FFCP PHASE1:Mm9::chr4:49557784..49557797,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=211 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:49557784..49557797,- | |||
|description=CAGE_peak_at_chr4:49557784..49557797,- | |description=CAGE_peak_at_chr4:49557784..49557797,- | ||
|id=chr4:49557784..49557797,- | |id=chr4:49557784..49557797,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.64e-09,25;CL:0000182,2.26e-08,5;CL:0000682,4.32e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.21e-16!22;UBERON:0007499!3.21e-16!22;UBERON:0006925!3.21e-16!22;UBERON:0009497!3.21e-16!22;UBERON:0000015!3.21e-16!22;UBERON:0002423!3.21e-16!22;UBERON:0006235!3.21e-16!22;UBERON:0008835!3.21e-16!22;UBERON:0003894!3.21e-16!22;UBERON:0004161!3.21e-16!22;UBERON:0008836!3.21e-16!22;UBERON:0009854!3.23e-15!23;UBERON:0009856!3.23e-15!23;UBERON:0002365!1.84e-13!25;UBERON:0002330!1.84e-13!25;UBERON:0005172!7.55e-13!49;UBERON:0005173!7.55e-13!49;UBERON:0002417!7.55e-13!49;UBERON:0000916!7.55e-13!49;UBERON:0000160!2.61e-09!43;UBERON:0001007!2.34e-08!128;UBERON:0001555!2.34e-08!128;UBERON:0007026!2.34e-08!128;UBERON:0004119!5.13e-08!130;UBERON:0000925!5.13e-08!130;UBERON:0006595!5.13e-08!130;UBERON:0000344!5.88e-08!15;UBERON:0009569!8.81e-08!66;UBERON:0004921!1.94e-07!126;UBERON:0004185!1.94e-07!126;UBERON:0003929!2.01e-07!55;UBERON:0005256!2.20e-07!47 | |ontology_enrichment_uberon=UBERON:0002107!3.21e-16!22;UBERON:0007499!3.21e-16!22;UBERON:0006925!3.21e-16!22;UBERON:0009497!3.21e-16!22;UBERON:0000015!3.21e-16!22;UBERON:0002423!3.21e-16!22;UBERON:0006235!3.21e-16!22;UBERON:0008835!3.21e-16!22;UBERON:0003894!3.21e-16!22;UBERON:0004161!3.21e-16!22;UBERON:0008836!3.21e-16!22;UBERON:0009854!3.23e-15!23;UBERON:0009856!3.23e-15!23;UBERON:0002365!1.84e-13!25;UBERON:0002330!1.84e-13!25;UBERON:0005172!7.55e-13!49;UBERON:0005173!7.55e-13!49;UBERON:0002417!7.55e-13!49;UBERON:0000916!7.55e-13!49;UBERON:0000160!2.61e-09!43;UBERON:0001007!2.34e-08!128;UBERON:0001555!2.34e-08!128;UBERON:0007026!2.34e-08!128;UBERON:0004119!5.13e-08!130;UBERON:0000925!5.13e-08!130;UBERON:0006595!5.13e-08!130;UBERON:0000344!5.88e-08!15;UBERON:0009569!8.81e-08!66;UBERON:0004921!1.94e-07!126;UBERON:0004185!1.94e-07!126;UBERON:0003929!2.01e-07!55;UBERON:0005256!2.20e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.60e-22,22;UBERON:0007499,1.60e-22,22;UBERON:0006925,1.60e-22,22;UBERON:0009497,1.60e-22,22;UBERON:0000015,1.60e-22,22;UBERON:0002423,1.60e-22,22;UBERON:0006235,1.60e-22,22;UBERON:0008835,1.60e-22,22;UBERON:0003894,1.60e-22,22;UBERON:0004161,1.60e-22,22;UBERON:0008836,1.60e-22,22;UBERON:0009854,2.21e-21,23;UBERON:0009856,2.21e-21,23;UBERON:0002365,2.24e-19,25;UBERON:0002330,2.24e-19,25;UBERON:0001007,3.41e-13,116;UBERON:0001555,3.41e-13,116;UBERON:0007026,3.41e-13,116;UBERON:0004119,7.48e-13,118;UBERON:0000925,7.48e-13,118;UBERON:0006595,7.48e-13,118;UBERON:0005172,2.91e-12,49;UBERON:0005173,2.91e-12,49;UBERON:0002417,2.91e-12,49;UBERON:0000916,2.91e-12,49;UBERON:0003929,9.19e-12,55;UBERON:0000160,1.55e-11,31;UBERON:0004921,1.91e-11,114;UBERON:0005256,3.57e-09,45;UBERON:0000490,4.67e-09,66;UBERON:0003104,5.18e-09,61;UBERON:0009142,5.18e-09,61;UBERON:0003914,1.23e-08,47;UBERON:0005911,1.80e-08,69;UBERON:0009569,5.15e-08,66 