FFCP PHASE1:Mm9::chr5:65814146..65814157,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22235|HGNC=|MCL_coexpression_id=11|UniProt=|association_with_transcript=-247bp_to_ENSMUST00000125375_5end|description=CAGE_peak_6_at_Ugdh_5end|id=chr5:65814146..65814157,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.37e-19!14;UBERON:0003918!1.37e-19!14;UBERON:0005095!1.37e-19!14;UBERON:0007687!1.37e-19!14;UBERON:0006554!5.21e-17!16;UBERON:0001008!6.04e-16!17;UBERON:0000489!1.06e-12!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.45e-32,14;UBERON:0003918,2.45e-32,14;UBERON:0011143,2.45e-32,14;UBERON:0005095,2.45e-32,14;UBERON:0007687,2.45e-32,14;UBERON:0006554,3.01e-25,18;UBERON:0001008,6.12e-24,19;UBERON:0000489,1.07e-21,21;UBERON:0003103,9.82e-11,43;UBERON:0005172,1.93e-09,49;UBERON:0005173,1.93e-09,49;UBERON:0002417,1.93e-09,49;UBERON:0000916,1.93e-09,49;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0009569,4.87e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,1.4255592949172,2.13347735884388,2.10407459670956,0.948548056863859,8.70899873079653,9.89091985400661,9.62497878590044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p6@Ugdh}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22235 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-247bp_to_ENSMUST00000125375_5end | |||
|cluster_id=chr5:65814146..65814157,- | |||
|description=CAGE_peak_6_at_Ugdh_5end | |||
|id=chr5:65814146..65814157,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.37e-19!14;UBERON:0003918!1.37e-19!14;UBERON:0005095!1.37e-19!14;UBERON:0007687!1.37e-19!14;UBERON:0006554!5.21e-17!16;UBERON:0001008!6.04e-16!17;UBERON:0000489!1.06e-12!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.45e-32,14;UBERON:0003918,2.45e-32,14;UBERON:0011143,2.45e-32,14;UBERON:0005095,2.45e-32,14;UBERON:0007687,2.45e-32,14;UBERON:0006554,3.01e-25,18;UBERON:0001008,6.12e-24,19;UBERON:0000489,1.07e-21,21;UBERON:0003103,9.82e-11,43;UBERON:0005172,1.93e-09,49;UBERON:0005173,1.93e-09,49;UBERON:0002417,1.93e-09,49;UBERON:0000916,1.93e-09,49;UBERON:0003104,1.31e-07,61;UBERON:0009142,1.31e-07,61;UBERON:0009569,4.87e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,1.4255592949172,2.13347735884388,2.10407459670956,0.948548056863859,8.70899873079653,9.89091985400661,9.62497878590044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p6@Ugdh | |||
}} |
Revision as of 12:45, 4 August 2015
Short description: | p6@Ugdh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ugdh_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -247bp_to_ENSMUST00000125375_5end |
EntrezGene: | 22235 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.45e-32 | 14 |
kidney mesenchyme | 2.45e-32 | 14 |
upper urinary tract | 2.45e-32 | 14 |
kidney rudiment | 2.45e-32 | 14 |
kidney field | 2.45e-32 | 14 |
urinary system structure | 3.01e-25 | 18 |
renal system | 6.12e-24 | 19 |
cavitated compound organ | 1.07e-21 | 21 |
compound organ | 9.82e-11 | 43 |
abdomen element | 1.93e-09 | 49 |
abdominal segment element | 1.93e-09 | 49 |
abdominal segment of trunk | 1.93e-09 | 49 |
abdomen | 1.93e-09 | 49 |
mesenchyme | 1.31e-07 | 61 |
entire embryonic mesenchyme | 1.31e-07 | 61 |
subdivision of trunk | 4.87e-07 | 66 |