FFCP PHASE1:Mm9::chr12:109723509..109723539,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2763 | |MCL_coexpression_id=2763 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109723509..109723539,+ | |||
|description=CAGE_peak_at_chr12:109723509..109723539,+ | |description=CAGE_peak_at_chr12:109723509..109723539,+ | ||
|id=chr12:109723509..109723539,+ | |id=chr12:109723509..109723539,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.77e-08!14;UBERON:0000117!1.77e-08!14;UBERON:0000171!1.77e-08!14;UBERON:0000170!1.77e-08!14;UBERON:0005597!1.77e-08!14;UBERON:0000118!1.77e-08!14;UBERON:0000468!4.02e-07!333 | |ontology_enrichment_uberon=UBERON:0002048!1.77e-08!14;UBERON:0000117!1.77e-08!14;UBERON:0000171!1.77e-08!14;UBERON:0000170!1.77e-08!14;UBERON:0005597!1.77e-08!14;UBERON:0000118!1.77e-08!14;UBERON:0000468!4.02e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.66e-14,14;UBERON:0000117,1.66e-14,14;UBERON:0000171,1.66e-14,14;UBERON:0000170,1.66e-14,14;UBERON:0005597,1.66e-14,14;UBERON:0000118,1.66e-14,14;UBERON:0005153,2.07e-11,17;UBERON:0005178,2.07e-11,17;UBERON:0005181,2.07e-11,17;UBERON:0002224,2.07e-11,17;UBERON:0000915,2.07e-11,17;UBERON:0008947,2.07e-11,17;UBERON:0003258,2.07e-11,17;UBERON:0005157,2.96e-09,20;UBERON:0000970,9.32e-07,9;UBERON:0000019,9.32e-07,9;UBERON:0000047,9.32e-07,9;UBERON:0010312,9.32e-07,9;UBERON:0004088,9.32e-07,9;UBERON:0002104,9.32e-07,9;UBERON:0001456,9.32e-07,9;UBERON:0003072,9.32e-07,9;UBERON:0004128,9.32e-07,9;UBERON:0003071,9.32e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0.745597783301202,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.693941307064543,0.608930956624282,0.230615497256059,0.753613202763113,1.64624189989987,0.251333182659351,0.494389935468748,0.578397427679647,0,2.42650274921114,0.441683036920787,0.484875253135222,0,1.46390398505774,1.67557365450764,0.255457055208591,0,0,0,0.898743836428936,0.457500602818626,0.502617408451458,1.04294592115366,1.27857728665165,1.0389402227978,1.1356888414743,2.54598409625791,0.248813941220186,0.505445516867349,1.26265113531884,0.650602214813519,0,0.900310649026746,2.26057226753573,3.06164246180975,2.8185018462667,1.87403449119458,4.65666067330228,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0,0.710234206755631,0.393528463494808,1.54267112887378,1.16266972375204,2.14618721119695,1.40118410840603,2.30383789878873,1.14917224855367,1.13496333364198,0.146199987425332,0.658650345873152,0.402619256281115,0.420579897128254,0.720332286654991,0.330418782983798,0,0.639864751605702,0.464473343720877,0.77320476793256,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0,1.75934646160189,0,0.974820435595601,0,0.432276099749388,0.199141273254367,0,0.456994050438915,1.1270773567308,1.22190796707189,1.35766741017338,1.75339549725796,0.948548056863859,0.442830443938806,0.784993639206874,0.123397163921801,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0,0.179397413521912,0,1.10851914099963,0.37898282354097,0.977789858652155,1.52770577197669,1.64283173801951,1.17254380209271,1.42826184531608,1.56106918286239,2.83743259391144,2.87904096543407,2.71073106717728,1.3109065177259,2.24490476425664,2.16973587872267,0,0,0,0,2.0871576698413,0.820481806145422,0.163934945376675,0,0.631016438832513,0,0,0,0.222798674082394,0.849229592366497,0,0.584511715822624,0,0.642642632843614,0.141940085208269,0.178065603667255,0.81443479676788,2.96946221350564,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,1.03135543248187,0.340439605753788,0.36012218806262,0,0,0.354680467284547,0.713475270408282,0.164549020602121,0.608929898229199,0.23467170806371,0,0.661585194164886,0.32977250588296,0.645857706783622,0.180938774784468,0,0.164140899745061,0,1.66882771809459,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0,0,0.954670618015114,0,0.609958401380546,0.86404272657441,1.25452977608681,1.31017538247707,2.56242258131159,1.73572257023205,0.523511883968059,1.42576470620972,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,1.520605129417,2.11243029562357,1.8228613878153,0.524296722128554,0.241584120826006,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0.233753804363138,0.680191150845634,0,0,0.167884616364078,0.772758376128762,0.750729901804728,1.09890974560359,0.428736758158132,3.51100472824754,2.25900737046827,0.920650473014354,0.572895513439397,0.171853182343688,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.341467211508268,0.486213434136588,0,0,0.666740183404846,0.618105171716683,0,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.256100609619477,0.574354689556133,0,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,1.37147700954166,0.177475806159338,0.715308569841963,0.436039249896986,0.564656282491984,0.507687647350059,1.64635175585495,0.263069711437843,0.814824683075171,1.68342681497322,0.355905054372522,0.