FFCP PHASE1:Mm9::chr13:44216663..44216691,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000159595_5end | |association_with_transcript=0bp_to_ENSMUST00000159595_5end | ||
|cluster_id=chr13:44216663..44216691,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000159595_5end | |description=CAGE_peak_1_at_ENSMUST00000159595_5end | ||
|id=chr13:44216663..44216691,+ | |id=chr13:44216663..44216691,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!9.81e-19!49;UBERON:0000033!3.97e-17!63;UBERON:0002346!1.12e-16!71;UBERON:0003075!1.12e-16!71;UBERON:0007284!1.12e-16!71;UBERON:0001049!7.95e-15!52;UBERON:0005068!7.95e-15!52;UBERON:0006241!7.95e-15!52;UBERON:0007135!7.95e-15!52;UBERON:0002616!8.08e-15!49;UBERON:0002780!9.23e-15!39;UBERON:0001890!9.23e-15!39;UBERON:0006240!9.23e-15!39;UBERON:0000955!2.18e-14!50;UBERON:0006238!2.18e-14!50;UBERON:0003080!3.03e-14!40;UBERON:0001017!8.49e-13!73;UBERON:0005743!8.49e-13!73;UBERON:0000073!3.02e-12!75;UBERON:0001016!3.02e-12!75;UBERON:0004121!7.98e-12!102;UBERON:0000924!7.98e-12!102;UBERON:0006601!7.98e-12!102;UBERON:0000153!9.40e-12!94;UBERON:0007811!2.20e-10!86;UBERON:0001894!7.79e-10!10;UBERON:0006222!7.79e-10!10;UBERON:0000007!1.47e-09!8;UBERON:0003296!1.47e-09!8;UBERON:0010133!1.47e-09!8;UBERON:0002791!1.53e-07!29;UBERON:0003528!1.53e-07!29;UBERON:0001893!1.53e-07!29;UBERON:0002020!6.25e-07!34 | |ontology_enrichment_uberon=UBERON:0003056!9.81e-19!49;UBERON:0000033!3.97e-17!63;UBERON:0002346!1.12e-16!71;UBERON:0003075!1.12e-16!71;UBERON:0007284!1.12e-16!71;UBERON:0001049!7.95e-15!52;UBERON:0005068!7.95e-15!52;UBERON:0006241!7.95e-15!52;UBERON:0007135!7.95e-15!52;UBERON:0002616!8.08e-15!49;UBERON:0002780!9.23e-15!39;UBERON:0001890!9.23e-15!39;UBERON:0006240!9.23e-15!39;UBERON:0000955!2.18e-14!50;UBERON:0006238!2.18e-14!50;UBERON:0003080!3.03e-14!40;UBERON:0001017!8.49e-13!73;UBERON:0005743!8.49e-13!73;UBERON:0000073!3.02e-12!75;UBERON:0001016!3.02e-12!75;UBERON:0004121!7.98e-12!102;UBERON:0000924!7.98e-12!102;UBERON:0006601!7.98e-12!102;UBERON:0000153!9.40e-12!94;UBERON:0007811!2.20e-10!86;UBERON:0001894!7.79e-10!10;UBERON:0006222!7.79e-10!10;UBERON:0000007!1.47e-09!8;UBERON:0003296!1.47e-09!8;UBERON:0010133!1.47e-09!8;UBERON:0002791!1.53e-07!29;UBERON:0003528!1.53e-07!29;UBERON:0001893!1.53e-07!29;UBERON:0002020!6.25e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002021,1.14e-09,10;UBERON:0000411,1.14e-09,10;UBERON:0001950,1.14e-09,10;UBERON:0002616,2.15e-08,46;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0.383381884072945,0,0,0,0,0.527545150920775,0.274462930807229,0,0.837548997004143,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4719293400046,20.5257772677186,0,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0.486723789203273,0,0,0,0.210441855886474,0.260240885925407,0,0,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.431135985865684,0,0.703804496655795,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,1.37016503954128,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0.383381884072945,0,0,0,0,0.527545150920775,0.274462930807229,0,0.837548997004143,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4719293400046,20.5257772677186,0,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0.486723789203273,0,0,0,0.210441855886474,0.260240885925407,0,0,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.431135985865684,0,0.703804496655795,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,1.37016503954128,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | ||
|short_description=p1@ENSMUST00000159595 | |short_description=p1@ENSMUST00000159595 | ||
}} | }} |
Latest revision as of 00:33, 6 August 2015
Short description: | p1@ENSMUST00000159595 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000159595_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000159595_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.55e-23 | 4 |
regional part of metencephalon | 6.55e-23 | 4 |
metencephalon | 6.55e-23 | 4 |
future metencephalon | 6.55e-23 | 4 |
rhombic lip | 6.55e-23 | 4 |
segmental subdivision of hindbrain | 1.13e-15 | 6 |
segmental subdivision of nervous system | 1.13e-15 | 6 |
hindbrain | 1.13e-15 | 6 |
presumptive hindbrain | 1.13e-15 | 6 |
occipital lobe | 1.14e-09 | 10 |
visual cortex | 1.14e-09 | 10 |
neocortex | 1.14e-09 | 10 |
regional part of brain | 2.15e-08 | 46 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |