FFCP PHASE1:Mm9::chr2:71588140..71588152,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_ENSMUST00000164635,uc008kaz.1_5end | |||
|cluster_id=chr2:71588140..71588152,- | |||
|description=CAGE_peak_1_at_ENSMUST00000164635_5end,CAGE_peak_1_at_uc008kaz.1_5end | |||
|id=chr2:71588140..71588152,- | |||
|ontology_enrichment_celltype=CL:0002250!3.40e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.18e-44,3;CL:0002563,1.45e-26,9;CL:0002251,1.45e-26,9;CL:0002076,3.22e-16,15;CL:0000223,2.57e-12,20;CL:0000066,5.78e-10,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.01e-12!15;UBERON:0001242!5.29e-08!13;UBERON:0000060!5.29e-08!13;UBERON:0001262!5.29e-08!13;UBERON:0004786!5.29e-08!13;UBERON:0001962!5.14e-07!2;UBERON:0001961!5.14e-07!2;UBERON:0001744!5.14e-07!2;UBERON:0004923!6.18e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.45e-26,9;UBERON:0004808,1.45e-26,9;UBERON:0001277,1.45e-26,9;UBERON:0000344,1.01e-24,15;UBERON:0000485,7.21e-22,11;UBERON:0001242,1.30e-18,13;UBERON:0001262,1.30e-18,13;UBERON:0004786,1.30e-18,13;UBERON:0004923,1.15e-15,24;UBERON:0000160,3.24e-12,31;UBERON:0001962,1.81e-08,2;UBERON:0001961,1.81e-08,2;UBERON:0001744,1.81e-08,2;UBERON:0005409,3.41e-08,47 | |||
|phase1_expression=0,0,0,0,0,2.18243053485457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,0.45881856213434,0,0.86152399231815,0.861884930743556,0.380046838912748,0,0.665191531965914,0,0,0,3.75507105676657,2.82598897109437,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,2.18243053485457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,0.45881856213434,0,0.86152399231815,0.861884930743556,0.380046838912748,0,0.665191531965914,0,0,0,3.75507105676657,2.82598897109437,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05780226665418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000164635,p1@uc008kaz.1 | |||
}} | }} |
Latest revision as of 10:15, 5 August 2015
Short description: | p1@ENSMUST00000164635, p1@uc008kaz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000164635_5end, CAGE_peak_1_at_uc008kaz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | 66bp_to_ENSMUST00000164635, uc008kaz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.18e-44 | 3 |
intestinal epithelial cell | 1.45e-26 | 9 |
epithelial cell of alimentary canal | 1.45e-26 | 9 |
endo-epithelial cell | 3.22e-16 | 15 |
endodermal cell | 2.57e-12 | 20 |
epithelial cell | 5.78e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.45e-26 | 9 |
gastrointestinal system epithelium | 1.45e-26 | 9 |
intestinal epithelium | 1.45e-26 | 9 |
mucosa | 1.01e-24 | 15 |
simple columnar epithelium | 7.21e-22 | 11 |
intestinal mucosa | 1.30e-18 | 13 |
wall of intestine | 1.30e-18 | 13 |
gastrointestinal system mucosa | 1.30e-18 | 13 |
organ component layer | 1.15e-15 | 24 |
intestine | 3.24e-12 | 31 |
gut-associated lymphoid tissue | 1.81e-08 | 2 |
mucosa-associated lymphoid tissue | 1.81e-08 | 2 |
lymphoid tissue | 1.81e-08 | 2 |
gastrointestinal system | 3.41e-08 | 47 |