FFCP PHASE1:Mm9::chr6:78330786..78330812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2450 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:78330786..78330812,+ | |||
|description=CAGE_peak_at_chr6:78330786..78330812,+ | |description=CAGE_peak_at_chr6:78330786..78330812,+ | ||
|id=chr6:78330786..78330812,+ | |id=chr6:78330786..78330812,+ | ||
|ontology_enrichment_celltype=CL:0000239!8.29e-18!6;CL:0000677!8.29e-18!6;CL:0000212!8.29e-18!6;CL:0000584!8.29e-18!6;CL:0002563!1.38e-15!9;CL:0002251!1.38e-15!9;CL:0000075!3.51e-15!7;CL:0000066!2.20e-10!25;CL:0000473!6.06e-10!3;CL:0000627!6.06e-10!3;CL:0000682!6.06e-10!3;CL:0002076!5.54e-09!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.55e-20,6;CL:0000677,4.55e-20,6;CL:0000584,4.55e-20,6;CL:0002563,1.22e-17,9;CL:0002251,1.22e-17,9;CL:0000075,3.93e-17,7;CL:0000066,5.45e-12,25;CL:0000682,4.14e-11,3;CL:0002076,2.98e-10,15;CL:0000223,1.78e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.38e-32!15;UBERON:0000160!1.93e-27!43;UBERON:0001242!3.72e-26!13;UBERON:0000060!3.72e-26!13;UBERON:0001262!3.72e-26!13;UBERON:0004786!3.72e-26!13;UBERON:0004923!6.48e-19!24;UBERON:0005409!8.23e-19!59;UBERON:0003350!1.38e-15!9;UBERON:0004808!1.38e-15!9;UBERON:0001277!1.38e-15!9;UBERON:0000485!1.38e-12!11;UBERON:0000331!7.99e-10!3;UBERON:0002116!7.99e-10!3;UBERON:0001204!7.99e-10!3;UBERON:0001168!7.99e-10!3;UBERON:0002108!1.95e-08!16;UBERON:0001007!3.63e-08!128;UBERON:0001555!3.63e-08!128;UBERON:0007026!3.63e-08!128;UBERON:0004119!5.73e-08!130;UBERON:0000925!5.73e-08!130;UBERON:0006595!5.73e-08!130;UBERON:0001962!2.37e-07!2;UBERON:0001961!2.37e-07!2;UBERON:0001744!2.37e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.29e-36,15;UBERON:0000160,6.62e-33,31;UBERON:0001242,1.06e-29,13;UBERON:0001262,1.06e-29,13;UBERON:0004786,1.06e-29,13;UBERON:0004923,1.00e-21,24;UBERON:0005409,1.55e-20,47;UBERON:0003350,1.22e-17,9;UBERON:0004808,1.22e-17,9;UBERON:0001277,1.22e-17,9;UBERON:0000485,2.77e-14,11;UBERON:0002108,8.07e-14,4;UBERON:0000331,5.68e-11,3;UBERON:0002116,5.68e-11,3;UBERON:0001204,5.68e-11,3;UBERON:0001168,5.68e-11,3;UBERON:0001007,2.90e-08,116;UBERON:0001555,2.90e-08,116;UBERON:0007026,2.90e-08,116;UBERON:0001962,3.69e-08,2;UBERON:0001961,3.69e-08,2;UBERON:0001744,3.69e-08,2;UBERON:0004119,4.66e-08,118;UBERON:0000925,4.66e-08,118;UBERON:0006595,4.66e-08,118 | |||
|phase1_expression=0,13.2610654902957,18.654968814971,19.660173734944,22.0394121176393,1.84667199103079,2.56973904655078,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,21.5989770771099,17.6645146421721,17.2269589234506,26.7072437618626,12.4973314957816,32.6840281464963,11.5933859689568,13.082100128663,0,0,0,0,3.15845826181135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,37.8164310328868,0,0,0,0,0,0,18.0321043386914,0,0,0,0,18.8752075817387,28.3140845335849,17.1261494998756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,14.8537276229834,95.9309338032489,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,13.2610654902957,18.654968814971,19.660173734944,22.0394121176393,1.84667199103079,2.56973904655078,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0,0,0,21.5989770771099,17.6645146421721,17.2269589234506,26.7072437618626,12.4973314957816,32.6840281464963,11.5933859689568,13.082100128663,0,0,0,0,3.15845826181135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8775888853195,37.8164310328868,0,0,0,0,0,0,18.0321043386914,0,0,0,0,18.8752075817387,28.3140845335849,17.1261494998756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,14.8537276229834,95.9309338032489,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78330786..78330812,+ | |short_description=p@chr6:78330786..78330812,+ | ||
}} | }} |
Latest revision as of 03:36, 6 August 2015
Short description: | p@chr6:78330786..78330812, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78330786..78330812, + |
Coexpression cluster: | MCL_coexpression_mm9:2450 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.55e-20 | 6 |
gut absorptive cell | 4.55e-20 | 6 |
enterocyte | 4.55e-20 | 6 |
intestinal epithelial cell | 1.22e-17 | 9 |
epithelial cell of alimentary canal | 1.22e-17 | 9 |
columnar/cuboidal epithelial cell | 3.93e-17 | 7 |
epithelial cell | 5.45e-12 | 25 |
M cell of gut | 4.14e-11 | 3 |
endo-epithelial cell | 2.98e-10 | 15 |
endodermal cell | 1.78e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.29e-36 | 15 |
intestine | 6.62e-33 | 31 |
intestinal mucosa | 1.06e-29 | 13 |
wall of intestine | 1.06e-29 | 13 |
gastrointestinal system mucosa | 1.06e-29 | 13 |
organ component layer | 1.00e-21 | 24 |
gastrointestinal system | 1.55e-20 | 47 |
epithelium of mucosa | 1.22e-17 | 9 |
gastrointestinal system epithelium | 1.22e-17 | 9 |
intestinal epithelium | 1.22e-17 | 9 |
simple columnar epithelium | 2.77e-14 | 11 |
small intestine | 8.07e-14 | 4 |
ileal mucosa | 5.68e-11 | 3 |
ileum | 5.68e-11 | 3 |
mucosa of small intestine | 5.68e-11 | 3 |
wall of small intestine | 5.68e-11 | 3 |
digestive system | 2.90e-08 | 116 |
digestive tract | 2.90e-08 | 116 |
primitive gut | 2.90e-08 | 116 |
gut-associated lymphoid tissue | 3.69e-08 | 2 |
mucosa-associated lymphoid tissue | 3.69e-08 | 2 |
lymphoid tissue | 3.69e-08 | 2 |
endoderm-derived structure | 4.66e-08 | 118 |
endoderm | 4.66e-08 | 118 |
presumptive endoderm | 4.66e-08 | 118 |