FFCP PHASE1:Mm9::chr17:34259204..34259227,-: Difference between revisions
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{{FFCP|EntrezGene=14312|HGNC=|UniProt=|association_with_transcript=13bp_to_uc008cbj.1_5end|description=CAGE_peak_7_at_Brd2_5end|id=chr17:34259204..34259227,-|ontology_enrichment_celltype=CL:0000540!2.27e-11!33;CL:0000047!2.27e-11!33;CL:0000031!2.27e-11!33;CL:0000404!2.27e-11!33;CL:0000393!2.44e-09!39;CL:0000211!2.44e-09!39;CL:0002319!4.25e-09!43;CL:0000117!1.50e-08!23;CL:0000337!1.50e-08!23;CL:0000221!2.03e-08!44;CL:0000133!2.03e-08!44;CL:0000055!9.03e-08!50;CL:0002321!7.61e-07!70;CL:0000220!7.61e-07!70|ontology_enrichment_celltype_v019_2=CL:0000540,2.46e-14,33;CL:0000047,2.46e-14,33;CL:0000031,2.46e-14,33;CL:0000404,2.46e-14,33;CL:0000393,1.12e-11,39;CL:0000211,1.12e-11,39;CL:0002319,3.18e-11,43;CL:0000221,9.48e-11,44;CL:0000133,9.48e-11,44;CL:0002321,5.97e-10,70;CL:0000117,6.31e-10,23;CL:0000337,6.31e-10,23;CL:0002609,1.43e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.05e-09!73;UBERON:0005743!3.05e-09!73;UBERON:0000073!2.19e-08!75;UBERON:0001016!2.19e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.38e-10,73;UBERON:0001016,1.36e-09,75;UBERON:0002020,5.05e-07,34|phase1_expression=0.640595388419176,1.39590163055744,1.36499771816861,1.51232105653415,0.500895729946347,1.00727563147134,0.934450562382103,0.645616617207881,0.422366166455,0,0.856089841127525,0.8774937489487,2.22560948910567,0.34968160967599,0.666219523631325,0,0.699561878128147,1.10411757875383,0.274228867211478,0.42438965179803,0.935476191661768,0.297872853602656,0.261199789138935,0.799962113967033,1.37645568640302,1.72269589234506,0.86152399231815,1.939241094173,0.760093677825496,1.00812051903972,0.665191531965914,1.27006134691926,2.46025915033828,0,0.577703239502549,0.498703936075477,0.408338712524738,1.67412652294763,1.5626706890476,1.0470474879476,0,0,0.971020706062307,0.251793635951155,0.506884656097573,1.28482726513177,0.782391344348039,2.39827672018491,0.219686182734472,0.58328969722285,0.979904951377538,0,0.503347818173209,0,0.336093799142464,0.771778308107841,0.85960031981627,0,1.82084814773638,2.64495489636016,1.90149421051854,1.35537812827653,0.889294796111139,0.449949858640699,0.988866362566974,0,0.898800331555214,3.07374644257244,2.28117147078651,3.10513658162888,3.15487442027073,1.71390590642282,1.10434270475807,3.55223317723367,3.35459148563827,4.5960939330501,1.10115880999389,0.638436690425939,0.921639199537461,3.82470234417562,3.01909223887952,4.68822033501084,0.837548997004143,0,0.916789486660861,0.883885756421003,1.70846016958924,2.05039390407831,0.227178579999552,0.302286240427142,1.15945795480671,0.860423876981386,1.3599426674155,0,1.29955283489534,1.34408066129201,0.421333260395256,0,0,0.70667914902068,0.14084341977668,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.5709193985953,0.517875767294343,0.890652834388949,0.693941307064543,0,0,0.150722640552623,0.352766121407114,0.628332956648377,0.988779870937496,0.289198713839823,1.76922110389975,1.45590164952668,1.10420759230197,1.45462575940567,0,0.878342391034642,0.83778682725382,1.53274233125155,0.359445373517761,0,0.127070227073065,0.599162557619291,0,3.14135880282161,0.347648640384553,0.255715457330331,0.83115217823824,0.811206315338788,0.611036183101898,0.622034853050465,0.252722758433675,0.420883711772948,0.520481771850815,0.919608417733892,0.540186389416048,0.90422890701429,0.95251098811859,0.384341160854549,0.562210347358373,0.517406741478031,1.29340795759705,1.51284864134255,1.05570674498369,1.31517439456545,0.556094498451196,0.696504333044333,0.411564272815887,1.39323986772945,0,0,0.284163499395593,1.03562886267751,0.469052119962192,0.720248245844059,0.946978942340841,0.787056926989615,0.154267112887378,0.930135779001631,0.536546802799238,0.700592054203017,0.987359099480883,0.985004784474571,0.56748166682099,0.292399974850665,0.439100230582101,0.402619256281115,1.26173969138476,1.85228302282712,0.660837565967596,1.05780226665418,0.853153002140936,1.85789337488351,0.644337306610467,0.80673409849337,2.00140239460383