FFCP PHASE1:Mm9::chr4:138753652..138753654,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:138753652..138753654,+|id=chr4:138753652..138753654,+|ontology_enrichment_celltype=CL:0002563!5.50e-18!9;CL:0002251!5.50e-18!9;CL:0002250!3.29e-15!3;CL:0000066!1.01e-10!25;CL:0002076!1.32e-10!15;CL:0000223!1.50e-10!20;CL:0000239!4.55e-07!6;CL:0000677!4.55e-07!6;CL:0000212!4.55e-07!6;CL:0000584!4.55e-07!6|ontology_enrichment_celltype_v019_2=CL:0002250,1.18e-44,3;CL:0002563,1.69e-15,9;CL:0002251,1.69e-15,9;CL:0002076,1.32e-09,15;CL:0000223,2.26e-07,20|ontology_enrichment_disease=DOID:0060100!5.99e-07!3;DOID:4045!5.99e-07!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!5.50e-18!9;UBERON:0004808!5.50e-18!9;UBERON:0001277!5.50e-18!9;UBERON:0001242!1.98e-16!13;UBERON:0000060!1.98e-16!13;UBERON:0001262!1.98e-16!13;UBERON:0004786!1.98e-16!13;UBERON:0000485!1.23e-14!11;UBERON:0000344!3.85e-14!15;UBERON:0004923!5.33e-11!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.69e-15,9;UBERON:0004808,1.69e-15,9;UBERON:0001277,1.69e-15,9;UBERON:0000485,7.94e-13,11;UBERON:0001242,5.70e-11,13;UBERON:0001262,5.70e-11,13;UBERON:0004786,5.70e-11,13;UBERON:0000344,1.32e-09,15|phase1_expression=0,0,0,0,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,2.88851619751275,1.66234645358492,3.47087905646027,0.418531630736908,0,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:138753652..138753654,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:138753652..138753654,+ | |||
|description=CAGE_peak_at_chr4:138753652..138753654,+ | |||
|id=chr4:138753652..138753654,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.50e-18!9;CL:0002251!5.50e-18!9;CL:0002250!3.29e-15!3;CL:0000066!1.01e-10!25;CL:0002076!1.32e-10!15;CL:0000223!1.50e-10!20;CL:0000239!4.55e-07!6;CL:0000677!4.55e-07!6;CL:0000212!4.55e-07!6;CL:0000584!4.55e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.18e-44,3;CL:0002563,1.69e-15,9;CL:0002251,1.69e-15,9;CL:0002076,1.32e-09,15;CL:0000223,2.26e-07,20 | |||
|ontology_enrichment_disease=DOID:0060100!5.99e-07!3;DOID:4045!5.99e-07!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!5.50e-18!9;UBERON:0004808!5.50e-18!9;UBERON:0001277!5.50e-18!9;UBERON:0001242!1.98e-16!13;UBERON:0000060!1.98e-16!13;UBERON:0001262!1.98e-16!13;UBERON:0004786!1.98e-16!13;UBERON:0000485!1.23e-14!11;UBERON:0000344!3.85e-14!15;UBERON:0004923!5.33e-11!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.69e-15,9;UBERON:0004808,1.69e-15,9;UBERON:0001277,1.69e-15,9;UBERON:0000485,7.94e-13,11;UBERON:0001242,5.70e-11,13;UBERON:0001262,5.70e-11,13;UBERON:0004786,5.70e-11,13;UBERON:0000344,1.32e-09,15 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,2.88851619751275,1.66234645358492,3.47087905646027,0.418531630736908,0,1.0470474879476,1.17646297606203,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:138753652..138753654,+ | |||
}} |
Latest revision as of 01:24, 5 August 2015
Short description: | p@chr4:138753652..138753654, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:138753652..138753654, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.18e-44 | 3 |
intestinal epithelial cell | 1.69e-15 | 9 |
epithelial cell of alimentary canal | 1.69e-15 | 9 |
endo-epithelial cell | 1.32e-09 | 15 |
endodermal cell | 2.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.69e-15 | 9 |
gastrointestinal system epithelium | 1.69e-15 | 9 |
intestinal epithelium | 1.69e-15 | 9 |
simple columnar epithelium | 7.94e-13 | 11 |
intestinal mucosa | 5.70e-11 | 13 |
wall of intestine | 5.70e-11 | 13 |
gastrointestinal system mucosa | 5.70e-11 | 13 |
mucosa | 1.32e-09 | 15 |