FFCP PHASE1:Mm9::chr17:36305458..36305473,-: Difference between revisions
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{{FFCP|EntrezGene=667977|HGNC=|MCL_coexpression_id=24|UniProt=E9Q0G4,G3UXE9,G3UXN9,A7VMS6|association_with_transcript=0bp_to_ENSMUST00000097335,ENSMUST00000173353,ENSMUST00000173440,uc008ckl.1,uc012asn.1_5end|description=CAGE_peak_2_at_Gm8909_5end|id=chr17:36305458..36305473,-|ontology_enrichment_celltype=CL:0002563!3.48e-13!9;CL:0002251!3.48e-13!9;CL:0000239!2.90e-12!6;CL:0000677!2.90e-12!6;CL:0000212!2.90e-12!6;CL:0000584!2.90e-12!6;CL:0000075!2.26e-10!7;CL:0000066!1.85e-07!25;CL:0002076!2.94e-07!15;CL:0000473!7.16e-07!3;CL:0000627!7.16e-07!3;CL:0000682!7.16e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,4.04e-18,6;CL:0000677,4.04e-18,6;CL:0000584,4.04e-18,6;CL:0002563,1.42e-15,9;CL:0002251,1.42e-15,9;CL:0000075,1.93e-15,7;CL:0000066,2.78e-10,25;CL:0000682,8.68e-10,3;CL:0002076,5.90e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.88e-25!43;UBERON:0000344!1.21e-23!15;UBERON:0001242!2.43e-20!13;UBERON:0000060!2.43e-20!13;UBERON:0001262!2.43e-20!13;UBERON:0004786!2.43e-20!13;UBERON:0005409!7.08e-18!59;UBERON:0004923!2.37e-13!24;UBERON:0003350!3.48e-13!9;UBERON:0004808!3.48e-13!9;UBERON:0001277!3.48e-13!9;UBERON:0000485!1.75e-10!11;UBERON:0001007!1.13e-07!128;UBERON:0001555!1.13e-07!128;UBERON:0007026!1.13e-07!128;UBERON:0004119!1.96e-07!130;UBERON:0000925!1.96e-07!130;UBERON:0006595!1.96e-07!130;UBERON:0000331!7.48e-07!3;UBERON:0002116!7.48e-07!3;UBERON:0001204!7.48e-07!3;UBERON:0001168!7.48e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.78e-46,31;UBERON:0005409,1.01e-31,47;UBERON:0000344,2.12e-31,15;UBERON:0001242,2.42e-26,13;UBERON:0001262,2.42e-26,13;UBERON:0004786,2.42e-26,13;UBERON:0004923,1.34e-18,24;UBERON:0003350,1.42e-15,9;UBERON:0004808,1.42e-15,9;UBERON:0001277,1.42e-15,9;UBERON:0000485,1.44e-12,11;UBERON:0002108,2.19e-12,4;UBERON:0001007,3.38e-12,116;UBERON:0001555,3.38e-12,116;UBERON:0007026,3.38e-12,116;UBERON:0004119,6.68e-12,118;UBERON:0000925,6.68e-12,118;UBERON:0006595,6.68e-12,118;UBERON:0004921,3.66e-10,114;UBERON:0000331,9.29e-10,3;UBERON:0002116,9.29e-10,3;UBERON:0001204,9.29e-10,3;UBERON:0001168,9.29e-10,3|phase1_expression=0,66.654302859118,63.699893514535,71.0790896571051,111.699747778035,4.02910252588535,2.10251376535973,0,0,0.936258105287974,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03966660290989,11.6998733344257,37.3250776674763,24.1226717849082,18.3150547783006,26.9833255628051,31.7557963497513,7.09537634096975,0,0,0,0.866554859253824,1.16364251750945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,5.48082622651488,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.770825115873,19.5693419331023,0,0,0,0,0.667134131534611,3.23383564391351,29.8953308773042,6.75265714368445,7.03738584640755,8.35617182572834,9.55324026883689,26.9645822596266,21.8299430373441,26.4857893428308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.569581910609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.578727661391115,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p2@Gm8909}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:667977 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q0G4,uniprot:G3UXE9,uniprot:G3UXN9,uniprot:A7VMS6 | |||
|association_with_transcript=0bp_to_ENSMUST00000097335,ENSMUST00000173353,ENSMUST00000173440,uc008ckl.1,uc012asn.1_5end | |||
|cluster_id=chr17:36305458..36305473,- | |||
|description=CAGE_peak_2_at_Gm8909_5end | |||
|id=chr17:36305458..36305473,- | |||
