FFCP PHASE1:Mm9::chr9:123587991..123587996,-: Difference between revisions
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{{FFCP|EntrezGene=102680|HGNC=|MCL_coexpression_id=562|UniProt=Q8VDB9|association_with_transcript=6bp_to_ENSMUST00000040960_5end|description=CAGE_peak_3_at_Slc6a20a_5end|id=chr9:123587991..123587996,-|ontology_enrichment_celltype=CL:0000239!2.13e-07!6;CL:0000677!2.13e-07!6;CL:0000212!2.13e-07!6;CL:0000584!2.13e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,2.22e-23,6;CL:0000677,2.22e-23,6;CL:0000584,2.22e-23,6;CL:0000075,5.75e-20,7;CL:0002563,2.07e-15,9;CL:0002251,2.07e-15,9;CL:0002076,5.16e-09,15;CL:0000066,6.23e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.73e-12!59;UBERON:0004923!7.37e-11!24;UBERON:0000344!2.89e-10!15;UBERON:0000160!5.31e-10!43;UBERON:0001242!1.54e-08!13;UBERON:0000060!1.54e-08!13;UBERON:0001262!1.54e-08!13;UBERON:0004786!1.54e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.35e-29,15;UBERON:0004923,7.07e-29,24;UBERON:0001242,5.76e-23,13;UBERON:0001262,5.76e-23,13;UBERON:0004786,5.76e-23,13;UBERON:0000160,2.60e-21,31;UBERON:0005409,3.36e-20,47;UBERON:0003350,2.07e-15,9;UBERON:0004808,2.07e-15,9;UBERON:0001277,2.07e-15,9;UBERON:0000485,1.66e-12,11;UBERON:0001007,2.00e-09,116;UBERON:0001555,2.00e-09,116;UBERON:0007026,2.00e-09,116;UBERON:0004119,3.33e-09,118;UBERON:0000925,3.33e-09,118;UBERON:0006595,3.33e-09,118;UBERON:0001962,3.24e-08,2;UBERON:0001961,3.24e-08,2;UBERON:0001744,3.24e-08,2;UBERON:0004921,2.06e-07,114|phase1_expression=0,1.74487703819681,3.63999391511629,2.11724947914781,2.50447864973174,2.35030980676646,2.10251376535973,0,0,0,0,0,0,0,0.999329285446988,1.61980213911861,3.49780939064073,0,0,0,0.17008658030214,0,0,2.07990149631429,1.14704640533585,2.29692785646008,0.86152399231815,0.861884930743556,1.52018735565099,0.504060259519861,1.33038306393183,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,1.32504911076236,0.484875253135222,0,0,0.41889341362691,1.02182822083437,0,0,0,0.299581278809645,0,0,0.869121600961382,0,0.83115217823824,0.811206315338788,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0.102904612379284,3.30418782983798,0.528901133327089,0,0,0.38660238396628,0.605050573870028,0.444756087689741,0.760902504450237,1.89811624617805,1.15289268306808,0.251335208800269,0.994782360205754,0.19496408711912,0.898819408654221,1.51296634912286,1.1948476395262,0,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0,0.123397163921801,0,0,0,0.224862112384854,1.01430060694251,0.72353147925725,0.50925170356284,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0.874442509889552,0.370850604021019,1.36696704638282,0,0.555583582109135,2.0720530270516,3.00727300986255,0.915112692826091,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0.798049746802062,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.468207537349412,0.0640251524048693,0.229741875822453,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.464810523557898,0,0,0,0.214871054048298,0,0.220591419119515,0.695603506861264|short_description=p3@Slc6a20a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102680 | |||
|HGNC= | |||
|MCL_coexpression_id=562 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VDB9 | |||
|association_with_transcript=6bp_to_ENSMUST00000040960_5end | |||
|cluster_id=chr9:123587991..123587996,- | |||
|description=CAGE_peak_3_at_Slc6a20a_5end | |||
|id=chr9:123587991..123587996,- | |||
