Personal tools

FFCP PHASE1:Mm9::chr5:116896716..116896749,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=68955|HGNC=|MCL_coexpression_id=99|UniProt=Q8BKA3|association_with_transcript=91bp_to_uc008zfb.1_5end|description=CAGE_peak_2_at_Srrm4_5end|id=chr5:116896716..116896749,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,2.09e-09,7;CL:0000680,5.07e-08,6;CL:0000187,5.07e-08,6;CL:0000056,5.07e-08,6;CL:0000182,6.41e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.72e-15!47;UBERON:0009854!4.87e-12!23;UBERON:0009856!4.87e-12!23;UBERON:0002107!1.49e-11!22;UBERON:0007499!1.49e-11!22;UBERON:0006925!1.49e-11!22;UBERON:0009497!1.49e-11!22;UBERON:0000015!1.49e-11!22;UBERON:0002423!1.49e-11!22;UBERON:0006235!1.49e-11!22;UBERON:0008835!1.49e-11!22;UBERON:0003894!1.49e-11!22;UBERON:0004161!1.49e-11!22;UBERON:0008836!1.49e-11!22;UBERON:0005256!2.37e-10!47;UBERON:0002365!7.06e-10!25;UBERON:0002330!7.06e-10!25;UBERON:0005172!2.23e-07!49;UBERON:0005173!2.23e-07!49;UBERON:0002417!2.23e-07!49;UBERON:0000916!2.23e-07!49;UBERON:0004535!9.81e-07!23;UBERON:0001009!9.81e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.26e-19,45;UBERON:0009854,3.29e-18,23;UBERON:0009856,3.29e-18,23;UBERON:0002107,2.80e-17,22;UBERON:0007499,2.80e-17,22;UBERON:0006925,2.80e-17,22;UBERON:0009497,2.80e-17,22;UBERON:0000015,2.80e-17,22;UBERON:0002423,2.80e-17,22;UBERON:0006235,2.80e-17,22;UBERON:0008835,2.80e-17,22;UBERON:0003894,2.80e-17,22;UBERON:0004161,2.80e-17,22;UBERON:0008836,2.80e-17,22;UBERON:0003914,3.34e-17,47;UBERON:0002365,1.61e-14,25;UBERON:0002330,1.61e-14,25;UBERON:0003104,1.33e-12,61;UBERON:0009142,1.33e-12,61;UBERON:0000474,6.29e-10,9;UBERON:0003134,1.24e-08,8;UBERON:0003975,4.81e-08,5;UBERON:0005172,6.14e-08,49;UBERON:0005173,6.14e-08,49;UBERON:0002417,6.14e-08,49;UBERON:0000916,6.14e-08,49;UBERON:0003100,9.27e-08,11;UBERON:0002100,1.43e-07,90;UBERON:0005795,9.31e-07,4;UBERON:0000995,9.31e-07,4|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,2.93993100536592,2.9367480345869,0.782391344348039,0.436050312760893,0.659058548203415,0.777719596297134,0.55994568650145,2.87505128729943,0,0,0,2.31533492432352,2.29226751951005,1.54701627683233,0,0,0,1.0165335962074,0.889294796111139,0,0,0.7104801149461,1.49800055259202,0.768436610643109,0,0,0,0,0,0,0,0.919218786610021,0,0.127687338085188,0.153606533256243,0,0,0,0,1.68828783009504,0.30559649555362,0,0,0,2.04460721999597,2.87171928405785,8.40607017234866,0.860423876981386,67.3171620370673,6.47643829965381,1.94932925234301,4.92829575807069,1.40444420131752,0.340860645156116,0,0.35333957451034,0,0,0,0,0.216491041011214,0.506719730950197,0,3.4255163915718,0,2.22663208597237,0.173485326766136,0.304465478312141,0.922461989024234,0.301445281105245,1.52865319276416,0.753999547978053,0.247194967734374,0.289198713839823,0,0.647067399789637,0,0.484875253135222,1.86391761218122,0,0,0,0,0,0,0.299581278809645,0.915001205637253,0.753926112677186,1.39059456153821,0.511430914660661,0.41557608911912,0.648965052271031,1.42575109390443,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,1.20563854268572,0.612328492361951,0.512454881139399,0.562210347358373,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0.828503090142008,0.703578179943289,0.900310307305074,0.710234206755631,0.983821158737019,1.07986979021165,0.232533944750408,0.536546802799238,0.583826711835847,0.329119699826