!7.76e-08!9;UBERON:0004808!7.76e-08!9;UBERON:0001277!7.76e-08!9;UBERON:0001242!7.89e-07!13;UBERON:0000060!7.89e-07!13;UBERON:0001262!7.89e-07!13;UBERON:0004786!7.89e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.09e-17,9;UBERON:0004808,9.09e-17,9;UBERON:0001277,9.09e-17,9;UBERON:0000485,1.23e-13,11;UBERON:0001242,1.82e-11,13;UBERON:0001262,1.82e-11,13;UBERON:0004786,1.82e-11,13;UBERON:0000344,7.16e-10,15;UBERON:0001134,6.29e-08,9;UBERON:0002036,6.29e-08,9;UBERON:0002385,6.29e-08,9;UBERON:0000486,6.29e-08,9;UBERON:0007503,6.29e-08,9;UBERON:0001015,6.29e-08,9;UBERON:0002329,6.29e-08,9;UBERON:0003082,6.29e-08,9;UBERON:0003059,6.29e-08,9;UBERON:0007282,6.29e-08,9;UBERON:0004290,6.29e-08,9;UBERON:0009618,6.29e-08,9;UBERON:0000490,1.90e-07,66;UBERON:0000383,3.83e-07,10|phase1_expression=0.80074423552397,1.74487703819681,1.36499771816861,4.53696316960245,3.50627010962443,0.671517087647559,0.233612640595526,1.16210991097419,0.422366166455,0,0.171217968225505,0,0.856003649656029,0.437102012094987,0,0,0.699561878128147,0,0.137114433605739,0,0,0.397163804803541,0,0,0,1.14846392823004,1.29228598847722,1.07735616342945,0,0.504060259519861,0,0,0.61506478758457,0,1.1554064790051,0.498703936075477,1.22501613757421,5.02237956884289,3.1253413780952,2.09409497589519,8.82347232046521,1.36609096991689,3.39857247121808,0,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0.335565212115473,2.17608642603403,1.00828139742739,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0.898800331555214,0,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.302286240427142,2.02905142091174,0,2.719885334831,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0,0,0.461230994512117,0.301445281105245,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0,0,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0,0,0,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0.414599921413271,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0.350630706544707,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0.365855945745545,0.526139422875686,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p4@Dscr3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13185 | |||
|HGNC= | |||
|MCL_coexpression_id=386 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35075 | |||
|association_with_transcript=0bp_to_ENSMUST00000023615_5end | |||
|cluster_id=chr16:94748437..94748446,- | |||
|description=CAGE_peak_4_at_Dscr3_5end | |||
|id=chr16:94748437..94748446,- | |||
|ontology_enrichment_celltype=CL:0000066!1.42e-08!25;CL:0000063!6.33e-08!66;CL:0002563!7.76e-08!9;CL:0002251!7.76e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.43e-19,25;CL:0002563,9.09e-17,9;CL:0002251,9.09e-17,9;CL:0000223,8.51e-13,20;CL:0000682,1.09e-12,3;CL:0000239,5.32e-12,6;CL:0000677,5.32e-12,6;CL:0000584,5.32e-12,6;CL:0000075,2.64e-10,7;CL:0002076,7.16e-10,15;CL:0000355,6.29e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.02e-14,3;DOID:4045,4.02e-14,3;DOID:0050686,2.75e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000485!7.46e-09!11;UBERON:0003350!7.76e-08!9;UBERON:0004808!7.76e-08!9;UBERON:0001277!7.76e-08!9;UBERON:0001242!7.89e-07!13;UBERON:0000060!7.89e-07!13;UBERON:0001262!7.89e-07!13;UBERON:0004786!7.89e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.09e-17,9;UBERON:0004808,9.09e-17,9;UBERON:0001277,9.09e-17,9;UBERON:0000485,1.23e-13,11;UBERON:0001242,1.82e-11,13;UBERON:0001262,1.82e-11,13;UBERON:0004786,1.82e-11,13;UBERON:0000344,7.16e-10,15;UBERON:0001134,6.29e-08,9;UBERON:0002036,6.29e-08,9;UBERON:0002385,6.29e-08,9;UBERON:0000486,6.29e-08,9;UBERON:0007503,6.29e-08,9;UBERON:0001015,6.29e-08,9;UBERON:0002329,6.29e-08,9;UBERON:0003082,6.29e-08,9;UBERON:0003059,6.29e-08,9;UBERON:0007282,6.29e-08,9;UBERON:0004290,6.29e-08,9;UBERON:0009618,6.29e-08,9;UBERON:0000490,1.90e-07,66;UBERON:0000383,3.83e-07,10 | |||
