FFCP PHASE1:Mm9::chr6:68424573..68424579,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=419 | |MCL_coexpression_id=419 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:68424573..68424579,+ | |||
|description=CAGE_peak_at_chr6:68424573..68424579,+ | |description=CAGE_peak_at_chr6:68424573..68424579,+ | ||
|id=chr6:68424573..68424579,+ | |id=chr6:68424573..68424579,+ | ||
|ontology_enrichment_celltype=CL:0000553!2.32e-09!6;CL:0000556!2.32e-09!6 | |ontology_enrichment_celltype=CL:0000553!2.32e-09!6;CL:0000556!2.32e-09!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.01e-13,6;CL:0000556,1.01e-13,6;CL:0000945,4.59e-10,1;CL:0000236,4.59e-10,1;CL:0000826,4.59e-10,1;CL:0000050,2.33e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.43e-12!48;UBERON:0002465!3.58e-11!3;UBERON:0002106!4.82e-09!6;UBERON:0004457!4.82e-09!6;UBERON:0000042!4.82e-09!6;UBERON:0004854!4.82e-09!6;UBERON:0009034!4.82e-09!6;UBERON:0002095!4.82e-09!6;UBERON:0004782!4.82e-09!6;UBERON:0003281!4.82e-09!6;UBERON:0009664!4.82e-09!6;UBERON:0002296!4.82e-09!6;UBERON:0005602!4.82e-09!6;UBERON:0001179!4.82e-09!6;UBERON:0006293!4.82e-09!6;UBERON:0002405!7.23e-09!70;UBERON:0002390!3.37e-08!45;UBERON:0003061!3.37e-08!45;UBERON:0001962!4.30e-08!2;UBERON:0001961!4.30e-08!2;UBERON:0001744!4.30e-08!2;UBERON:0003887!6.42e-08!10;UBERON:0002371!4.26e-07!16;UBERON:0001474!9.90e-07!22;UBERON:0004765!9.90e-07!22;UBERON:0001434!9.90e-07!22 | |ontology_enrichment_uberon=UBERON:0002193!1.43e-12!48;UBERON:0002465!3.58e-11!3;UBERON:0002106!4.82e-09!6;UBERON:0004457!4.82e-09!6;UBERON:0000042!4.82e-09!6;UBERON:0004854!4.82e-09!6;UBERON:0009034!4.82e-09!6;UBERON:0002095!4.82e-09!6;UBERON:0004782!4.82e-09!6;UBERON:0003281!4.82e-09!6;UBERON:0009664!4.82e-09!6;UBERON:0002296!4.82e-09!6;UBERON:0005602!4.82e-09!6;UBERON:0001179!4.82e-09!6;UBERON:0006293!4.82e-09!6;UBERON:0002405!7.23e-09!70;UBERON:0002390!3.37e-08!45;UBERON:0003061!3.37e-08!45;UBERON:0001962!4.30e-08!2;UBERON:0001961!4.30e-08!2;UBERON:0001744!4.30e-08!2;UBERON:0003887!6.42e-08!10;UBERON:0002371!4.26e-07!16;UBERON:0001474!9.90e-07!22;UBERON:0004765!9.90e-07!22;UBERON:0001434!9.90e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.55e-27,3;UBERON:0001962,1.06e-18,2;UBERON:0001961,1.06e-18,2;UBERON:0001744,1.06e-18,2;UBERON:0003199,1.63e-10,1;UBERON:0000029,8.42e-10,1;UBERON:0001097,8.42e-10,1;UBERON:0003968,8.42e-10,1;UBERON:0001467,8.42e-10,1;UBERON:0002193,1.11e-08,48;UBERON:0002405,1.11e-08,48;UBERON:0002204,5.75e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,1.41957974411207,3.83920414096069,1.69755860719212,0,0,0,1.59992422793407,5.04700418347774,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,3.34825304589526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73393409276564,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,1.41957974411207,3.83920414096069,1.69755860719212,0,0,0,1.59992422793407,5.04700418347774,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,3.34825304589526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73393409276564,0,0,0.376736914009382,0.27338845544205,0.457556346413045,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:68424573..68424579,+ | |short_description=p@chr6:68424573..68424579,+ | ||
}} | }} |
Latest revision as of 01:23, 6 August 2015
Short description: | p@chr6:68424573..68424579, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:68424573..68424579, + |
Coexpression cluster: | MCL_coexpression_mm9:419 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.01e-13 | 6 |
megakaryocyte | 1.01e-13 | 6 |
lymphocyte of B lineage | 4.59e-10 | 1 |
B cell | 4.59e-10 | 1 |
pro-B cell | 4.59e-10 | 1 |
megakaryocyte-erythroid progenitor cell | 2.33e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 8.55e-27 | 3 |
gut-associated lymphoid tissue | 1.06e-18 | 2 |
mucosa-associated lymphoid tissue | 1.06e-18 | 2 |
lymphoid tissue | 1.06e-18 | 2 |
egg chamber | 1.63e-10 | 1 |
lymph node | 8.42e-10 | 1 |
axillary lymph node | 8.42e-10 | 1 |
peripheral lymph node | 8.42e-10 | 1 |
shoulder | 8.42e-10 | 1 |
hemolymphoid system | 1.11e-08 | 48 |
immune system | 1.11e-08 | 48 |
musculoskeletal system | 5.75e-07 | 32 |