961,0,0.56748166682099,1.46199987425332,1.75640092232841,2.54992195644706,1.26173969138476,0,0,0.528901133327089,0,0.464473343720877,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.597423819763102,0.189667900953082,0.456994050438915,0,1.4255592949172,0.193952487167626,0.420814919341911,0.569128834118316,0.590440591918409,0.470996183524124,0.370191491765402,2.07516838961004,0.333690211432188,0.196558995113203,0.674586337154561,1.21716072833102,1.20588579876208,2.5462585178142,2.30156909960649,11.3494658742525,2.19649130550465,4.31304619582064,2.23284568601102,5.61667811606209,14.9021537988796,6.27890947326693,8.68398338454061,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0.502518772325447,0.952174563544055,0,0.315270288212382,0.221464689648775,0,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.983528546038072,0,0.160550589987792,0,4.75411341592359,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0.849229592366497,0,0,0,3.21321316421807,2.41298144854057,0.712262414669021,2.28041743095006,6.26886467295635,1.32745138339963,0.242780636154981,0,0.565815239267694,0.295301892880773,1.22974059177571,0.516856586336442,1.09060118843252,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,6.57080782578389,2.75381692122966,0,2.80306630000516,1.13025098687134,1.38719727334758,1.3130957840345,1.47726809770555,0,0,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.324016022465404,0.418176592028937,0,0.404593039154462,0.495920734352016,0.523511883968059,0.388844919875379,0,0,0.448549638131936,0.165458490457098,1.16670713006429,0.774958940866387,0.844780627453891,1.76035857968631,1.95306577265925,2.09718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,1.58711268530648,0,0,0,2.51146472241848,7.13193406714492,5.86085197655248,5.14484109789758,0,0.564751842617067,0,0,0,0.685082519770642,0,0.675022500231806,2.2516060161211,1.35942722695261,2.5888015587591,0,0,0.170733605754134,0,0.419226325255965,1.47074806760011,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,1.77435509923168,0.943131706930381,0.468207537349412,0.448176066834085,0.459483751644906,0.952587382566147,0.347652977834566,0.77163688185482,0,0.294397840268795,0,0.887379030796687,0.476872379894642,0.726732083161643,0.658765662907314,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.949080144993393,0.197008964751127,0.409231043169689,0.929621047115796,0,0.749431733813838,0.701794825336225,0.214871054048298,0,0.661774257358546,0.927471342481686|short_description=p2@Srrm4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:68955
|HGNC=
|MCL_coexpression_id=99
|TSSclassifier=NA
|UniProt=uniprot:Q8BKA3
|association_with_transcript=91bp_to_uc008zfb.1_5end
|cluster_id=chr5:116896716..116896749,-
|description=CAGE_peak_2_at_Srrm4_5end
|id=chr5:116896716..116896749,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000222,2.09e-09,7;CL:0000680,5.07e-08,6;CL:0000187,5.07e-08,6;CL:0000056,5.07e-08,6;CL:0000182,6.41e-08,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!1.72e-15!47;UBERON:0009854!4.87e-12!23;UBERON:0009856!4.87e-12!23;UBERON:0002107!1.49e-11!22;UBERON:0007499!1.49e-11!22;UBERON:0006925!1.49e-11!22;UBERON:0009497!1.49e-11!22;UBERON:0000015!1.49e-11!22;UBERON:0002423!1.49e-11!22;UBERON:0006235!1.49e-11!22;UBERON:0008835!1.49e-11!22;UBERON:0003894!1.49e-11!22;UBERON:0004161!1.49e-11!22;UBERON:0008836!1.49e-11!22;