FFCP PHASE1:Mm9::chr4:138390835..138390853,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=499 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:138390835..138390853,+ | |||
|description=CAGE_peak_at_chr4:138390835..138390853,+ | |description=CAGE_peak_at_chr4:138390835..138390853,+ | ||
|id=chr4:138390835..138390853,+ | |id=chr4:138390835..138390853,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.60e-25!6;CL:0000677!2.60e-25!6;CL:0000212!2.60e-25!6;CL:0000584!2.60e-25!6;CL:0000075!1.22e-21!7;CL:0002563!9.69e-17!9;CL:0002251!9.69e-17!9;CL:0000473!1.60e-13!3;CL:0000627!1.60e-13!3;CL:0000682!1.60e-13!3;CL:0000066!1.25e-12!25;CL:0002076!7.43e-10!15;CL:0000223!2.90e-07!20 | |ontology_enrichment_celltype=CL:0000239!2.60e-25!6;CL:0000677!2.60e-25!6;CL:0000212!2.60e-25!6;CL:0000584!2.60e-25!6;CL:0000075!1.22e-21!7;CL:0002563!9.69e-17!9;CL:0002251!9.69e-17!9;CL:0000473!1.60e-13!3;CL:0000627!1.60e-13!3;CL:0000682!1.60e-13!3;CL:0000066!1.25e-12!25;CL:0002076!7.43e-10!15;CL:0000223!2.90e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.34e-18,6;CL:0000677,3.34e-18,6;CL:0000584,3.34e-18,6;CL:0000075,1.18e-15,7;CL:0002563,3.03e-12,9;CL:0002251,3.03e-12,9;CL:0000682,6.83e-10,3;CL:0000066,2.02e-09,25;CL:0002076,1.92e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.16e-33!15;UBERON:0001242!4.76e-26!13;UBERON:0000060!4.76e-26!13;UBERON:0001262!4.76e-26!13;UBERON:0004786!4.76e-26!13;UBERON:0004923!2.18e-20!24;UBERON:0003350!9.69e-17!9;UBERON:0004808!9.69e-17!9;UBERON:0001277!9.69e-17!9;UBERON:0000331!2.20e-14!3;UBERON:0002116!2.20e-14!3;UBERON:0001204!2.20e-14!3;UBERON:0001168!2.20e-14!3;UBERON:0000485!1.29e-13!11;UBERON:0000160!1.55e-12!43;UBERON:0001962!8.23e-10!2;UBERON:0001961!8.23e-10!2;UBERON:0001744!8.23e-10!2;UBERON:0005409!1.38e-08!59;UBERON:0002465!8.29e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.19e-36,15;UBERON:0001242,2.68e-25,13;UBERON:0001262,2.68e-25,13;UBERON:0004786,2.68e-25,13;UBERON:0004923,3.33e-22,24;UBERON:0000331,1.11e-21,3;UBERON:0002116,1.11e-21,3;UBERON:0001204,1.11e-21,3;UBERON:0001168,1.11e-21,3;UBERON:0002108,1.98e-16,4;UBERON:0001962,1.68e-14,2;UBERON:0001961,1.68e-14,2;UBERON:0001744,1.68e-14,2;UBERON:0000160,1.69e-13,31;UBERON:0003350,3.03e-12,9;UBERON:0004808,3.03e-12,9;UBERON:0001277,3.03e-12,9;UBERON:0000485,4.55e-10,11;UBERON:0002465,5.56e-10,3;UBERON:0005409,1.16e-08,47;UBERON:0003199,5.62e-08,1 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,1.51232105653415,0.500895729946347,5.87577451691614,16.8201101228778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87967418011649,5.73523202667925,1.14846392823004,0.86152399231815,9.9116767035509,22.6127869153085,6.80481350351813,10.6430645114546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,7.66906643324278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,1.81999695755814,1.51232105653415,0.500895729946347,5.87577451691614,16.8201101228778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87967418011649,5.73523202667925,1.14846392823004,0.86152399231815,9.9116767035509,22.6127869153085,6.80481350351813,10.6430645114546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,7.66906643324278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:138390835..138390853,+ | |short_description=p@chr4:138390835..138390853,+ | ||
}} | }} |
Latest revision as of 01:14, 5 August 2015
Short description: | p@chr4:138390835..138390853, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:138390835..138390853, + |
Coexpression cluster: | MCL_coexpression_mm9:499 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.34e-18 | 6 |
gut absorptive cell | 3.34e-18 | 6 |
enterocyte | 3.34e-18 | 6 |
columnar/cuboidal epithelial cell | 1.18e-15 | 7 |
intestinal epithelial cell | 3.03e-12 | 9 |
epithelial cell of alimentary canal | 3.03e-12 | 9 |
M cell of gut | 6.83e-10 | 3 |
epithelial cell | 2.02e-09 | 25 |
endo-epithelial cell | 1.92e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.19e-36 | 15 |
intestinal mucosa | 2.68e-25 | 13 |
wall of intestine | 2.68e-25 | 13 |
gastrointestinal system mucosa | 2.68e-25 | 13 |
organ component layer | 3.33e-22 | 24 |
ileal mucosa | 1.11e-21 | 3 |
ileum | 1.11e-21 | 3 |
mucosa of small intestine | 1.11e-21 | 3 |
wall of small intestine | 1.11e-21 | 3 |
small intestine | 1.98e-16 | 4 |
gut-associated lymphoid tissue | 1.68e-14 | 2 |
mucosa-associated lymphoid tissue | 1.68e-14 | 2 |
lymphoid tissue | 1.68e-14 | 2 |
intestine | 1.69e-13 | 31 |
epithelium of mucosa | 3.03e-12 | 9 |
gastrointestinal system epithelium | 3.03e-12 | 9 |
intestinal epithelium | 3.03e-12 | 9 |
simple columnar epithelium | 4.55e-10 | 11 |
lymphoid system | 5.56e-10 | 3 |
gastrointestinal system | 1.16e-08 | 47 |
egg chamber | 5.62e-08 | 1 |