|phase1_expression=0.80074423552397,1.74487703819681,1.36499771816861,4.53696316960245,3.50627010962443,0.671517087647559,0.233612640595526,1.16210991097419,0.422366166455,0,0.171217968225505,0,0.856003649656029,0.437102012094987,0,0,0.699561878128147,0,0.137114433605739,0,0,0.397163804803541,0,0,0,1.14846392823004,1.29228598847722,1.07735616342945,0,0.504060259519861,0,0,0.61506478758457,0,1.1554064790051,0.498703936075477,1.22501613757421,5.02237956884289,3.1253413780952,2.09409497589519,8.82347232046521,1.36609096991689,3.39857247121808,0,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0.335565212115473,2.17608642603403,1.00828139742739,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0.898800331555214,0,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.302286240427142,2.02905142091174,0,2.719885334831,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0,0,0.461230994512117,0.301445281105245,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0,0,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0.180062061461015,0,0,0,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0.234423373184406,0,0.252470927204373,0,0,0,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0.414599921413271,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0.350630706544707,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0.365855945745545,0.526139422875686,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Dscr3 | |||
}} |
Revision as of 05:58, 4 August 2015
Short description: | p4@Dscr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dscr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | 0bp_to_ENSMUST00000023615_5end |
EntrezGene: | 13185 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.43e-19 | 25 |
intestinal epithelial cell | 9.09e-17 | 9 |
epithelial cell of alimentary canal | 9.09e-17 | 9 |
endodermal cell | 8.51e-13 | 20 |
M cell of gut | 1.09e-12 | 3 |
brush border epithelial cell | 5.32e-12 | 6 |
gut absorptive cell | 5.32e-12 | 6 |
enterocyte | 5.32e-12 | 6 |
columnar/cuboidal epithelial cell | 2.64e-10 | 7 |
endo-epithelial cell | 7.16e-10 | 15 |
multi-potent skeletal muscle stem cell | 6.29e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 9.09e-17 | 9 |
gastrointestinal system epithelium | 9.09e-17 | 9 |
intestinal epithelium | 9.09e-17 | 9 |
simple columnar epithelium | 1.23e-13 | 11 |
intestinal mucosa | 1.82e-11 | 13 |
wall of intestine | 1.82e-11 | 13 |
gastrointestinal system mucosa | 1.82e-11 | 13 |
mucosa | 7.16e-10 | 15 |
skeletal muscle tissue | 6.29e-08 | 9 |
striated muscle tissue | 6.29e-08 | 9 |
muscle tissue | 6.29e-08 | 9 |
multilaminar epithelium | 6.29e-08 | 9 |
epithelial vesicle | 6.29e-08 | 9 |
musculature | 6.29e-08 | 9 |
somite | 6.29e-08 | 9 |
myotome | 6.29e-08 | 9 |
presomitic mesoderm | 6.29e-08 | 9 |
presumptive segmental plate | 6.29e-08 | 9 |
dermomyotome | 6.29e-08 | 9 |
trunk paraxial mesoderm | 6.29e-08 | 9 |
unilaminar epithelium | 1.90e-07 | 66 |
musculature of body | 3.83e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.02e-14 | 3 |
muscle cancer | 4.02e-14 | 3 |
organ system cancer | 2.75e-07 | 6 |