FFCP PHASE1:Mm9::chr8:102187819..102187863,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=550 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_ENSMUST00000118240_5end | |association_with_transcript=-55bp_to_ENSMUST00000118240_5end | ||
|cluster_id=chr8:102187819..102187863,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000118240_5end | |description=CAGE_peak_1_at_ENSMUST00000118240_5end | ||
|id=chr8:102187819..102187863,+ | |id=chr8:102187819..102187863,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.29e-11!6;CL:0000677!2.29e-11!6;CL:0000212!2.29e-11!6;CL:0000584!2.29e-11!6;CL:0000075!9.39e-10!7;CL:0002563!1.35e-07!9;CL:0002251!1.35e-07!9 | |ontology_enrichment_celltype=CL:0000239!2.29e-11!6;CL:0000677!2.29e-11!6;CL:0000212!2.29e-11!6;CL:0000584!2.29e-11!6;CL:0000075!9.39e-10!7;CL:0002563!1.35e-07!9;CL:0002251!1.35e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.83e-19,6;CL:0000677,1.83e-19,6;CL:0000584,1.83e-19,6;CL:0000075,8.43e-17,7;CL:0002563,3.07e-13,9;CL:0002251,3.07e-13,9;CL:0002076,3.23e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.90e-26!15;UBERON:0000160!9.94e-21!43;UBERON:0001242!6.75e-19!13;UBERON:0000060!6.75e-19!13;UBERON:0001262!6.75e-19!13;UBERON:0004786!6.75e-19!13;UBERON:0005409!2.84e-16!59;UBERON:0004923!1.84e-15!24;UBERON:0000331!1.48e-12!3;UBERON:0002116!1.48e-12!3;UBERON:0001204!1.48e-12!3;UBERON:0001168!1.48e-12!3;UBERON:0001962!1.51e-09!2;UBERON:0001961!1.51e-09!2;UBERON:0001744!1.51e-09!2;UBERON:0001007!6.63e-08!128;UBERON:0001555!6.63e-08!128;UBERON:0007026!6.63e-08!128;UBERON:0004119!9.91e-08!130;UBERON:0000925!9.91e-08!130;UBERON:0006595!9.91e-08!130;UBERON:0003350!1.35e-07!9;UBERON:0004808!1.35e-07!9;UBERON:0001277!1.35e-07!9 | |ontology_enrichment_uberon=UBERON:0000344!9.90e-26!15;UBERON:0000160!9.94e-21!43;UBERON:0001242!6.75e-19!13;UBERON:0000060!6.75e-19!13;UBERON:0001262!6.75e-19!13;UBERON:0004786!6.75e-19!13;UBERON:0005409!2.84e-16!59;UBERON:0004923!1.84e-15!24;UBERON:0000331!1.48e-12!3;UBERON:0002116!1.48e-12!3;UBERON:0001204!1.48e-12!3;UBERON:0001168!1.48e-12!3;UBERON:0001962!1.51e-09!2;UBERON:0001961!1.51e-09!2;UBERON:0001744!1.51e-09!2;UBERON:0001007!6.63e-08!128;UBERON:0001555!6.63e-08!128;UBERON:0007026!6.63e-08!128;UBERON:0004119!9.91e-08!130;UBERON:0000925!9.91e-08!130;UBERON:0006595!9.91e-08!130;UBERON:0003350!1.35e-07!9;UBERON:0004808!1.35e-07!9;UBERON:0001277!1.35e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.03e-40,15;UBERON:0001962,3.19e-26,2;UBERON:0001961,3.19e-26,2;UBERON:0001744,3.19e-26,2;UBERON:0004923,1.32e-25,24;UBERON:0001242,4.04e-24,13;UBERON:0001262,4.04e-24,13;UBERON:0004786,4.04e-24,13;UBERON:0002465,7.36e-18,3;UBERON:0000331,2.82e-17,3;UBERON:0002116,2.82e-17,3;UBERON:0001204,2.82e-17,3;UBERON:0001168,2.82e-17,3;UBERON:0003199,8.69e-14,1;UBERON:0003350,3.07e-13,9;UBERON:0004808,3.07e-13,9;UBERON:0001277,3.07e-13,9;UBERON:0002108,3.18e-13,4;UBERON:0000485,5.80e-11,11;UBERON:0000160,2.45e-10,31;UBERON:0005409,6.69e-07,47 | |||
|phase1_expression=0,0.697950815278722,0,15.4256747766483,15.5277676283368,0,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4391740844813,8.48814339948529,0,0.430761996159075,0.430942465371778,5.13063232532209,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0.22237804384487,0.760902504450237,0,0.494096864172033,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,0,15.4256747766483,15.5277676283368,0,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4391740844813,8.48814339948529,0,0.430761996159075,0.430942465371778,5.13063232532209,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0,0,0.22237804384487,0.760902504450237,0,0.494096864172033,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000118240 | |short_description=p1@ENSMUST00000118240 | ||
}} | }} |
Latest revision as of 18:54, 5 August 2015
Short description: | p1@ENSMUST00000118240 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000118240_5end |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | -55bp_to_ENSMUST00000118240_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.83e-19 | 6 |
gut absorptive cell | 1.83e-19 | 6 |
enterocyte | 1.83e-19 | 6 |
columnar/cuboidal epithelial cell | 8.43e-17 | 7 |
intestinal epithelial cell | 3.07e-13 | 9 |
epithelial cell of alimentary canal | 3.07e-13 | 9 |
endo-epithelial cell | 3.23e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.03e-40 | 15 |
gut-associated lymphoid tissue | 3.19e-26 | 2 |
mucosa-associated lymphoid tissue | 3.19e-26 | 2 |
lymphoid tissue | 3.19e-26 | 2 |
organ component layer | 1.32e-25 | 24 |
intestinal mucosa | 4.04e-24 | 13 |
wall of intestine | 4.04e-24 | 13 |
gastrointestinal system mucosa | 4.04e-24 | 13 |
lymphoid system | 7.36e-18 | 3 |
ileal mucosa | 2.82e-17 | 3 |
ileum | 2.82e-17 | 3 |
mucosa of small intestine | 2.82e-17 | 3 |
wall of small intestine | 2.82e-17 | 3 |
egg chamber | 8.69e-14 | 1 |
epithelium of mucosa | 3.07e-13 | 9 |
gastrointestinal system epithelium | 3.07e-13 | 9 |
intestinal epithelium | 3.07e-13 | 9 |
small intestine | 3.18e-13 | 4 |
simple columnar epithelium | 5.80e-11 | 11 |
intestine | 2.45e-10 | 31 |
gastrointestinal system | 6.69e-07 | 47 |