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FFCP PHASE1:Mm9::chr4:130490372..130490383,+: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:130490372..130490383,+|id=chr4:130490372..130490383,+|ontology_enrichment_celltype=CL:0000988!8.96e-17!32;CL:0002032!8.96e-17!32;CL:0000037!8.96e-17!32;CL:0000566!8.96e-17!32;CL:0000837!8.96e-17!32;CL:0000738!2.64e-14!17;CL:0002087!2.64e-14!17;CL:0002031!1.02e-13!25;CL:0002320!3.91e-13!46;CL:0000134!3.91e-13!46;CL:0000838!8.45e-11!12;CL:0000219!1.31e-10!54;CL:0000084!8.83e-10!11;CL:0000827!8.83e-10!11;CL:0000542!1.04e-09!13;CL:0000051!1.04e-09!13;CL:0000049!1.90e-08!19;CL:0000791!7.90e-08!9;CL:0000789!7.90e-08!9;CL:0002420!7.90e-08!9;CL:0002419!7.90e-08!9;CL:0000790!7.90e-08!9;CL:0000557!9.74e-07!7|ontology_enrichment_celltype_v019_2=CL:0000738,1.27e-24,17;CL:0002087,1.27e-24,17;CL:0002194,5.50e-19,4;CL:0000766,5.50e-19,4;CL:0000234,5.50e-19,4;CL:0000576,5.50e-19,4;CL:0000235,5.50e-19,4;CL:0000864,5.50e-19,4;CL:0002009,5.50e-19,4;CL:0000040,5.50e-19,4;CL:0000559,5.50e-19,4;CL:0002320,4.75e-17,46;CL:0000134,4.75e-17,46;CL:0002031,2.77e-16,25;CL:0002092,3.66e-15,3;CL:0002540,3.66e-15,3;CL:0000988,4.24e-15,32;CL:0002032,4.24e-15,32;CL:0000037,4.24e-15,32;CL:0000837,4.24e-15,32;CL:0000219,3.47e-14,54;CL:0000838,1.86e-12,12;CL:0000034,2.70e-12,97;CL:0000542,1.81e-11,13;CL:0000051,1.81e-11,13;CL:0000473,6.34e-11,7;CL:0000557,6.34e-11,7;CL:0002476,2.24e-10,2;CL:0000878,2.77e-10,2;CL:0000129,2.77e-10,2;CL:0000723,3.48e-10,91;CL:0000048,3.48e-10,91;CL:0000084,9.68e-10,11;CL:0000827,9.68e-10,11;CL:0000791,5.47e-08,9;CL:0000789,5.47e-08,9;CL:0002420,5.47e-08,9;CL:0002419,5.47e-08,9;CL:0000790,5.47e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,7.34e-07,3;DOID:4045,7.34e-07,3|ontology_enrichment_uberon=UBERON:0002193!1.60e-21!48;UBERON:0002390!3.49e-20!45;UBERON:0003061!3.49e-20!45;UBERON:0002405!8.48e-17!70;UBERON:0002384!3.91e-13!46;UBERON:0002371!2.64e-11!16;UBERON:0004177!3.83e-10!29;UBERON:0003081!2.54e-09!88;UBERON:0002370!5.01e-09!23;UBERON:0000974!5.01e-09!23;UBERON:0004807!5.01e-09!23;UBERON:0005058!5.01e-09!23;UBERON:0003351!5.01e-09!23;UBERON:0009113!5.01e-09!23;UBERON:0003295!5.01e-09!23;UBERON:0009722!5.01e-09!23;UBERON:0005562!5.01e-09!23;UBERON:0007690!5.01e-09!23;UBERON:0006562!1.86e-08!24;UBERON:0003408!1.86e-08!24;UBERON:0001557!1.86e-08!24;UBERON:0001042!1.86e-08!24;UBERON:0008814!1.86e-08!24;UBERON:0009145!1.86e-08!24;UBERON:0005057!3.64e-07!51;UBERON:0001474!4.13e-07!22;UBERON:0004765!4.13e-07!22;UBERON:0001434!4.13e-07!22;UBERON:0000072!5.15e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.75e-17,46;UBERON:0002371,8.02e-14,16;UBERON:0002204,1.39e-10,32;UBERON:0001474,7.84e-10,22;UBERON:0004765,7.84e-10,22;UBERON:0001434,7.84e-10,22;UBERON:0002193,4.04e-08,48;UBERON:0002405,4.04e-08,48;UBERON:0002390,4.58e-07,45;UBERON:0003061,4.58e-07,45|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.985521055061667,0.468129052643987,0,0.0797721589953364,1.36960583944965,1.66098764596095,0.333109761815663,0.202475267389826,0,0.473193248037357,0.822686601634433,0,0,0.595745707205312,1.30599894569468,0.799962113967033,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0,2.09409497589519,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,3.36093799142464,0,0,0,0,0,0,0,0,3.5