FFCP PHASE1:Mm9::chr1:21290067..21290086,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:21290067..21290086,- to FFCP PHASE1:Mm9::chr1:21290067..21290086,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:21290067..21290086,- | |||
|description=CAGE_peak_at_chr1:21290067..21290086,- | |||
|id=chr1:21290067..21290086,- | |||
|ontology_enrichment_celltype=CL:0000181!8.67e-18!5;CL:0000417!8.67e-18!5;CL:0000668!8.67e-18!5;CL:0000412!8.67e-18!5;CL:0000182!8.67e-18!5;CL:0000414!3.50e-08!11;CL:0000057!6.50e-07!1;CL:0000632!6.50e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.69e-32,5;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0000223,1.15e-08,20;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3;CL:0000066,4.44e-07,25;CL:0002320,9.87e-07,46;CL:0000134,9.87e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.02e-11!22;UBERON:0007499!2.02e-11!22;UBERON:0006925!2.02e-11!22;UBERON:0009497!2.02e-11!22;UBERON:0000015!2.02e-11!22;UBERON:0002423!2.02e-11!22;UBERON:0006235!2.02e-11!22;UBERON:0008835!2.02e-11!22;UBERON:0003894!2.02e-11!22;UBERON:0004161!2.02e-11!22;UBERON:0008836!2.02e-11!22;UBERON:0009854!6.79e-11!23;UBERON:0009856!6.79e-11!23;UBERON:0002365!5.75e-10!25;UBERON:0002330!5.75e-10!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.10e-13,22;UBERON:0007499,2.10e-13,22;UBERON:0006925,2.10e-13,22;UBERON:0009497,2.10e-13,22;UBERON:0000015,2.10e-13,22;UBERON:0002423,2.10e-13,22;UBERON:0006235,2.10e-13,22;UBERON:0008835,2.10e-13,22;UBERON:0003894,2.10e-13,22;UBERON:0004161,2.10e-13,22;UBERON:0008836,2.10e-13,22;UBERON:0009854,7.48e-13,23;UBERON:0009856,7.48e-13,23;UBERON:0002365,7.02e-12,25;UBERON:0002330,7.02e-12,25;UBERON:0005256,7.19e-07,45;UBERON:0002384,9.87e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,43.8816177260507,0,3.2382191498269,56.5305483179472,32.2579358710082,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,43.8816177260507,0,3.2382191498269,56.5305483179472,32.2579358710082,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:21290067..21290086,- | |||
}} | }} |
Latest revision as of 13:15, 5 August 2015
Short description: | p@chr1:21290067..21290086, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:21290067..21290086, - |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.69e-32 | 5 |
fibroblast | 7.74e-19 | 1 |
hepatic stellate cell | 7.74e-19 | 1 |
endodermal cell | 1.15e-08 | 20 |
secretory cell | 3.64e-07 | 3 |
stromal cell | 3.64e-07 | 3 |
extracellular matrix secreting cell | 3.64e-07 | 3 |
epithelial cell | 4.44e-07 | 25 |
connective tissue cell | 9.87e-07 | 46 |
mesenchymal cell | 9.87e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
liver | 2.10e-13 | 22 |
epithelial sac | 2.10e-13 | 22 |
digestive gland | 2.10e-13 | 22 |
epithelium of foregut-midgut junction | 2.10e-13 | 22 |
anatomical boundary | 2.10e-13 | 22 |
hepatobiliary system | 2.10e-13 | 22 |
foregut-midgut junction | 2.10e-13 | 22 |
hepatic diverticulum | 2.10e-13 | 22 |
liver primordium | 2.10e-13 | 22 |
septum transversum | 2.10e-13 | 22 |
liver bud | 2.10e-13 | 22 |
digestive tract diverticulum | 7.48e-13 | 23 |
sac | 7.48e-13 | 23 |
exocrine gland | 7.02e-12 | 25 |
exocrine system | 7.02e-12 | 25 |
trunk mesenchyme | 7.19e-07 | 45 |
connective tissue | 9.87e-07 | 46 |