FFCP PHASE1:Mm9::chr5:99756112..99756132,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:99756112..99756132,- | |||
|description=CAGE_peak_at_chr5:99756112..99756132,- | |description=CAGE_peak_at_chr5:99756112..99756132,- | ||
|id=chr5:99756112..99756132,- | |id=chr5:99756112..99756132,- | ||
|ontology_enrichment_celltype=CL:0002563!1.27e-16!9;CL:0002251!1.27e-16!9;CL:0000066!4.46e-13!25;CL:0000063!1.23e-12!66;CL:0000239!3.39e-10!6;CL:0000677!3.39e-10!6;CL:0000212!3.39e-10!6;CL:0000584!3.39e-10!6;CL:0000223!3.97e-10!20;CL:0002076!2.57e-09!15;CL:0000075!1.16e-08!7;CL:0002250!3.65e-08!3 | |ontology_enrichment_celltype=CL:0002563!1.27e-16!9;CL:0002251!1.27e-16!9;CL:0000066!4.46e-13!25;CL:0000063!1.23e-12!66;CL:0000239!3.39e-10!6;CL:0000677!3.39e-10!6;CL:0000212!3.39e-10!6;CL:0000584!3.39e-10!6;CL:0000223!3.97e-10!20;CL:0002076!2.57e-09!15;CL:0000075!1.16e-08!7;CL:0002250!3.65e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.18e-43,9;CL:0002251,1.18e-43,9;CL:0000239,3.96e-29,6;CL:0000677,3.96e-29,6;CL:0000584,3.96e-29,6;CL:0002076,2.53e-26,15;CL:0000075,4.67e-25,7;CL:0000223,8.39e-20,20;CL:0002250,5.28e-16,3;CL:0000066,7.05e-16,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!4.68e-20!13;UBERON:0000060!4.68e-20!13;UBERON:0001262!4.68e-20!13;UBERON:0004786!4.68e-20!13;UBERON:0000344!4.97e-17!15;UBERON:0003350!1.27e-16!9;UBERON:0004808!1.27e-16!9;UBERON:0001277!1.27e-16!9;UBERON:0000485!2.79e-16!11;UBERON:0005409!2.85e-10!59;UBERON:0004923!1.11e-09!24;UBERON:0000160!1.16e-09!43 | |ontology_enrichment_uberon=UBERON:0001242!4.68e-20!13;UBERON:0000060!4.68e-20!13;UBERON:0001262!4.68e-20!13;UBERON:0004786!4.68e-20!13;UBERON:0000344!4.97e-17!15;UBERON:0003350!1.27e-16!9;UBERON:0004808!1.27e-16!9;UBERON:0001277!1.27e-16!9;UBERON:0000485!2.79e-16!11;UBERON:0005409!2.85e-10!59;UBERON:0004923!1.11e-09!24;UBERON:0000160!1.16e-09!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.18e-43,9;UBERON:0004808,1.18e-43,9;UBERON:0001277,1.18e-43,9;UBERON:0000485,8.77e-36,11;UBERON:0001242,2.50e-30,13;UBERON:0001262,2.50e-30,13;UBERON:0004786,2.50e-30,13;UBERON:0000344,2.53e-26,15;UBERON:0004923,1.56e-16,24;UBERON:0000160,7.88e-13,31;UBERON:0005409,1.92e-11,47;UBERON:0003929,3.05e-07,55 | |||
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,2.72217790176147,1.50268718983904,0.671517087647559,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0,0.0992909512008853,0,0,0,0.57423196411502,0,0.861884930743556,0,0.252030129759931,0.221730510655305,0,0,0,6.06588401477677,0.664938581433969,4.69589519403449,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67741174308288,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.495920734352016,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,2.72217790176147,1.50268718983904,0.671517087647559,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0,0.0992909512008853,0,0,0,0.57423196411502,0,0.861884930743556,0,0.252030129759931,0.221730510655305,0,0,0,6.06588401477677,0.664938581433969,4.69589519403449,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67741174308288,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.495920734352016,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:99756112..99756132,- | |short_description=p@chr5:99756112..99756132,- | ||
}} | }} |
Latest revision as of 20:38, 4 August 2015
Short description: | p@chr5:99756112..99756132, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:99756112..99756132, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.18e-43 | 9 |
epithelial cell of alimentary canal | 1.18e-43 | 9 |
brush border epithelial cell | 3.96e-29 | 6 |
gut absorptive cell | 3.96e-29 | 6 |
enterocyte | 3.96e-29 | 6 |
endo-epithelial cell | 2.53e-26 | 15 |
columnar/cuboidal epithelial cell | 4.67e-25 | 7 |
endodermal cell | 8.39e-20 | 20 |
intestinal crypt stem cell | 5.28e-16 | 3 |
epithelial cell | 7.05e-16 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.18e-43 | 9 |
gastrointestinal system epithelium | 1.18e-43 | 9 |
intestinal epithelium | 1.18e-43 | 9 |
simple columnar epithelium | 8.77e-36 | 11 |
intestinal mucosa | 2.50e-30 | 13 |
wall of intestine | 2.50e-30 | 13 |
gastrointestinal system mucosa | 2.50e-30 | 13 |
mucosa | 2.53e-26 | 15 |
organ component layer | 1.56e-16 | 24 |
intestine | 7.88e-13 | 31 |
gastrointestinal system | 1.92e-11 | 47 |
gut epithelium | 3.05e-07 | 55 |