FFCP PHASE1:Mm9::chr6:113589357..113589371,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2313 | |MCL_coexpression_id=2313 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:113589357..113589371,- | |||
|description=CAGE_peak_at_chr6:113589357..113589371,- | |description=CAGE_peak_at_chr6:113589357..113589371,- | ||
|id=chr6:113589357..113589371,- | |id=chr6:113589357..113589371,- | ||
|ontology_enrichment_celltype=CL:0002563!2.19e-18!9;CL:0002251!2.19e-18!9;CL:0000239!2.19e-16!6;CL:0000677!2.19e-16!6;CL:0000212!2.19e-16!6;CL:0000584!2.19e-16!6;CL:0000066!7.62e-16!25;CL:0000075!6.27e-14!7;CL:0000223!9.50e-12!20;CL:0002076!1.95e-10!15;CL:0000473!3.79e-09!3;CL:0000627!3.79e-09!3;CL:0000682!3.79e-09!3 | |ontology_enrichment_celltype=CL:0002563!2.19e-18!9;CL:0002251!2.19e-18!9;CL:0000239!2.19e-16!6;CL:0000677!2.19e-16!6;CL:0000212!2.19e-16!6;CL:0000584!2.19e-16!6;CL:0000066!7.62e-16!25;CL:0000075!6.27e-14!7;CL:0000223!9.50e-12!20;CL:0002076!1.95e-10!15;CL:0000473!3.79e-09!3;CL:0000627!3.79e-09!3;CL:0000682!3.79e-09!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.80e-33,3;CL:0000239,1.03e-29,6;CL:0000677,1.03e-29,6;CL:0000584,1.03e-29,6;CL:0000075,1.48e-25,7;CL:0000066,1.68e-21,25;CL:0002563,5.25e-20,9;CL:0002251,5.25e-20,9;CL:0000473,9.96e-15,7;CL:0002076,3.35e-12,15;CL:0000223,2.97e-09,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.39e-23!15;UBERON:0001242!4.12e-23!13;UBERON:0000060!4.12e-23!13;UBERON:0001262!4.12e-23!13;UBERON:0004786!4.12e-23!13;UBERON:0000160!1.76e-19!43;UBERON:0003350!2.19e-18!9;UBERON:0004808!2.19e-18!9;UBERON:0001277!2.19e-18!9;UBERON:0000485!9.01e-15!11;UBERON:0005409!2.36e-14!59;UBERON:0004923!1.79e-13!24;UBERON:0001007!1.12e-07!128;UBERON:0001555!1.12e-07!128;UBERON:0007026!1.12e-07!128;UBERON:0004119!1.80e-07!130;UBERON:0000925!1.80e-07!130;UBERON:0006595!1.80e-07!130;UBERON:0004921!4.28e-07!126;UBERON:0004185!4.28e-07!126 | |ontology_enrichment_uberon=UBERON:0000344!3.39e-23!15;UBERON:0001242!4.12e-23!13;UBERON:0000060!4.12e-23!13;UBERON:0001262!4.12e-23!13;UBERON:0004786!4.12e-23!13;UBERON:0000160!1.76e-19!43;UBERON:0003350!2.19e-18!9;UBERON:0004808!2.19e-18!9;UBERON:0001277!2.19e-18!9;UBERON:0000485!9.01e-15!11;UBERON:0005409!2.36e-14!59;UBERON:0004923!1.79e-13!24;UBERON:0001007!1.12e-07!128;UBERON:0001555!1.12e-07!128;UBERON:0007026!1.12e-07!128;UBERON:0004119!1.80e-07!130;UBERON:0000925!1.80e-07!130;UBERON:0006595!1.80e-07!130;UBERON:0004921!4.28e-07!126;UBERON:0004185!4.28e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.88e-21,13;UBERON:0001262,2.88e-21,13;UBERON:0004786,2.88e-21,13;UBERON:0003350,5.25e-20,9;UBERON:0004808,5.25e-20,9;UBERON:0001277,5.25e-20,9;UBERON:0000344,1.77e-18,15;UBERON:0000485,1.83e-16,11;UBERON:0004923,1.18e-11,24;UBERON:0000160,4.54e-09,31 | |||
|phase1_expression=0,1.04692622291808,11.3749809847384,3.32710632437513,2.50447864973174,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,1.72269589234506,2.58457197695445,2.15471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,11.3749809847384,3.32710632437513,2.50447864973174,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,1.72269589234506,2.58457197695445,2.15471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:113589357..113589371,- | |short_description=p@chr6:113589357..113589371,- | ||
}} | }} |
Latest revision as of 22:18, 4 August 2015
Short description: | p@chr6:113589357..113589371, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:113589357..113589371, - |
Coexpression cluster: | MCL_coexpression_mm9:2313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.80e-33 | 3 |
brush border epithelial cell | 1.03e-29 | 6 |
gut absorptive cell | 1.03e-29 | 6 |
enterocyte | 1.03e-29 | 6 |
columnar/cuboidal epithelial cell | 1.48e-25 | 7 |
epithelial cell | 1.68e-21 | 25 |
intestinal epithelial cell | 5.25e-20 | 9 |
epithelial cell of alimentary canal | 5.25e-20 | 9 |
defensive cell | 9.96e-15 | 7 |
endo-epithelial cell | 3.35e-12 | 15 |
endodermal cell | 2.97e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.88e-21 | 13 |
wall of intestine | 2.88e-21 | 13 |
gastrointestinal system mucosa | 2.88e-21 | 13 |
epithelium of mucosa | 5.25e-20 | 9 |
gastrointestinal system epithelium | 5.25e-20 | 9 |
intestinal epithelium | 5.25e-20 | 9 |
mucosa | 1.77e-18 | 15 |
simple columnar epithelium | 1.83e-16 | 11 |
organ component layer | 1.18e-11 | 24 |
intestine | 4.54e-09 | 31 |