FFCP PHASE1:Mm9::chr11:113612623..113612641,-: Difference between revisions
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{{FFCP|EntrezGene=56699|HGNC=|MCL_coexpression_id=286|UniProt=Q9JM96|association_with_transcript=0bp_to_ENSMUST00000106616_5end|description=CAGE_peak_5_at_Cdc42ep4_5end|id=chr11:113612623..113612641,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,9.43e-10,8;CL:0000333,2.38e-07,10;CL:0000095,2.38e-07,10;CL:0000243,2.38e-07,10;CL:0000123,2.38e-07,10;CL:0000125,2.38e-07,10;CL:0000030,2.38e-07,10;CL:0000339,2.38e-07,10;CL:0000128,2.42e-07,6;CL:0000126,2.42e-07,6;CL:0000127,2.42e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.11e-08!14;UBERON:0000117!1.11e-08!14;UBERON:0000171!1.11e-08!14;UBERON:0000170!1.11e-08!14;UBERON:0005597!1.11e-08!14;UBERON:0000118!1.11e-08!14;UBERON:0005153!1.60e-08!17;UBERON:0005178!1.09e-07!17;UBERON:0005181!1.09e-07!17;UBERON:0002224!1.09e-07!17;UBERON:0000915!1.09e-07!17;UBERON:0008947!1.09e-07!17;UBERON:0003258!1.09e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.18e-12,14;UBERON:0000117,1.18e-12,14;UBERON:0000171,1.18e-12,14;UBERON:0000170,1.18e-12,14;UBERON:0005597,1.18e-12,14;UBERON:0000118,1.18e-12,14;UBERON:0005153,1.45e-11,17;UBERON:0005178,6.77e-11,17;UBERON:0005181,6.77e-11,17;UBERON:0002224,6.77e-11,17;UBERON:0000915,6.77e-11,17;UBERON:0008947,6.77e-11,17;UBERON:0003258,6.77e-11,17;UBERON:0005157,3.75e-09,20|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,0.503637815735669,0.700837921786577,0.129123323441576,0.140788722151667,0,0,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0,0,0.935476191661768,0.198581902401771,0,0.159992422793407,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0,0,0,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0.755380907853464,1.4192770370732,2.0190142737785,21.1245662973971,2.18025156380447,1.5378032791413,1.94429899074283,4.05960622713551,1.43752564364972,0,0,0,3.08711323243136,1.71920063963254,1.54701627683233,1.41621522601718,0.528990979272033,0.633831403506179,5.42151251310611,0.889294796111139,0.449949858640699,0.988866362566974,1.4209602298922,4.49400165777607,8.4528027170742,0.933206510776299,0.540023753326763,0.630974884054146,0.856952953211411,1.32521124570968,0.489963196859816,0.383381884072945,0,0,1.0214987046815,0.921639199537461,0.527545150920775,0.457438218012048,0,1.11673199600552,2.25105044012672,1.06958773443767,0,0.711858403995515,0.559198337475902,0.302904773332736,0.0755715601067855,1.44932244350839,0,1.3599426674155,0.539703191637817,0.649776417447669,0,0.842666520790511,0.170430322578058,0,0.70667914902068,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.506719730950197,1.01104889002957,1.25602267690966,0.776813650941515,1.03909497345377,0.867426633830679,0.304465478312141,1.15307748628029,0.452167921657868,0.705532242814229,2.76466500925286,2.47194967734374,0.144599356919912,0,0.485300549842228,0.220841518460394,0.484875253135222,0,1.75668478206928,1.46612694769419,0.255457055208591,0.11981512450592,0,0.127070227073065,0.449371918214468,0.915001205637253,0.502617408451458,0.347648640384553,1.27857728665165,0.20778804455956,0.973447578406546,1.62942982160506,0.497627882440372,0.505445516867349,0.631325567659422,0.390361328888111,0.919608417733892,0.540186389416048,0.753524089178575,0.612328492361951,0.512454881139399,0.749613796477831,2.32833033665114,1.29340795759705,1.89106080167819,2.11141348996739,2.41115305670332,2.22437799380478,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,0.207125772535502,0,0.180062061461015,0.946978942340841,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0,0.405344047729279,0.438599962275997,0,0.268412837520744,0.841159794256509,0.411618449517138,0.330418782983798,0.264450566663544,0.853153002140936,0.928946687441754,1.03093969057675,0.403367049246685,0,0.380451252225118,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0.58489226135736,1.79763881730844,0,0.398282546508734,0.569003702859245,0.342745537829186,0,0.203651327845314,0.775809948670503,1.1221731182451,0.885311519739602,0.147610147979602,0.470996183524124,0.863780147452604,0.296