FFCP PHASE1:Mm9::chr17:37004048..37004055,-: Difference between revisions
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{{FFCP|EntrezGene=69097|HGNC=|MCL_coexpression_id=219|UniProt=Q8R096|association_with_transcript=76bp_to_ENSMUST00000025329,NM_001024134_5end|description=CAGE_peak_4_at_Trim15_5end|id=chr17:37004048..37004055,-|ontology_enrichment_celltype=CL:0000066!1.76e-13!25;CL:0000239!2.21e-13!6;CL:0000677!2.21e-13!6;CL:0000212!2.21e-13!6;CL:0000584!2.21e-13!6;CL:0002076!2.64e-12!15;CL:0000075!2.01e-11!7;CL:0000473!9.55e-11!3;CL:0000627!9.55e-11!3;CL:0000682!9.55e-11!3;CL:0000068!1.13e-09!3;CL:0002202!1.13e-09!3;CL:0000069!1.13e-09!3;CL:0002632!1.13e-09!3;CL:0002368!1.13e-09!3;CL:0000307!1.13e-09!3;CL:0000377!1.13e-09!3;CL:0000223!6.61e-09!20;CL:0002563!8.28e-09!9;CL:0002251!8.28e-09!9|ontology_enrichment_celltype_v019_2=CL:0000682,5.70e-30,3;CL:0000239,3.13e-15,6;CL:0000677,3.13e-15,6;CL:0000584,3.13e-15,6;CL:0000066,4.69e-14,25;CL:0000473,2.80e-13,7;CL:0000075,3.73e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.16e-19!15;UBERON:0004923!2.55e-16!24;UBERON:0001242!6.56e-15!13;UBERON:0000060!6.56e-15!13;UBERON:0001262!6.56e-15!13;UBERON:0004786!6.56e-15!13;UBERON:0000160!1.72e-11!43;UBERON:0003126!1.13e-09!3;UBERON:0001005!1.13e-09!3;UBERON:0007196!1.13e-09!3;UBERON:0001558!1.13e-09!3;UBERON:0005409!6.69e-09!59;UBERON:0003350!8.28e-09!9;UBERON:0004808!8.28e-09!9;UBERON:0001277!8.28e-09!9;UBERON:0000485!3.85e-07!11;UBERON:0004119!5.94e-07!130;UBERON:0000925!5.94e-07!130;UBERON:0006595!5.94e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.70e-19,13;UBERON:0001262,5.70e-19,13;UBERON:0004786,5.70e-19,13;UBERON:0000344,1.79e-16,15;UBERON:0000160,2.80e-11,31;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0004923,2.30e-10,24;UBERON:0000485,1.33e-08,11;UBERON:0005409,2.06e-07,47|phase1_expression=0,2.09385244583617,1.36499771816861,0.60492842261366,0,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,2.29692785646008,1.29228598847722,1.939241094173,0.570070258369122,0,4.43461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p4@Trim15}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69097 | |||
|HGNC= | |||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R096 | |||
|association_with_transcript=76bp_to_ENSMUST00000025329,NM_001024134_5end | |||
|cluster_id=chr17:37004048..37004055,- | |||
|description=CAGE_peak_4_at_Trim15_5end | |||
|id=chr17:37004048..37004055,- | |||
|ontology_enrichment_celltype=CL:0000066!1.76e-13!25;CL:0000239!2.21e-13!6;CL:0000677!2.21e-13!6;CL:0000212!2.21e-13!6;CL:0000584!2.21e-13!6;CL:0002076!2.64e-12!15;CL:0000075!2.01e-11!7;CL:0000473!9.55e-11!3;CL:0000627!9.55e-11!3;CL:0000682!9.55e-11!3;CL:0000068!1.13e-09!3;CL:0002202!1.13e-09!3;CL:0000069!1.13e-09!3;CL:0002632!1.13e-09!3;CL:0002368!1.13e-09!3;CL:0000307!1.13e-09!3;CL:0000377!1.13e-09!3;CL:0000223!6.61e-09!20;CL:0002563!8.28e-09!9;CL:0002251!8.28e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.70e-30,3;CL:0000239,3.13e-15,6;CL:0000677,3.13e-15,6;CL:0000584,3.13e-15,6;CL:0000066,4.69e-14,25;CL:0000473,2.80e-13,7;CL:0000075,3.73e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.16e-19!15;UBERON:0004923!2.55e-16!24;UBERON:0001242!6.56e-15!13;UBERON:0000060!6.56e-15!13;UBERON:0001262!6.56e-15!13;UBERON:0004786!6.56e-15!13;UBERON:0000160!1.72e-11!43;UBERON:0003126!1.13e-09!3;UBERON:0001005!1.13e-09!3;UBERON:0007196!1.13e-09!3;UBERON:0001558!1.13e-09!3;UBERON:0005409!6.69e-09!59;UBERON:0003350!8.28e-09!9;UBERON:0004808!8.28e-09!9;UBERON:0001277!8.28e-09!9;UBERON:0000485!3.85e-07!11;UBERON:0004119!5.94e-07!130;UBERON:0000925!5.94e-07!130;UBERON:0006595!5.94e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.70e-19,13;UBERON:0001262,5.70e-19,13;UBERON:0004786,5.70e-19,13;UBERON:0000344,1.79e-16,15;UBERON:0000160,2.80e-11,31;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0004923,2.30e-10,24;UBERON:0000485,1.33e-08,11;UBERON:0005409,2.06e-07,47 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,0.60492842261366,0,0.503637815735669,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.45881856213434,2.29692785646008,1.29228598847722,1.939241094173,0.570070258369122,0,4.43461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,1.08069024937347,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Trim15 | |||
}} |
Revision as of 20:47, 4 August 2015
Short description: | p4@Trim15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trim15_5end |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | 76bp_to_ENSMUST00000025329, NM_001024134_5end |
EntrezGene: | 69097 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.70e-30 | 3 |
brush border epithelial cell | 3.13e-15 | 6 |
gut absorptive cell | 3.13e-15 | 6 |
enterocyte | 3.13e-15 | 6 |
epithelial cell | 4.69e-14 | 25 |
defensive cell | 2.80e-13 | 7 |
columnar/cuboidal epithelial cell | 3.73e-13 | 7 |
intestinal epithelial cell | 2.23e-10 | 9 |
epithelial cell of alimentary canal | 2.23e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.70e-19 | 13 |
wall of intestine | 5.70e-19 | 13 |
gastrointestinal system mucosa | 5.70e-19 | 13 |
mucosa | 1.79e-16 | 15 |
intestine | 2.80e-11 | 31 |
epithelium of mucosa | 2.23e-10 | 9 |
gastrointestinal system epithelium | 2.23e-10 | 9 |
intestinal epithelium | 2.23e-10 | 9 |
organ component layer | 2.30e-10 | 24 |
simple columnar epithelium | 1.33e-08 | 11 |
gastrointestinal system | 2.06e-07 | 47 |