591026894253381,0.409231043169689,0.77468420592983,0.385813221962283,0.249810577937946,0.467863216890817,0.644613162144895,0.956441660344217,0.220591419119515,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0.745597783301202,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.693941307064543,0.608930956624282,0.230615497256059,0.753613202763113,1.64624189989987,0.251333182659351,0.494389935468748,0.578397427679647,0,2.42650274921114,0.441683036920787,0.484875253135222,0,1.46390398505774,1.67557365450764,0.255457055208591,0,0,0,0.898743836428936,0.457500602818626,0.502617408451458,1.04294592115366,1.27857728665165,1.0389402227978,1.1356888414743,2.54598409625791,0.248813941220186,0.505445516867349,1.26265113531884,0.650602214813519,0,0.900310649026746,2.26057226753573,3.06164246180975,2.8185018462667,1.87403449119458,4.65666067330228,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0,0.710234206755631,0.393528463494808,1.54267112887378,1.16266972375204,2.14618721119695,1.40118410840603,2.30383789878873,1.14917224855367,1.13496333364198,0.146199987425332,0.658650345873152,0.402619256281115,0.420579897128254,0.720332286654991,0.330418782983798,0,0.639864751605702,0.464473343720877,0.77320476793256,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0,1.75934646160189,0,0.974820435595601,0,0.432276099749388,0.199141273254367,0,0.456994050438915,1.1270773567308,1.22190796707189,1.35766741017338,1.75339549725796,0.948548056863859,0.442830443938806,0.784993639206874,0.123397163921801,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0,0.179397413521912,0,1.10851914099963,0.37898282354097,0.977789858652155,1.52770577197669,1.64283173801951,1.17254380209271,1.42826184531608,1.56106918286239,2.83743259391144,2.87904096543407,2.71073106717728,1.3109065177259,2.24490476425664,2.16973587872267,0,0,0,0,2.0871576698413,0.820481806145422,0.163934945376675,0,0.631016438832513,0,0,0,0.222798674082394,0.849229592366497,0,0.584511715822624,0,0.642642632843614,0.141940085208269,0.178065603667255,0.81443479676788,2.96946221350564,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,1.03135543248187,0.340439605753788,0.36012218806262,0,0,0.354680467284547,0.713475270408282,0.164549020602121,0.608929898229199,0.23467170806371,0,0.661585194164886,0.32977250588296,0.645857706783622,0.180938774784468,0,0.164140899745061,0,1.66882771809459,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0,0,0.954670618015114,0,0.609958401380546,0.86404272657441,1.25452977608681,1.31017538247707,2.56242258131159,1.73572257023205,0.523511883968059,1.42576470620972,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,1.520605129417,2.11243029562357,1.8228613878153,0.524296722128554,0.241584120826006,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0.233753804363138,0.680191150845634,0,0,0.167884616364078,0.772758376128762,0.750729901804728,1.09890974560359,0.428736758158132,3.51100472824754,2.25900737046827,0.920650473014354,0.572895513439397,0.171853182343688,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.341467211508268,0.486213434136588,0,0,0.666740183404846,0.618105171716683,0,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.256100609619477,0.574354689556133,0,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,1.37147700954166,0.177475806159338,0.715308569841963,0.436039249896986,0.564656282491984,0.507687647350059,1.64635175585495,0.263069711437843,0.814824683075171,1.68342681497322,0.355905054372522,0.591026894253381,0.409231043169689,0.77468420592983,0.385813221962283,0.249810577937946,0.467863216890817,0.644613162144895,0.956441660344217,0.220591419119515,0.695603506861264 | ||
|short_description=p@chr12:109723509..109723539,+ | |short_description=p@chr12:109723509..109723539,+ | ||
}} | }} |
Latest revision as of 16:25, 4 August 2015
Short description: | p@chr12:109723509..109723539, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109723509..109723539, + |
Coexpression cluster: | MCL_coexpression_mm9:2763 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.66e-14 | 14 |
respiratory tube | 1.66e-14 | 14 |
respiration organ | 1.66e-14 | 14 |
pair of lungs | 1.66e-14 | 14 |
lung primordium | 1.66e-14 | 14 |
lung bud | 1.66e-14 | 14 |
epithelial bud | 2.07e-11 | 17 |
thoracic cavity element | 2.07e-11 | 17 |
thoracic segment organ | 2.07e-11 | 17 |
thoracic cavity | 2.07e-11 | 17 |
thoracic segment of trunk | 2.07e-11 | 17 |
respiratory primordium | 2.07e-11 | 17 |
endoderm of foregut | 2.07e-11 | 17 |
epithelial fold | 2.96e-09 | 20 |
eye | 9.32e-07 | 9 |
camera-type eye | 9.32e-07 | 9 |
simple eye | 9.32e-07 | 9 |
immature eye | 9.32e-07 | 9 |
ocular region | 9.32e-07 | 9 |
visual system | 9.32e-07 | 9 |
face | 9.32e-07 | 9 |
optic cup | 9.32e-07 | 9 |
optic vesicle | 9.32e-07 | 9 |
eye primordium | 9.32e-07 | 9 |