995988691256,20.7661936139065,9.2362414942993,2.39680088414724,2.68952813725088,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,1.7972268675888,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,7.53956419696361,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.509935289981566,1.11961161858926,1.65839968565309,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0.360586348559907,0.590758108698309,0.100966449948148,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.467507608726276,0,0.221985953374065,0,0,0,0.375364950902364,0.183151624267265,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr4:130490372..130490383,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=38
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr4:130490372..130490383,+
|description=CAGE_peak_at_chr4:130490372..130490383,+
|id=chr4:130490372..130490383,+
|ontology_enrichment_celltype=CL:0000988!8.96e-17!32;CL:0002032!8.96e-17!32;CL:0000037!8.96e-17!32;CL:0000566!8.96e-17!32;CL:0000837!8.96e-17!32;CL:0000738!2.64e-14!17;CL:0002087!2.64e-14!17;CL:0002031!1.02e-13!25;CL:0002320!3.91e-13!46;CL:0000134!3.91e-13!46;CL:0000838!8.45e-11!12;CL:0000219!1.31e-10!54;CL:0000084!8.83e-10!11;CL:0000827!8.83e-10!11;CL:0000542!1.04e-09!13;CL:0000051!1.04e-09!13;CL:0000049!1.90e-08!19;CL:0000791!7.90e-08!9;CL:0000789!7.90e-08!9;CL:0002420!7.90e-08!9;CL:0002419!7.90e-08!9;CL:0000790!7.90e-08!9;CL:0000557!9.74e-07!7
|ontology_enrichment_celltype_v019_2=CL:0000738,1.27e-24,17;CL:0002087,1.27e-24,17;CL:0002194,5.50e-19,4;CL:0000766,5.50e-19,4;CL:0000234,5.50e-19,4;CL:0000576,5.50e-19,4;CL:0000235,5.50e-19,4;CL:0000864,5.50e-19,4;CL:0002009,5.50e-19,4;CL:0000040,5.50e-19,4;CL:0000559,5.50e-19,4;CL:0002320,4.75e-17,46;CL:0000134,4.75e-17,46;CL:0002031,2.77e-16,25;CL:0002092,3.66e-15,3;CL:0002540,3.66e-15,3;CL:0000988,4.24e-15,32;CL:0002032,4.24e-15,32;CL:0000037,4.24e-15,32;CL:0000837,4.24e-15,32;CL:0000219,3.47e-14,54;CL:0000838,1.86e-12,12;CL:0000034,2.70e-12,97;CL:0000542,1.81e-11,13;CL:0000051,1.81e-11,13;CL:0000473,6.34e-11,7;CL:0000557,6.34e-11,7;CL:0002476,2.24e-10,2;CL:0000878,2.77e-10,2;CL:0000129,2.77e-10,2;CL:0000723,3.48e-10,91;CL:0000048,3.48e-10,91;CL:0000084,9.68e-10,11;CL:0000827,9.68e-10,11;CL:0000791,5.47e-08,9;CL:0000789,5.47e-08,9;CL:0002420,5.47e-08,9;CL:0002419,5.47e-08,9;CL:0000790,5.47e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,7.34e-07,3;DOID:4045,7.34e-07,3
|ontology_enrichment_uberon=UBERON:0002193!1.60e-21!48;UBERON:0002390!3.49e-20!45;UBERON:0003061!3.49e-20!45;UBERON:0002405!8.48e-17!70;UBERON:0002384!3.91e-13!46;UBERON:0002371!2.64e-11!16;UBERON:0004177!3.83e-10!29;UBERON:0003081!2.54e-09!88;UBERON:0002370!5.01e-09!23;UBERON:0000974!5.01e-09!23;UBERON:0004807!5.01e-09!23;UBERON:0005058!5.01e-09!23;UBERON:0003351!5.01e-09!23;UBERON:0009113!5.01e-09!23;UBERON:0003295!5.01e-09!23;UBERON:0009722!5.01e-09!23;UBERON:0005562!5.01e-09!23;UBERON:0007690!5.01e-09!23;UBERON:0006562!1.86e-08!24;UBERON:0003408!1.86e-08!24;UBERON:0001557!1.86e-08!24;UBERON:0001042!1.86e-08!24;UBERON:0008814!1.86e-08!24;UBERON:0009145!1.86e-08!24;UBERON:0005057!3.64e-07!51;UBERON:0001474!4.13e-07!22;UBERON:0004765!4.13e-07!22;UBERON:0001434!4.13e-07!22;UBERON:0000072!5.15e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.75e-17,46;UBERON:0002371,8.02e-14,16;UBERON:0002204,1.39e-10,32;UBERON:0001474,7.84e-10,22;UBERON:0004765,7.84e-10,22;UBERON:0001434,7.84e-10,22;UBERON:0002193,4.04e-08,48;UBERON:0002405,4.04e-08,48;UBERON:0002390,4.58e-07,45;UBERON:0003061,4.58e-07,45