|ontology_enrichment_celltype=CL:0000239!2.13e-07!6;CL:0000677!2.13e-07!6;CL:0000212!2.13e-07!6;CL:0000584!2.13e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.22e-23,6;CL:0000677,2.22e-23,6;CL:0000584,2.22e-23,6;CL:0000075,5.75e-20,7;CL:0002563,2.07e-15,9;CL:0002251,2.07e-15,9;CL:0002076,5.16e-09,15;CL:0000066,6.23e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.73e-12!59;UBERON:0004923!7.37e-11!24;UBERON:0000344!2.89e-10!15;UBERON:0000160!5.31e-10!43;UBERON:0001242!1.54e-08!13;UBERON:0000060!1.54e-08!13;UBERON:0001262!1.54e-08!13;UBERON:0004786!1.54e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.35e-29,15;UBERON:0004923,7.07e-29,24;UBERON:0001242,5.76e-23,13;UBERON:0001262,5.76e-23,13;UBERON:0004786,5.76e-23,13;UBERON:0000160,2.60e-21,31;UBERON:0005409,3.36e-20,47;UBERON:0003350,2.07e-15,9;UBERON:0004808,2.07e-15,9;UBERON:0001277,2.07e-15,9;UBERON:0000485,1.66e-12,11;UBERON:0001007,2.00e-09,116;UBERON:0001555,2.00e-09,116;UBERON:0007026,2.00e-09,116;UBERON:0004119,3.33e-09,118;UBERON:0000925,3.33e-09,118;UBERON:0006595,3.33e-09,118;UBERON:0001962,3.24e-08,2;UBERON:0001961,3.24e-08,2;UBERON:0001744,3.24e-08,2;UBERON:0004921,2.06e-07,114 | |||
|phase1_expression=0,1.74487703819681,3.63999391511629,2.11724947914781,2.50447864973174,2.35030980676646,2.10251376535973,0,0,0,0,0,0,0,0.999329285446988,1.61980213911861,3.49780939064073,0,0,0,0.17008658030214,0,0,2.07990149631429,1.14704640533585,2.29692785646008,0.86152399231815,0.861884930743556,1.52018735565099,0.504060259519861,1.33038306393183,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,1.32504911076236,0.484875253135222,0,0,0.41889341362691,1.02182822083437,0,0,0,0.299581278809645,0,0,0.869121600961382,0,0.83115217823824,0.811206315338788,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0.102904612379284,3.30418782983798,0.528901133327089,0,0,0.38660238396628,0.605050573870028,0.444756087689741,0.760902504450237,1.89811624617805,1.15289268306808,0.251335208800269,0.994782360205754,0.19496408711912,0.898819408654221,1.51296634912286,1.1948476395262,0,0.114248512609729,0,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0,0.123397163921801,0,0,0,0.224862112384854,1.01430060694251,0.72353147925725,0.50925170356284,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0.874442509889552,0.370850604021019,1.36696704638282,0,0.555583582109135,2.0720530270516,3.00727300986255,0.915112692826091,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0.798049746802062,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.468207537349412,0.0640251524048693,0.229741875822453,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.464810523557898,0,0,0,0.214871054048298,0,0.220591419119515,0.695603506861264 | |||
|short_description=p3@Slc6a20a | |||
}} |
Revision as of 19:22, 4 August 2015
Short description: | p3@Slc6a20a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc6a20a_5end |
Coexpression cluster: | MCL_coexpression_mm9:562 |
Association with transcript: | 6bp_to_ENSMUST00000040960_5end |
EntrezGene: | 102680 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.22e-23 | 6 |
gut absorptive cell | 2.22e-23 | 6 |
enterocyte | 2.22e-23 | 6 |
columnar/cuboidal epithelial cell | 5.75e-20 | 7 |
intestinal epithelial cell | 2.07e-15 | 9 |
epithelial cell of alimentary canal | 2.07e-15 | 9 |
endo-epithelial cell | 5.16e-09 | 15 |
epithelial cell | 6.23e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.35e-29 | 15 |
organ component layer | 7.07e-29 | 24 |
intestinal mucosa | 5.76e-23 | 13 |
wall of intestine | 5.76e-23 | 13 |
gastrointestinal system mucosa | 5.76e-23 | 13 |
intestine | 2.60e-21 | 31 |
gastrointestinal system | 3.36e-20 | 47 |
epithelium of mucosa | 2.07e-15 | 9 |
gastrointestinal system epithelium | 2.07e-15 | 9 |
intestinal epithelium | 2.07e-15 | 9 |
simple columnar epithelium | 1.66e-12 | 11 |
digestive system | 2.00e-09 | 116 |
digestive tract | 2.00e-09 | 116 |
primitive gut | 2.00e-09 | 116 |
endoderm-derived structure | 3.33e-09 | 118 |
endoderm | 3.33e-09 | 118 |
presumptive endoderm | 3.33e-09 | 118 |
gut-associated lymphoid tissue | 3.24e-08 | 2 |
mucosa-associated lymphoid tissue | 3.24e-08 | 2 |
lymphoid tissue | 3.24e-08 | 2 |
subdivision of digestive tract | 2.06e-07 | 114 |