UBERON:0005256!2.37e-10!47;UBERON:0002365!7.06e-10!25;UBERON:0002330!7.06e-10!25;UBERON:0005172!2.23e-07!49;UBERON:0005173!2.23e-07!49;UBERON:0002417!2.23e-07!49;UBERON:0000916!2.23e-07!49;UBERON:0004535!9.81e-07!23;UBERON:0001009!9.81e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0005256,6.26e-19,45;UBERON:0009854,3.29e-18,23;UBERON:0009856,3.29e-18,23;UBERON:0002107,2.80e-17,22;UBERON:0007499,2.80e-17,22;UBERON:0006925,2.80e-17,22;UBERON:0009497,2.80e-17,22;UBERON:0000015,2.80e-17,22;UBERON:0002423,2.80e-17,22;UBERON:0006235,2.80e-17,22;UBERON:0008835,2.80e-17,22;UBERON:0003894,2.80e-17,22;UBERON:0004161,2.80e-17,22;UBERON:0008836,2.80e-17,22;UBERON:0003914,3.34e-17,47;UBERON:0002365,1.61e-14,25;UBERON:0002330,1.61e-14,25;UBERON:0003104,1.33e-12,61;UBERON:0009142,1.33e-12,61;UBERON:0000474,6.29e-10,9;UBERON:0003134,1.24e-08,8;UBERON:0003975,4.81e-08,5;UBERON:0005172,6.14e-08,49;UBERON:0005173,6.14e-08,49;UBERON:0002417,6.14e-08,49;UBERON:0000916,6.14e-08,49;UBERON:0003100,9.27e-08,11;UBERON:0002100,1.43e-07,90;UBERON:0005795,9.31e-07,4;UBERON:0000995,9.31e-07,4
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,2.93993100536592,2.9367480345869,0.782391344348039,0.436050312760893,0.659058548203415,0.777719596297134,0.55994568650145,2.87505128729943,0,0,0,2.31533492432352,2.29226751951005,1.54701627683233,0,0,0,1.0165335962074,0.889294796111139,0,0,0.7104801149461,1.49800055259202,0.768436610643109,0,0,0,0,0,0,0,0.919218786610021,0,0.127687338085188,0.153606533256243,0,0,0,0,1.68828783009504,0.30559649555362,0,0,0,2.04460721999597,2.87171928405785,8.40607017234866,0.860423876981386,67.3171620370673,6.47643829965381,1.94932925234301,4.92829575807069,1.40444420131752,0.340860645156116,0,0.35333957451034,0,0,0,0,0.216491041011214,0.506719730950197,0,3.4255163915718,0,2.22663208597237,0.173485326766136,0.304465478312141,0.922461989024234,0.301445281105245,1.52865319276416,0.753999547978053,0.247194967734374,0.289198713839823,0,0.647067399789637,0,0.484875253135222,1.86391761218122,0,0,0,0,0,0,0.299581278809645,0.915001205637253,0.753926112677186,1.39059456153821,0.511430914660661,0.41557608911912,0.648965052271031,1.42575109390443,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,1.20563854268572,0.612328492361951,0.512454881139399,0.562210347358373,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0.828503090142008,0.703578179943289,0.900310307305074,0.710234206755631,0.983821158737019,1.07986979021165,0.232533944750408,0.536546802799238,0.583826711835847,0.329119699826961,0,0.56748166682099,1.46199987425332,1.75640092232841,2.54992195644706,1.26173969138476,0,0,0.528901133327089,0,0.464473343720877,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0.597423819763102,0.189667900953082,0.456994050438915,0,1.4255592949172,0.193952487167626,0.420814919341911,0.569128834118316,0.590440591918409,0.470996183524124,0.370191491765402,2.07516838961004,0.333690211432188,0.196558995113203,0.674586337154561,1.21716072833102,1.20588579876208,2.5462585178142,2.30156909960649,11.3494658742525,2.19649130550465,4.31304619582064,2.23284568601102,5.61667811606209,14.9021537988796,6.27890947326693,8.68398338454061,0.554259570499814,0.189491411770485,0,0.169745085775188,0,0.502518772325447,0.952174563544055,0,0.315270288212382,0.221464689648775,0,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0.983528