452627087149,0,0,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.863088412352432,0.648540907100142,0.274561413188081,0,1.11642284300551,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,2.95605104266567,1.70542270593436,0.977789858652155,1.35796068620151,1.17345124144251,3.35012514883632,4.04674189506223,4.48807390072937,2.20689201748667,2.43611158613652,1.59454768657487,2.13022309130459,1.72684981865896,3.7608755231193,0,0,2.45882136509518,0.827810238914197,1.12385412991454,0.468846746368813,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0.283076530788832,0.404810701674894,1.16902343164525,0,0.32132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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56699 | |||
|HGNC= | |||
|MCL_coexpression_id=286 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JM96 | |||
|association_with_transcript=0bp_to_ENSMUST00000106616_5end | |||
|cluster_id=chr11:113612623..113612641,- | |||
|description=CAGE_peak_5_at_Cdc42ep4_5end | |||
|id=chr11:113612623..113612641,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.43e-10,8;CL:0000333,2.38e-07,10;CL:0000095,2.38e-07,10;CL:0000243,2.38e-07,10;CL:0000123,2.38e-07,10;CL:0000125,2.38e-07,10;CL:0000030,2.38e-07,10;CL:0000339,2.38e-07,10;CL:0000128,2.42e-07,6;CL:0000126,2.42e-07,6;CL:0000127,2.42e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.11e-08!14;UBERON:0000117!1.11e-08!14;UBERON:0000171!1.11e-08!14;UBERON:0000170!1.11e-08!14;UBERON:0005597!1.11e-08!14;UBERON:0000118!1.11e-08!14;UBERON:0005153!1.60e-08!17;UBERON:0005178!1.09e-07!17;UBERON:0005181!1.09e-07!17;UBERON:0002224!1.09e-07!17;UBERON:0000915!1.09e-07!17;UBERON:0008947!1.09e-07!17;UBERON:0003258!1.09e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.18e-12,14;UBERON:0000117,1.18e-12,14;UBERON:0000171,1.18e-12,14;UBERON:0000170,1.18e-12,14;UBERON:0005597,1.18e-12,14;UBERON:0000118,1.18e-12,14;UBERON:0005153,1.45e-11,17;UBERON:0005178,6.77e-11,17;UBERON:0005181,6.77e-11,17;UBERON:0002224,6.77e-11,17;UBERON:0000915,6.77e-11,17;UBERON:0008947,6.77e-11,17;UBERON:0003258,6.77e-11,17;UBERON:0005157,3.75e-09,20 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0.90739263392049,0.500895729946347,0.503637815735669,0.700837921786577,0.129123323441576,0.140788722151667,0,0,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0,0,0.935476191661768,0.198581902401771,0,0.159992422793407,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0,0,0,0,0.523523743973798,0,0.683045484958446,0.971020706062307,0.755380907853464,1.4192770370732,2.0190142737785,21.1245662973971,2.18025156380447,1.5378032791413,1.94429899074283,4.05960622713551,1.43752564364972,0,0,0,3.08711323243136,1.71920063963254,1.54701627683233,1.41621522601718,0.528990979272033,0.633831403506179,5.42151251310611,0.889294796111139,0.449949858640699,0.988866362566974,1.4209602298922,4.49400165777607,8.4528027170742,0.933206510776299,0.540023753326763,0.630974884054146,0.856952953211411,1.32521124570968,0.489963196859816,0.383381884072945,0,0,1.0214987046815,0.921639199537461,0.527545150920775,0.457438218012048,0,1.11673199600552,2.25105044012672,1.06958773443767,0,0.711858403995515,0.559198337475902,0.302904773332736,0.0755715601067855,1.44932244350839,0,1.3599426674155,0.539703191637817,0.649776417447669,0,0.842666520790511,0.170430322578058,0,0.70667914902068,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.506719730950197,1.01104889002957,1.25602267690966,0.776813650941515,1.03909497345377,0.867426633830679,0.304465478312141,1.15307748628029,0.452167921657868,0.705532242814229,2.76466500925286,2.47194967734374,0.144599356919912,0,0.485300549842228,0.220841518460394,0.484875253135222,0,1.75668478206928,1.46612694769419,0.255457055208591,0.11981512450592,0,0.127070227073065,0.449371918214468,0.915001205637253,0.502617408451458,0.347648640384553,1.27857728665165,0.20778804455956,0.973447578406546,1.62942982160506,0.497627882440372,0.505445516867349,0.631325567659422,0.390361328888111,0.919608417733892,0.540186389416048,0.753524089178575,0.612328492361951,0.512454881139399,0.749613796477831,2.32833033665114