FFCP PHASE1:Mm9::chr7:142460262..142460264,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100043254|HGNC=|MCL_coexpression_id=503|UniProt=P0C0P8|association_with_transcript=-37bp_to_ENSMUST00000097983,NM_001163611,uc012fvj.1_5end|description=CAGE_peak_1_at_Nps_5end|id=chr7:142460262..142460264,+|ontology_enrichment_celltype=CL:0000117!3.02e-10!23;CL:0000337!3.02e-10!23;CL:0002610!1.14e-09!3;CL:0000540!4.76e-07!33;CL:0000047!4.76e-07!33;CL:0000031!4.76e-07!33;CL:0000404!4.76e-07!33|ontology_enrichment_celltype_v019_2=CL:0002614,5.61e-30,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!3.38e-19!6;UBERON:0001896!4.75e-15!2;UBERON:0005290!4.75e-15!2;UBERON:0010096!4.75e-15!2;UBERON:0002616!1.76e-10!49;UBERON:0000955!2.96e-10!50;UBERON:0006238!2.96e-10!50;UBERON:0001017!3.03e-10!73;UBERON:0005743!3.03e-10!73;UBERON:0000073!6.10e-10!75;UBERON:0001016!6.10e-10!75;UBERON:0001049!6.80e-10!52;UBERON:0005068!6.80e-10!52;UBERON:0006241!6.80e-10!52;UBERON:0007135!6.80e-10!52;UBERON:0004684!1.14e-09!3;UBERON:0002275!1.14e-09!3;UBERON:0003076!1.81e-09!12;UBERON:0003057!1.81e-09!12;UBERON:0002259!2.16e-08!1;UBERON:0002314!2.16e-08!1;UBERON:0006777!2.16e-08!1;UBERON:0005882!2.16e-08!1;UBERON:0002950!4.46e-08!4;UBERON:0001891!4.46e-08!4;UBERON:0009616!4.46e-08!4;UBERON:0000033!6.01e-08!63;UBERON:0002346!5.41e-07!71;UBERON:0003075!5.41e-07!71;UBERON:0007284!5.41e-07!71;UBERON:0004121!5.49e-07!102;UBERON:0000924!5.49e-07!102;UBERON:0006601!5.49e-07!102;UBERON:0007811!5.98e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002038,5.61e-30,3;UBERON:0009663,5.61e-30,3;UBERON:0009661,5.61e-30,3;UBERON:0000125,5.61e-30,3;UBERON:0002308,5.61e-30,3;UBERON:0002950,6.52e-23,4;UBERON:0001891,6.52e-23,4;UBERON:0009616,6.52e-23,4;UBERON:0010286,6.52e-23,4;UBERON:0002420,2.93e-12,8;UBERON:0007245,2.93e-12,8;UBERON:0010009,2.93e-12,8;UBERON:0010011,2.93e-12,8;UBERON:0000454,2.93e-12,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,5.02529398202486,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Nps}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100043254 | |||
|HGNC= | |||
|MCL_coexpression_id=503 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P0C0P8 | |||
|association_with_transcript=-37bp_to_ENSMUST00000097983,NM_001163611,uc012fvj.1_5end | |||
|cluster_id=chr7:142460262..142460264,+ | |||
|description=CAGE_peak_1_at_Nps_5end | |||
|id=chr7:142460262..142460264,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.02e-10!23;CL:0000337!3.02e-10!23;CL:0002610!1.14e-09!3;CL:0000540!4.76e-07!33;CL:0000047!4.76e-07!33;CL:0000031!4.76e-07!33;CL:0000404!4.76e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,5.61e-30,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!3.38e-19!6;UBERON:0001896!4.75e-15!2;UBERON:0005290!4.75e-15!2;UBERON:0010096!4.75e-15!2;UBERON:0002616!1.76e-10!49;UBERON:0000955!2.96e-10!50;UBERON:0006238!2.96e-10!50;UBERON:0001017!3.03e-10!73;UBERON:0005743!3.03e-10!73;UBERON:0000073!6.10e-10!75;UBERON:0001016!6.10e-10!75;UBERON:0001049!6.80e-10!52;UBERON:0005068!6.80e-10!52;UBERON:0006241!6.80e-10!52;UBERON:0007135!6.80e-10!52;UBERON:0004684!1.14e-09!3;UBERON:0002275!1.14e-09!3;UBERON:0003076!1.81e-09!12;UBERON:0003057!1.81e-09!12;UBERON:0002259!2.16e-08!1;UBERON:0002314!2.16e-08!1;UBERON:0006777!2.16e-08!1;UBERON:0005882!2.16e-08!1;UBERON:0002950!4.46e-08!4;UBERON:0001891!4.46e-08!4;UBERON:0009616!4.46e-08!4;UBERON:0000033!6.01e-08!63;UBERON:0002346!5.41e-07!71;UBERON:0003075!5.41e-07!71;UBERON:0007284!5.41e-07!71;UBERON:0004121!5.49e-07!102;UBERON:0000924!5.49e-07!102;UBERON:0006601!5.49e-07!102;UBERON:0007811!5.98e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,5.61e-30,3;UBERON:0009663,5.61e-30,3;UBERON:0009661,5.61e-30,3;UBERON:0000125,5.61e-30,3;UBERON:0002308,5.61e-30,3;UBERON:0002950,6.52e-23,4;UBERON:0001891,6.52e-23,4;UBERON:0009616,6.52e-23,4;UBERON:0010286,6.52e-23,4;UBERON:0002420,2.93e-12,8;UBERON:0007245,2.93e-12,8;UBERON:0010009,2.93e-12,8;UBERON:0010011,2.93e-12,8;UBERON:0000454,2.93e-12,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,5.02529398202486,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Nps | |||
}} |
Revision as of 10:11, 4 August 2015
Short description: | p1@Nps |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nps_5end |
Coexpression cluster: | MCL_coexpression_mm9:503 |
Association with transcript: | -37bp_to_ENSMUST00000097983, NM_001163611, uc012fvj.1_5end |
EntrezGene: | 100043254 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 5.61e-30 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 5.61e-30 | 3 |
telencephalic nucleus | 5.61e-30 | 3 |
midbrain nucleus | 5.61e-30 | 3 |
neural nucleus | 5.61e-30 | 3 |
nucleus of brain | 5.61e-30 | 3 |
regional part of midbrain | 6.52e-23 | 4 |
midbrain | 6.52e-23 | 4 |
presumptive midbrain | 6.52e-23 | 4 |
midbrain neural tube | 6.52e-23 | 4 |
basal ganglion | 2.93e-12 | 8 |
nuclear complex of neuraxis | 2.93e-12 | 8 |
aggregate regional part of brain | 2.93e-12 | 8 |
collection of basal ganglia | 2.93e-12 | 8 |
cerebral subcortex | 2.93e-12 | 8 |