546038072,0,0.160550589987792,0,4.75411341592359,0.252470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0.849229592366497,0,0,0,3.21321316421807,2.41298144854057,0.712262414669021,2.28041743095006,6.26886467295635,1.32745138339963,0.242780636154981,0,0.565815239267694,0.295301892880773,1.22974059177571,0.516856586336442,1.09060118843252,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,6.57080782578389,2.75381692122966,0,2.80306630000516,1.13025098687134,1.38719727334758,1.3130957840345,1.47726809770555,0,0,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.324016022465404,0.418176592028937,0,0.404593039154462,0.495920734352016,0.523511883968059,0.388844919875379,0,0,0.448549638131936,0.165458490457098,1.16670713006429,0.774958940866387,0.844780627453891,1.76035857968631,1.95306577265925,2.09718688851422,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,1.58711268530648,0,0,0,2.51146472241848,7.13193406714492,5.86085197655248,5.14484109789758,0,0.564751842617067,0,0,0,0.685082519770642,0,0.675022500231806,2.2516060161211,1.35942722695261,2.5888015587591,0,0,0.170733605754134,0,0.419226325255965,1.47074806760011,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,1.77435509923168,0.943131706930381,0.468207537349412,0.448176066834085,0.459483751644906,0.952587382566147,0.347652977834566,0.77163688185482,0,0.294397840268795,0,0.887379030796687,0.476872379894642,0.726732083161643,0.658765662907314,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.949080144993393,0.197008964751127,0.409231043169689,0.929621047115796,0,0.749431733813838,0.701794825336225,0.214871054048298,0,0.661774257358546,0.927471342481686
|short_description=p2@Srrm4
}}

Revision as of 03:29, 6 August 2015

Short description:p2@Srrm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Srrm4_5end
Coexpression cluster:MCL_coexpression_mm9:99
Association with transcript: 91bp_to_uc008zfb.1_5end
EntrezGene:68955
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Srrm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C467.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F411.35
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A314.90
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F57.13
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mesodermal cell2.09e-097
muscle precursor cell5.07e-086
muscle cell5.07e-086
myoblast5.07e-086
hepatocyte6.41e-085

Uber anatomy
Ontology termp-valuen
trunk mesenchyme6.26e-1945
digestive tract diverticulum3.29e-1823
sac3.29e-1823
liver2.80e-1722
epithelial sac2.80e-1722
digestive gland2.80e-1722
epithelium of foregut-midgut junction2.80e-1722
anatomical boundary2.80e-1722
hepatobiliary system2.80e-1722
foregut-midgut junction2.80e-1722
hepatic diverticulum2.80e-1722
liver primordium2.80e-1722
septum transversum2.80e-1722
liver bud2.80e-1722
epithelial tube3.34e-1747
exocrine gland1.61e-1425
exocrine system1.61e-1425
mesenchyme1.33e-1261
entire embryonic mesenchyme1.33e-1261
female reproductive system6.29e-109
female reproductive organ1.24e-088
internal female genitalia4.81e-085
abdomen element6.14e-0849
abdominal segment element6.14e-0849
abdominal segment of trunk6.14e-0849
abdomen6.14e-0849
female organism9.27e-0811
trunk1.43e-0790
embryonic uterus9.31e-074
uterus9.31e-074
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:116896716..116896749,-&oldid=3974482"