,1.29340795759705,1.89106080167819,2.11141348996739,2.41115305670332,2.22437799380478,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,0.207125772535502,0,0.180062061461015,0.946978942340841,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,0,0.405344047729279,0.438599962275997,0,0.268412837520744,0.841159794256509,0.411618449517138,0.330418782983798,0.264450566663544,0.853153002140936,0.928946687441754,1.03093969057675,0.403367049246685,0,0.380451252225118,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0.58489226135736,1.79763881730844,0,0.398282546508734,0.569003702859245,0.342745537829186,0,0.203651327845314,0.775809948670503,1.1221731182451,0.885311519739602,0.147610147979602,0.470996183524124,0.863780147452604,0.296452627087149,0,0,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.863088412352432,0.648540907100142,0.274561413188081,0,1.11642284300551,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,2.95605104266567,1.70542270593436,0.977789858652155,1.35796068620151,1.17345124144251,3.35012514883632,4.04674189506223,4.48807390072937,2.20689201748667,2.43611158613652,1.59454768657487,2.13022309130459,1.72684981865896,3.7608755231193,0,0,2.45882136509518,0.827810238914197,1.12385412991454,0.468846746368813,0.327869890753351,0.252470927204373,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0.283076530788832,0.404810701674894,1.16902343164525,0,0.321321316421807,0.425820255624806,1.42452482933804,1.62886959353576,1.31976098378028,1.32745138339963,0,0.302323556964751,0,0.590603785761546,0.614870295887855,1.03371317267288,1.45413491791002,0.712994756769443,0.316036757935816,0,2.06271086496374,0,1.08036656418786,0.905510786479282,1.07168517515796,0.709360934569094,1.07021290561242,0.658196082408484,2.43571959291679,0.938686832254841,0.847328283455281,0.441056796109924,0.16488625294148,1.45317984026315,0.603129249281559,0.716234064018819,0.820704498725306,0.291480836629851,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0.915112692826091,0,0,0,0.954670618015114,0.790839983952838,0.609958401380546,0.648032044930808,0.627264888043406,0.655087691238533,0.269728692769641,0.578574190077352,0.26175594198403,0.259229946583586,1.24267862617385,0,0.598066184175915,1.15820943319968,0.972255941720238,1.42075805825504,2.36538575687089,1.05621514781179,0.651021924219751,1.04859344425711,0,0.288030006257865,0,1.41907650703115,0.308132871494482,0.25984164595559,0.895133478337407,0.39736270956253,0.841368146639782,0.590758108698309,0.706765149637033,0.304827226619999,0.604957110821043,0.194915761479505,1.05833025804362,0.350630706544707,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0.750729901804728,0.73260649706906,2.14368379079066,0.501572104035363,0.564751842617067,0,0.5728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| |||
|short_description=p5@Cdc42ep4 | |||
}} |
Revision as of 09:53, 5 August 2015
Short description: | p5@Cdc42ep4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cdc42ep4_5end |
Coexpression cluster: | MCL_coexpression_mm9:286 |
Association with transcript: | 0bp_to_ENSMUST00000106616_5end |
EntrezGene: | 56699 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.43e-10 | 8 |
migratory neural crest cell | 2.38e-07 | 10 |
neuron associated cell | 2.38e-07 | 10 |
glial cell (sensu Vertebrata) | 2.38e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.38e-07 | 10 |
glial cell | 2.38e-07 | 10 |
glioblast | 2.38e-07 | 10 |
glioblast (sensu Vertebrata) | 2.38e-07 | 10 |
oligodendrocyte | 2.42e-07 | 6 |
macroglial cell | 2.42e-07 | 6 |
astrocyte | 2.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung | 1.18e-12 | 14 |
respiratory tube | 1.18e-12 | 14 |
respiration organ | 1.18e-12 | 14 |
pair of lungs | 1.18e-12 | 14 |
lung primordium | 1.18e-12 | 14 |
lung bud | 1.18e-12 | 14 |
epithelial bud | 1.45e-11 | 17 |
thoracic cavity element | 6.77e-11 | 17 |
thoracic segment organ | 6.77e-11 | 17 |
thoracic cavity | 6.77e-11 | 17 |
thoracic segment of trunk | 6.77e-11 | 17 |
respiratory primordium | 6.77e-11 | 17 |
endoderm of foregut | 6.77e-11 | 17 |
epithelial fold | 3.75e-09 | 20 |