|ontology_enrichment_celltype=CL:0002563!3.48e-13!9;CL:0002251!3.48e-13!9;CL:0000239!2.90e-12!6;CL:0000677!2.90e-12!6;CL:0000212!2.90e-12!6;CL:0000584!2.90e-12!6;CL:0000075!2.26e-10!7;CL:0000066!1.85e-07!25;CL:0002076!2.94e-07!15;CL:0000473!7.16e-07!3;CL:0000627!7.16e-07!3;CL:0000682!7.16e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.04e-18,6;CL:0000677,4.04e-18,6;CL:0000584,4.04e-18,6;CL:0002563,1.42e-15,9;CL:0002251,1.42e-15,9;CL:0000075,1.93e-15,7;CL:0000066,2.78e-10,25;CL:0000682,8.68e-10,3;CL:0002076,5.90e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.88e-25!43;UBERON:0000344!1.21e-23!15;UBERON:0001242!2.43e-20!13;UBERON:0000060!2.43e-20!13;UBERON:0001262!2.43e-20!13;UBERON:0004786!2.43e-20!13;UBERON:0005409!7.08e-18!59;UBERON:0004923!2.37e-13!24;UBERON:0003350!3.48e-13!9;UBERON:0004808!3.48e-13!9;UBERON:0001277!3.48e-13!9;UBERON:0000485!1.75e-10!11;UBERON:0001007!1.13e-07!128;UBERON:0001555!1.13e-07!128;UBERON:0007026!1.13e-07!128;UBERON:0004119!1.96e-07!130;UBERON:0000925!1.96e-07!130;UBERON:0006595!1.96e-07!130;UBERON:0000331!7.48e-07!3;UBERON:0002116!7.48e-07!3;UBERON:0001204!7.48e-07!3;UBERON:0001168!7.48e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.78e-46,31;UBERON:0005409,1.01e-31,47;UBERON:0000344,2.12e-31,15;UBERON:0001242,2.42e-26,13;UBERON:0001262,2.42e-26,13;UBERON:0004786,2.42e-26,13;UBERON:0004923,1.34e-18,24;UBERON:0003350,1.42e-15,9;UBERON:0004808,1.42e-15,9;UBERON:0001277,1.42e-15,9;UBERON:0000485,1.44e-12,11;UBERON:0002108,2.19e-12,4;UBERON:0001007,3.38e-12,116;UBERON:0001555,3.38e-12,116;UBERON:0007026,3.38e-12,116;UBERON:0004119,6.68e-12,118;UBERON:0000925,6.68e-12,118;UBERON:0006595,6.68e-12,118;UBERON:0004921,3.66e-10,114;UBERON:0000331,9.29e-10,3;UBERON:0002116,9.29e-10,3;UBERON:0001204,9.29e-10,3;UBERON:0001168,9.29e-10,3 | |||
|phase1_expression=0,66.654302859118,63.699893514535,71.0790896571051,111.699747778035,4.02910252588535,2.10251376535973,0,0,0.936258105287974,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03966660290989,11.6998733344257,37.3250776674763,24.1226717849082,18.3150547783006,26.9833255628051,31.7557963497513,7.09537634096975,0,0,0,0.866554859253824,1.16364251750945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,5.48082622651488,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.770825115873,19.5693419331023,0,0,0,0,0.667134131534611,3.23383564391351,29.8953308773042,6.75265714368445,7.03738584640755,8.35617182572834,9.55324026883689,26.9645822596266,21.8299430373441,26.4857893428308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.569581910609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.578727661391115,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p2@Gm8909 | |||
}} |
Revision as of 20:42, 4 August 2015
Short description: | p2@Gm8909 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm8909_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000097335, ENSMUST00000173353, ENSMUST00000173440, uc008ckl.1, uc012asn.1_5end |
EntrezGene: | 667977 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.04e-18 | 6 |
gut absorptive cell | 4.04e-18 | 6 |
enterocyte | 4.04e-18 | 6 |
intestinal epithelial cell | 1.42e-15 | 9 |
epithelial cell of alimentary canal | 1.42e-15 | 9 |
columnar/cuboidal epithelial cell | 1.93e-15 | 7 |
epithelial cell | 2.78e-10 | 25 |
M cell of gut | 8.68e-10 | 3 |
endo-epithelial cell | 5.90e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.78e-46 | 31 |
gastrointestinal system | 1.01e-31 | 47 |
mucosa | 2.12e-31 | 15 |
intestinal mucosa | 2.42e-26 | 13 |
wall of intestine | 2.42e-26 | 13 |
gastrointestinal system mucosa | 2.42e-26 | 13 |
organ component layer | 1.34e-18 | 24 |
epithelium of mucosa | 1.42e-15 | 9 |
gastrointestinal system epithelium | 1.42e-15 | 9 |
intestinal epithelium | 1.42e-15 | 9 |
simple columnar epithelium | 1.44e-12 | 11 |
small intestine | 2.19e-12 | 4 |
digestive system | 3.38e-12 | 116 |
digestive tract | 3.38e-12 | 116 |
primitive gut | 3.38e-12 | 116 |
endoderm-derived structure | 6.68e-12 | 118 |
endoderm | 6.68e-12 | 118 |
presumptive endoderm | 6.68e-12 | 118 |
subdivision of digestive tract | 3.66e-10 | 114 |
ileal mucosa | 9.29e-10 | 3 |
ileum | 9.29e-10 | 3 |
mucosa of small intestine | 9.29e-10 | 3 |
wall of small intestine | 9.29e-10 | 3 |