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.985521055061667,0.468129052643987,0,0.0797721589953364,1.36960583944965,1.66098764596095,0.333109761815663,0.202475267389826,0,0.473193248037357,0.822686601634433,0,0,0.595745707205312,1.30599894569468,0.799962113967033,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0,2.09409497589519,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,3.36093799142464,0,0,0,0,0,0,0,0,3.5995988691256,20.7661936139065,9.2362414942993,2.39680088414724,2.68952813725088,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,1.7972268675888,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0,0,0,7.53956419696361,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.509935289981566,1.11961161858926,1.65839968565309,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0.360586348559907,0.590758108698309,0.100966449948148,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.467507608726276,0,0.221985953374065,0,0,0,0.375364950902364,0.183151624267265,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0
|short_description=p@chr4:130490372..130490383,+
}}

Latest revision as of 20:30, 4 August 2015

Short description:p@chr4:130490372..130490383, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:130490372..130490383, +
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr4:130490372..130490383+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
leukocyte1.27e-2417
nongranular leukocyte1.27e-2417
monopoietic cell5.50e-194
myeloid leukocyte5.50e-194
phagocyte5.50e-194
monocyte5.50e-194
macrophage5.50e-194
tissue-resident macrophage5.50e-194
macrophage dendritic cell progenitor5.50e-194
monoblast5.50e-194
promonocyte5.50e-194
connective tissue cell4.75e-1746
mesenchymal cell4.75e-1746
hematopoietic lineage restricted progenitor cell2.77e-1625
bone marrow cell3.66e-153
mesenchymal stem cell of the bone marrow3.66e-153
hematopoietic cell4.24e-1532
hematopoietic oligopotent progenitor cell4.24e-1532
hematopoietic stem cell4.24e-1532
hematopoietic multipotent progenitor cell4.24e-1532
motile cell3.47e-1454
lymphoid lineage restricted progenitor cell1.86e-1212
stem cell2.70e-1297
lymphocyte1.81e-1113
common lymphoid progenitor1.81e-1113
defensive cell6.34e-117
granulocyte monocyte progenitor cell6.34e-117
bone marrow macrophage2.24e-102
central nervous system macrophage2.77e-102
microglial cell2.77e-102
somatic stem cell3.48e-1091
multi fate stem cell3.48e-1091
T cell9.68e-1011
pro-T cell9.68e-1011
mature alpha-beta T cell5.47e-089
alpha-beta T cell5.47e-089
immature T cell5.47e-089
mature T cell5.47e-089
immature alpha-beta T cell5.47e-089

Uber anatomy
Ontology termp-valuen
connective tissue4.75e-1746
bone marrow8.02e-1416
musculoskeletal system1.39e-1032
bone element7.84e-1022
skeletal element7.84e-1022
skeletal system7.84e-1022
hemolymphoid system4.04e-0848
immune system4.04e-0848
hematopoietic system4.58e-0745
blood island4.58e-0745

Disease
Ontology termp-valuen
musculoskeletal system cancer7.34e-073
muscle cancer7.34e-073
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