FFCP PHASE1:Mm9::chr4:138388869..138388884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=499 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-289bp_to_ENSMUST00000147728_5end | |association_with_transcript=-289bp_to_ENSMUST00000147728_5end | ||
|cluster_id=chr4:138388869..138388884,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000147728_5end | |description=CAGE_peak_2_at_ENSMUST00000147728_5end | ||
|id=chr4:138388869..138388884,+ | |id=chr4:138388869..138388884,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.65e-30!6;CL:0000677!2.65e-30!6;CL:0000212!2.65e-30!6;CL:0000584!2.65e-30!6;CL:0000075!6.09e-26!7;CL:0002563!4.05e-20!9;CL:0002251!4.05e-20!9;CL:0000473!1.52e-16!3;CL:0000627!1.52e-16!3;CL:0000682!1.52e-16!3;CL:0000066!1.10e-15!25;CL:0002076!6.13e-12!15;CL:0000223!7.40e-09!20 | |ontology_enrichment_celltype=CL:0000239!2.65e-30!6;CL:0000677!2.65e-30!6;CL:0000212!2.65e-30!6;CL:0000584!2.65e-30!6;CL:0000075!6.09e-26!7;CL:0002563!4.05e-20!9;CL:0002251!4.05e-20!9;CL:0000473!1.52e-16!3;CL:0000627!1.52e-16!3;CL:0000682!1.52e-16!3;CL:0000066!1.10e-15!25;CL:0002076!6.13e-12!15;CL:0000223!7.40e-09!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.17e-22,3;CL:0000239,1.23e-11,6;CL:0000677,1.23e-11,6;CL:0000584,1.23e-11,6;CL:0000066,2.56e-10,25;CL:0000075,4.65e-10,7;CL:0000473,5.75e-10,7;CL:0002563,6.04e-08,9;CL:0002251,6.04e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.90e-41!15;UBERON:0001242!1.27e-31!13;UBERON:0000060!1.27e-31!13;UBERON:0001262!1.27e-31!13;UBERON:0004786!1.27e-31!13;UBERON:0004923!5.66e-25!24;UBERON:0003350!4.05e-20!9;UBERON:0004808!4.05e-20!9;UBERON:0001277!4.05e-20!9;UBERON:0000331!2.76e-17!3;UBERON:0002116!2.76e-17!3;UBERON:0001204!2.76e-17!3;UBERON:0001168!2.76e-17!3;UBERON:0000485!2.09e-16!11;UBERON:0001962!2.12e-11!2;UBERON:0001961!2.12e-11!2;UBERON:0001744!2.12e-11!2;UBERON:0000160!6.17e-11!43;UBERON:0002465!6.89e-08!3;UBERON:0005409!1.35e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.45e-31,15;UBERON:0000331,2.00e-23,3;UBERON:0002116,2.00e-23,3;UBERON:0001204,2.00e-23,3;UBERON:0001168,2.00e-23,3;UBERON:0001242,1.77e-20,13;UBERON:0001262,1.77e-20,13;UBERON:0004786,1.77e-20,13;UBERON:0004923,4.12e-19,24;UBERON:0002108,9.59e-18,4;UBERON:0001962,3.12e-15,2;UBERON:0001961,3.12e-15,2;UBERON:0001744,3.12e-15,2;UBERON:0000160,2.28e-11,31;UBERON:0002465,1.77e-10,3;UBERON:0003199,1.74e-08,1;UBERON:0003350,6.04e-08,9;UBERON:0004808,6.04e-08,9;UBERON:0001277,6.04e-08,9;UBERON:0005409,2.48e-07,47 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0.30246421130683,0.500895729946347,4.36486106970913,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,3.21172993494038,2.29692785646008,3.4460959692726,5.60225204983311,14.6318032981408,6.5527833737582,4.6563407237614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96675849995316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,0.30246421130683,0.500895729946347,4.36486106970913,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,3.21172993494038,2.29692785646008,3.4460959692726,5.60225204983311,14.6318032981408,6.5527833737582,4.6563407237614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96675849995316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENSMUST00000147728 | |short_description=p2@ENSMUST00000147728 | ||
}} | }} |
Latest revision as of 01:13, 5 August 2015
Short description: | p2@ENSMUST00000147728 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000147728_5end |
Coexpression cluster: | MCL_coexpression_mm9:499 |
Association with transcript: | -289bp_to_ENSMUST00000147728_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.17e-22 | 3 |
brush border epithelial cell | 1.23e-11 | 6 |
gut absorptive cell | 1.23e-11 | 6 |
enterocyte | 1.23e-11 | 6 |
epithelial cell | 2.56e-10 | 25 |
columnar/cuboidal epithelial cell | 4.65e-10 | 7 |
defensive cell | 5.75e-10 | 7 |
intestinal epithelial cell | 6.04e-08 | 9 |
epithelial cell of alimentary canal | 6.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.45e-31 | 15 |
ileal mucosa | 2.00e-23 | 3 |
ileum | 2.00e-23 | 3 |
mucosa of small intestine | 2.00e-23 | 3 |
wall of small intestine | 2.00e-23 | 3 |
intestinal mucosa | 1.77e-20 | 13 |
wall of intestine | 1.77e-20 | 13 |
gastrointestinal system mucosa | 1.77e-20 | 13 |
organ component layer | 4.12e-19 | 24 |
small intestine | 9.59e-18 | 4 |
gut-associated lymphoid tissue | 3.12e-15 | 2 |
mucosa-associated lymphoid tissue | 3.12e-15 | 2 |
lymphoid tissue | 3.12e-15 | 2 |
intestine | 2.28e-11 | 31 |
lymphoid system | 1.77e-10 | 3 |
egg chamber | 1.74e-08 | 1 |
epithelium of mucosa | 6.04e-08 | 9 |
gastrointestinal system epithelium | 6.04e-08 | 9 |
intestinal epithelium | 6.04e-08 | 9 |
gastrointestinal system | 2.48e-07 | 47 |