,0.570676878337677,1.42358718463353,0.329397909448022,0.502670417600539,0.994782360205754,0.38992817423824,0,0,0.995706366271836,1.13800740571849,0.342745537829186,1.1270773567308,0.203651327845314,0.581857461502877,0.420814919341911,0.758838445491087,0.885660887877613,0.31399745568275,0.370191491765402,0.889357881261447,0.667380422864376,1.17935397067922,0.224862112384854,0.405720242777006,0,0.763877555344259,1.15078454980324,0.324270453550071,0.823684239564244,0,1.48856379067401,0.312037673114561,0.252578877947112,0.358794827043824,0,0.369506380333209,0.189491411770485,0.977789858652155,0.509235257325564,0.234690248288502,1.84256883185997,0.714130922658041,1.75620283072019,0.472905432318573,0,0.159454768657487,0.327726629431476,1.20879487306127,0.723245292907558,1.50791283939272,1.63171705145613,0,0.275936746304732,0.321101179975584,0.820481806145422,0.327869890753351,0,2.52406575533005,1.17131623288992,2.15423397732799,2.38968797952552,1.5595907185767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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14312 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=13bp_to_uc008cbj.1_5end | |||
|cluster_id=chr17:34259204..34259227,- | |||
|description=CAGE_peak_7_at_Brd2_5end | |||
|id=chr17:34259204..34259227,- | |||
|ontology_enrichment_celltype=CL:0000540!2.27e-11!33;CL:0000047!2.27e-11!33;CL:0000031!2.27e-11!33;CL:0000404!2.27e-11!33;CL:0000393!2.44e-09!39;CL:0000211!2.44e-09!39;CL:0002319!4.25e-09!43;CL:0000117!1.50e-08!23;CL:0000337!1.50e-08!23;CL:0000221!2.03e-08!44;CL:0000133!2.03e-08!44;CL:0000055!9.03e-08!50;CL:0002321!7.61e-07!70;CL:0000220!7.61e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.46e-14,33;CL:0000047,2.46e-14,33;CL:0000031,2.46e-14,33;CL:0000404,2.46e-14,33;CL:0000393,1.12e-11,39;CL:0000211,1.12e-11,39;CL:0002319,3.18e-11,43;CL:0000221,9.48e-11,44;CL:0000133,9.48e-11,44;CL:0002321,5.97e-10,70;CL:0000117,6.31e-10,23;CL:0000337,6.31e-10,23;CL:0002609,1.43e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.05e-09!73;UBERON:0005743!3.05e-09!73;UBERON:0000073!2.19e-08!75;UBERON:0001016!2.19e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.38e-10,73;UBERON:0001016,1.36e-09,75;UBERON:0002020,5.05e-07,34 | |||
|phase1_expression=0.640595388419176,1.39590163055744,1.36499771816861,1.51232105653415,0.500895729946347,1.00727563147134,0.934450562382103,0.645616617207881,0.422366166455,0,0.856089841127525,0.8774937489487,2.22560948910567,0.34968160967599,0.666219523631325,0,0.699561878128147,1.10411757875383,0.274228867211478,0.42438965179803,0.935476191661768,0.297872853602656,0.261199789138935,0.799962113967033,1.37645568640302,1.72269589234506,0.86152399231815,1.939241094173,0.760093677825496,1.00812051903972,0.665191531965914,1.27006134691926,2.46025915033828,0,0.577703239502549,0.498703936075477,0.408338712524738,1.67412652294763,1.5626706890476,1.0470474879476,0,0,0.971020706062307,0.251793635951155,0.506884656097573,1.28482726513177,0.782391344348039,2.39827672018491,0.219686182734472,0.58328969722285,0.979904951377538,0,0.503347818173209,0,0.336093799142464,0.771778308107841,0.85960031981627,0,1.82084814773638,2.64495489636016,1.90149421051854,1.35537812827653,0.889294796111139,0.449949858640699,0.988866362566974,0,0.898800331555214,3.07374644257244,2.28117147078651,3.10513658162888,3.15487442027073,1.71390590642282,1.10434270475807,3.55223317723367,3.35459148563827,4.5960939330501,1.10115880999389,0.638436690425939,0.921639199537461,3.82470234417562,3.01909223887952,4.68822033501084,0.837548997004143,0,0.916789486660861,0.883885756421003,1.70846016958924,2.05039390407831,0.227178579999552,0.302286240427142,1.15945795480671,0.860423876981386,1.3599426674155,0,1.29955283489534,1.34408066129201,0.421333260395256,0,0,0.70667914902068,0.14084341977668,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.5709193985953,0.517875767294343,0.890652834388949,0.693941307064543,0,0,0.150722640552623,0.352766121407114,0.628332956648377,0.988779870937496,0.289198713839823,1.76922110389975,1.45590164952668,1.10420759230197,