FFCP PHASE1:Mm9::chr6:78321183..78321200,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=448 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:78321183..78321200,+ | |||
|description=CAGE_peak_at_chr6:78321183..78321200,+ | |description=CAGE_peak_at_chr6:78321183..78321200,+ | ||
|id=chr6:78321183..78321200,+ | |id=chr6:78321183..78321200,+ | ||
|ontology_enrichment_celltype=CL:0000239!8.40e-17!6;CL:0000677!8.40e-17!6;CL:0000212!8.40e-17!6;CL:0000584!8.40e-17!6;CL:0002563!2.23e-14!9;CL:0002251!2.23e-14!9;CL:0000075!2.66e-14!7;CL:0000473!1.10e-09!3;CL:0000627!1.10e-09!3;CL:0000682!1.10e-09!3;CL:0000066!1.49e-09!25;CL:0002076!3.24e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.15e-25,6;CL:0000677,3.15e-25,6;CL:0000584,3.15e-25,6;CL:0000075,1.43e-21,7;CL:0002563,1.10e-16,9;CL:0002251,1.10e-16,9;CL:0000682,3.64e-14,3;CL:0000066,8.08e-13,25;CL:0002076,8.00e-10,15;CL:0000223,3.06e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.57e-29!15;UBERON:0001242!1.16e-24!13;UBERON:0000060!1.16e-24!13;UBERON:0001262!1.16e-24!13;UBERON:0004786!1.16e-24!13;UBERON:0000160!8.79e-24!43;UBERON:0004923!2.31e-17!24;UBERON:0005409!4.83e-16!59;UBERON:0003350!2.23e-14!9;UBERON:0004808!2.23e-14!9;UBERON:0001277!2.23e-14!9;UBERON:0000485!1.41e-11!11;UBERON:0000331!6.12e-10!3;UBERON:0002116!6.12e-10!3;UBERON:0001204!6.12e-10!3;UBERON:0001168!6.12e-10!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.19e-39,15;UBERON:0001242,5.59e-32,13;UBERON:0001262,5.59e-32,13;UBERON:0004786,5.59e-32,13;UBERON:0000160,9.09e-25,31;UBERON:0004923,6.62e-24,24;UBERON:0003350,1.10e-16,9;UBERON:0004808,1.10e-16,9;UBERON:0001277,1.10e-16,9;UBERON:0005409,1.52e-15,47;UBERON:0000331,1.47e-14,3;UBERON:0002116,1.47e-14,3;UBERON:0001204,1.47e-14,3;UBERON:0001168,1.47e-14,3;UBERON:0000485,1.43e-13,11;UBERON:0002108,4.85e-11,4;UBERON:0001962,3.92e-09,2;UBERON:0001961,3.92e-09,2;UBERON:0001744,3.92e-09,2 | |||
|phase1_expression=0,11.5161884520989,16.3799726180233,14.215817931421,8.5152274090879,1.00727563147134,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,6.42345986988076,27.563134277521,18.5227658348402,14.0056301245828,57.957142934194,25.2030129759931,34.3682291515722,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,11.1069237998689,0,0,0,0,0,0,3.32170343081158,0,0.251335208800269,0,0,1.79763881730844,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,5.27093042874994,1.03135543248187,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,11.5161884520989,16.3799726180233,14.215817931421,8.5152274090879,1.00727563147134,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,6.42345986988076,27.563134277521,18.5227658348402,14.0056301245828,57.957142934194,25.2030129759931,34.3682291515722,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,11.1069237998689,0,0,0,0,0,0,3.32170343081158,0,0.251335208800269,0,0,1.79763881730844,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,5.27093042874994,1.03135543248187,0,0,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78321183..78321200,+ | |short_description=p@chr6:78321183..78321200,+ | ||
}} | }} |
Latest revision as of 03:27, 6 August 2015
Short description: | p@chr6:78321183..78321200, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78321183..78321200, + |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.15e-25 | 6 |
gut absorptive cell | 3.15e-25 | 6 |
enterocyte | 3.15e-25 | 6 |
columnar/cuboidal epithelial cell | 1.43e-21 | 7 |
intestinal epithelial cell | 1.10e-16 | 9 |
epithelial cell of alimentary canal | 1.10e-16 | 9 |
M cell of gut | 3.64e-14 | 3 |
epithelial cell | 8.08e-13 | 25 |
endo-epithelial cell | 8.00e-10 | 15 |
endodermal cell | 3.06e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.19e-39 | 15 |
intestinal mucosa | 5.59e-32 | 13 |
wall of intestine | 5.59e-32 | 13 |
gastrointestinal system mucosa | 5.59e-32 | 13 |
intestine | 9.09e-25 | 31 |
organ component layer | 6.62e-24 | 24 |
epithelium of mucosa | 1.10e-16 | 9 |
gastrointestinal system epithelium | 1.10e-16 | 9 |
intestinal epithelium | 1.10e-16 | 9 |
gastrointestinal system | 1.52e-15 | 47 |
ileal mucosa | 1.47e-14 | 3 |
ileum | 1.47e-14 | 3 |
mucosa of small intestine | 1.47e-14 | 3 |
wall of small intestine | 1.47e-14 | 3 |
simple columnar epithelium | 1.43e-13 | 11 |
small intestine | 4.85e-11 | 4 |
gut-associated lymphoid tissue | 3.92e-09 | 2 |
mucosa-associated lymphoid tissue | 3.92e-09 | 2 |
lymphoid tissue | 3.92e-09 | 2 |