FFCP PHASE1:Mm9::chr17:30552789..30552793,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:30552789..30552793,-
|short_description=p@chr17:30552789..30552793,-
|description=CAGE_peak_at_chr17:30552789..30552793,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:30552789..30552793,- | |||
|description=CAGE_peak_at_chr17:30552789..30552793,- | |||
|id=chr17:30552789..30552793,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.29e-12,6;CL:0000677,5.29e-12,6;CL:0000584,5.29e-12,6;CL:0000075,2.27e-10,7;CL:0002563,3.48e-08,9;CL:0002251,3.48e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.32e-20!43;UBERON:0005409!5.15e-19!59;UBERON:0004921!5.63e-08!126;UBERON:0004185!5.63e-08!126;UBERON:0001007!9.04e-08!128;UBERON:0001555!9.04e-08!128;UBERON:0007026!9.04e-08!128;UBERON:0004119!1.43e-07!130;UBERON:0000925!1.43e-07!130;UBERON:0006595!1.43e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.05e-28,31;UBERON:0005409,4.04e-18,47;UBERON:0001242,1.08e-09,13;UBERON:0001262,1.08e-09,13;UBERON:0004786,1.08e-09,13;UBERON:0000344,1.98e-08,15;UBERON:0003350,3.48e-08,9;UBERON:0004808,3.48e-08,9;UBERON:0001277,3.48e-08,9;UBERON:0004921,6.92e-07,114;UBERON:0000485,8.70e-07,11;UBERON:0001007,9.52e-07,116;UBERON:0001555,9.52e-07,116;UBERON:0007026,9.52e-07,116 | |||
|phase1_expression=0,2.09385244583617,0,2.41971369045464,4.00716583957078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14846392823004,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,1.85115396664481,0,0,0,1.21010114774006,0.667134131534611,0.760902504450237,1.42358718463353,0.988193728344065,1.00534083520108,0.397912944082302,0.58489226135736,0.898819408654221,1.72910439899755,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,2.09385244583617,0,2.41971369045464,4.00716583957078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14846392823004,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25172592354634,1.85115396664481,0,0,0,1.21010114774006,0.667134131534611,0.760902504450237,1.42358718463353,0.988193728344065,1.00534083520108,0.397912944082302,0.58489226135736,0.898819408654221,1.72910439899755,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:30552789..30552793,- | |||
}} | }} |
Latest revision as of 14:19, 4 August 2015
Short description: | p@chr17:30552789..30552793, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:30552789..30552793, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.29e-12 | 6 |
gut absorptive cell | 5.29e-12 | 6 |
enterocyte | 5.29e-12 | 6 |
columnar/cuboidal epithelial cell | 2.27e-10 | 7 |
intestinal epithelial cell | 3.48e-08 | 9 |
epithelial cell of alimentary canal | 3.48e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.05e-28 | 31 |
gastrointestinal system | 4.04e-18 | 47 |
intestinal mucosa | 1.08e-09 | 13 |
wall of intestine | 1.08e-09 | 13 |
gastrointestinal system mucosa | 1.08e-09 | 13 |
mucosa | 1.98e-08 | 15 |
epithelium of mucosa | 3.48e-08 | 9 |
gastrointestinal system epithelium | 3.48e-08 | 9 |
intestinal epithelium | 3.48e-08 | 9 |
subdivision of digestive tract | 6.92e-07 | 114 |
simple columnar epithelium | 8.70e-07 | 11 |
digestive system | 9.52e-07 | 116 |
digestive tract | 9.52e-07 | 116 |
primitive gut | 9.52e-07 | 116 |