1.45462575940567,0,0.878342391034642,0.83778682725382,1.53274233125155,0.359445373517761,0,0.127070227073065,0.599162557619291,0,3.14135880282161,0.347648640384553,0.255715457330331,0.83115217823824,0.811206315338788,0.611036183101898,0.622034853050465,0.252722758433675,0.420883711772948,0.520481771850815,0.919608417733892,0.540186389416048,0.90422890701429,0.95251098811859,0.384341160854549,0.562210347358373,0.517406741478031,1.29340795759705,1.51284864134255,1.05570674498369,1.31517439456545,0.556094498451196,0.696504333044333,0.411564272815887,1.39323986772945,0,0,0.284163499395593,1.03562886267751,0.469052119962192,0.720248245844059,0.946978942340841,0.787056926989615,0.154267112887378,0.930135779001631,0.536546802799238,0.700592054203017,0.987359099480883,0.985004784474571,0.56748166682099,0.292399974850665,0.439100230582101,0.402619256281115,1.26173969138476,1.85228302282712,0.660837565967596,1.05780226665418,0.853153002140936,1.85789337488351,0.644337306610467,0.80673409849337,2.00140239460383,0.570676878337677,1.42358718463353,0.329397909448022,0.502670417600539,0.994782360205754,0.38992817423824,0,0,0.995706366271836,1.13800740571849,0.342745537829186,1.1270773567308,0.203651327845314,0.581857461502877,0.420814919341911,0.758838445491087,0.885660887877613,0.31399745568275,0.370191491765402,0.889357881261447,0.667380422864376,1.17935397067922,0.224862112384854,0.405720242777006,0,0.763877555344259,1.15078454980324,0.324270453550071,0.823684239564244,0,1.48856379067401,0.312037673114561,0.252578877947112,0.358794827043824,0,0.369506380333209,0.189491411770485,0.977789858652155,0.509235257325564,0.234690248288502,1.84256883185997,0.714130922658041,1.75620283072019,0.472905432318573,0,0.159454768657487,0.327726629431476,1.20879487306127,0.723245292907558,1.50791283939272,1.63171705145613,0,0.275936746304732,0.321101179975584,0.820481806145422,0.327869890753351,0,2.52406575533005,1.17131623288992,2.15423397732799,2.38968797952552,1.55959071857676,3.11384183867716,1.61924280669958,0.292255857911312,1.97643888973262,1.60660658210904,1.13552068166615,1.24645922567079,0.488660878060728,0.494910368917606,2.65490276679926,0.485561272309963,0.906970670894253,0.565815239267694,1.18120757152309,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.36175842301515,0.900305470156551,0.776152102696527,0.643011105094777,1.24138163549592,1.78368817602071,1.31639216481697,0.913394847343798,0.938686832254841,1.48282449604674,0,0.65954501176592,0.645857706783622,1.20625849856312,0.596861720015682,0.492422699235184,0.582961673259701,0.18542530201051,0.341741761595705,0.619160603889667,0.185194527369712,0,0.546776910884101,0.457556346413045,0.169978429993855,0,0.138199973804424,0.954670618015114,0.632671987162271,0.609958401380546,0.756037385752609,0.209088296014469,0.218362563746178,0.404593039154462,0.826534557253359,0.26175594198403,0.777689839750757,0.621339313086926,0,1.19613236835183,1.15820943319968,0.777804753376191,0.904118764344118,1.01373675294467,1.17357238645754,1.3020438484395,0.943734099831398,0.241584120826006,0,0.316011120628178,1.0136260764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| |||
|short_description=p7@Brd2 | |||
}} |
Revision as of 16:40, 4 August 2015
Short description: | p7@Brd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Brd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_uc008cbj.1_5end |
EntrezGene: | 14312 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.46e-14 | 33 |
neuronal stem cell | 2.46e-14 | 33 |
neuroblast | 2.46e-14 | 33 |
electrically signaling cell | 2.46e-14 | 33 |
electrically responsive cell | 1.12e-11 | 39 |
electrically active cell | 1.12e-11 | 39 |
neural cell | 3.18e-11 | 43 |
ectodermal cell | 9.48e-11 | 44 |
neurectodermal cell | 9.48e-11 | 44 |
embryonic cell | 5.97e-10 | 70 |
CNS neuron (sensu Vertebrata) | 6.31e-10 | 23 |
neuroblast (sensu Vertebrata) | 6.31e-10 | 23 |
neuron of cerebral cortex | 1.43e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.38e-10 | 73 |
nervous system | 1.36e-09 | 75 |
gray matter | 5.05e-07 | 34 |