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,5.44435580352294,2.50447864973174,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,1.11994695955385,1.37645568640302,2.8711598205751,1.7230479846363,1.29282739611533,0.950117097281869,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,2.03991400112325,14.5719861742211,11.695975514058,4.03224198387602,1.68533304158102,0,0,0,0,0,0,0,0,0,0,5.48082622651488,0,0,0.173485326766136,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,1.02182822083437,0,0,0,0,0.457500602818626,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,7.26921322564356,4.23120906661671,0,0,0,0.403367049246685,0.444756087689741,0.190225626112559,4.2707615539006,0.658795818896044,1.00534083520108,2.18852119245266,0.58489226135736,2.69645822596266,1.94524244887225,3.78368419183298,0,0,0,0.407302655690628,0.775809948670503,0.561086559122548,0.379419222745544,2.80459281161244,2.66897837330337,3.70191491765402,5.33614728756868,0.166845105716094,0,0,0.202860121388503,0.72353147925725,0.50925170356284,2.30156909960649,5.83686816390127,4.11842119782122,23.0029130443767,5.20997326735905,1.24815069245824,3.78868316920668,3.76734568396016,5.78932225636041,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0,0.593175090620871,0,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,1.36499771816861,5.44435580352294,2.50447864973174,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,1.11994695955385,1.37645568640302,2.8711598205751,1.7230479846363,1.29282739611533,0.950117097281869,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,2.03991400112325,14.5719861742211,11.695975514058,4.03224198387602,1.68533304158102,0,0,0,0,0,0,0,0,0,0,5.48082622651488,0,0,0.173485326766136,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,1.02182822083437,0,0,0,0,0.457500602818626,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,7.26921322564356,4.23120906661671,0,0,0,0.403367049246685,0.444756087689741,0.190225626112559,4.2707615539006,0.658795818896044,1.00534083520108,2.18852119245266,0.58489226135736,2.69645822596266,1.94524244887225,3.78368419183298,0,0,0,0.407302655690628,0.775809948670503,0.561086559122548,0.379419222745544,2.80459281161244,2.66897837330337,3.70191491765402,5.33614728756868,0.166845105716094,0,0,0.202860121388503,0.72353147925725,0.50925170356284,2.30156909960649,5.83686816390127,4.11842119782122,23.0029130443767,5.20997326735905,1.24815069245824,3.78868316920668,3.76734568396016,5.78932225636041,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,0,0.593175090620871,0,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr4:49557784..49557797,- | |short_description=p@chr4:49557784..49557797,- | ||
}} | }} |
Latest revision as of 14:03, 5 August 2015
Short description: | p@chr4:49557784..49557797, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:49557784..49557797, - |
Coexpression cluster: | MCL_coexpression_mm9:211 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.64e-09 | 25 |
hepatocyte | 2.26e-08 | 5 |
M cell of gut | 4.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.60e-22 | 22 |
epithelial sac | 1.60e-22 | 22 |
digestive gland | 1.60e-22 | 22 |
epithelium of foregut-midgut junction | 1.60e-22 | 22 |
anatomical boundary | 1.60e-22 | 22 |
hepatobiliary system | 1.60e-22 | 22 |
foregut-midgut junction | 1.60e-22 | 22 |
hepatic diverticulum | 1.60e-22 | 22 |
liver primordium | 1.60e-22 | 22 |
septum transversum | 1.60e-22 | 22 |
liver bud | 1.60e-22 | 22 |
digestive tract diverticulum | 2.21e-21 | 23 |
sac | 2.21e-21 | 23 |
exocrine gland | 2.24e-19 | 25 |
exocrine system | 2.24e-19 | 25 |
digestive system | 3.41e-13 | 116 |
digestive tract | 3.41e-13 | 116 |
primitive gut | 3.41e-13 | 116 |
endoderm-derived structure | 7.48e-13 | 118 |
endoderm | 7.48e-13 | 118 |
presumptive endoderm | 7.48e-13 | 118 |
abdomen element | 2.91e-12 | 49 |
abdominal segment element | 2.91e-12 | 49 |
abdominal segment of trunk | 2.91e-12 | 49 |
abdomen | 2.91e-12 | 49 |
gut epithelium | 9.19e-12 | 55 |
intestine | 1.55e-11 | 31 |
subdivision of digestive tract | 1.91e-11 | 114 |
trunk mesenchyme | 3.57e-09 | 45 |
unilaminar epithelium | 4.67e-09 | 66 |
mesenchyme | 5.18e-09 | 61 |
entire embryonic mesenchyme | 5.18e-09 | 61 |
epithelial tube | 1.23e-08 | 47 |
endo-epithelium | 1.80e-08 | 69 |
subdivision of trunk | 5.15e-08 | 66 |