FFCP PHASE1:Mm9::chr6:78417498..78417509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:78417498..78417509,- | |||
|description=CAGE_peak_at_chr6:78417498..78417509,- | |description=CAGE_peak_at_chr6:78417498..78417509,- | ||
|id=chr6:78417498..78417509,- | |id=chr6:78417498..78417509,- | ||
|ontology_enrichment_celltype=CL:0000239!3.16e-24!6;CL:0000677!3.16e-24!6;CL:0000212!3.16e-24!6;CL:0000584!3.16e-24!6;CL:0000075!1.05e-20!7;CL:0002563!5.24e-16!9;CL:0002251!5.24e-16!9;CL:0000473!8.41e-14!3;CL:0000627!8.41e-14!3;CL:0000682!8.41e-14!3;CL:0000066!2.74e-12!25;CL:0002076!2.09e-09!15;CL:0000223!6.39e-07!20 | |ontology_enrichment_celltype=CL:0000239!3.16e-24!6;CL:0000677!3.16e-24!6;CL:0000212!3.16e-24!6;CL:0000584!3.16e-24!6;CL:0000075!1.05e-20!7;CL:0002563!5.24e-16!9;CL:0002251!5.24e-16!9;CL:0000473!8.41e-14!3;CL:0000627!8.41e-14!3;CL:0000682!8.41e-14!3;CL:0000066!2.74e-12!25;CL:0002076!2.09e-09!15;CL:0000223!6.39e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.98e-20,3;CL:0000239,4.08e-17,6;CL:0000677,4.08e-17,6;CL:0000584,4.08e-17,6;CL:0000075,1.02e-14,7;CL:0000066,4.80e-12,25;CL:0002563,1.65e-11,9;CL:0002251,1.65e-11,9;CL:0000473,5.21e-09,7;CL:0002076,5.48e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.52e-32!15;UBERON:0001242!1.05e-24!13;UBERON:0000060!1.05e-24!13;UBERON:0001262!1.05e-24!13;UBERON:0004786!1.05e-24!13;UBERON:0004923!3.10e-19!24;UBERON:0000160!3.12e-16!43;UBERON:0003350!5.24e-16!9;UBERON:0004808!5.24e-16!9;UBERON:0001277!5.24e-16!9;UBERON:0000331!1.50e-13!3;UBERON:0002116!1.50e-13!3;UBERON:0001204!1.50e-13!3;UBERON:0001168!1.50e-13!3;UBERON:0000485!5.21e-13!11;UBERON:0005409!3.64e-11!59;UBERON:0001962!2.68e-09!2;UBERON:0001961!2.68e-09!2;UBERON:0001744!2.68e-09!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.89e-33,15;UBERON:0001242,2.05e-23,13;UBERON:0001262,2.05e-23,13;UBERON:0004786,2.05e-23,13;UBERON:0004923,2.05e-20,24;UBERON:0000331,7.19e-20,3;UBERON:0002116,7.19e-20,3;UBERON:0001204,7.19e-20,3;UBERON:0001168,7.19e-20,3;UBERON:0000160,1.68e-15,31;UBERON:0002108,4.59e-15,4;UBERON:0001962,2.26e-13,2;UBERON:0001961,2.26e-13,2;UBERON:0001744,2.26e-13,2;UBERON:0003350,1.65e-11,9;UBERON:0004808,1.65e-11,9;UBERON:0001277,1.65e-11,9;UBERON:0005409,6.61e-10,47;UBERON:0000485,1.85e-09,11;UBERON:0002465,3.19e-09,3;UBERON:0003199,1.78e-07,1 | |||
|phase1_expression=0,4.18770489167233,5.0049916332849,0.90739263392049,2.00358291978539,0.33575854382378,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.75291137280604,9.18771142584032,6.46142994238612,5.38678081714723,7.22088993934221,1.00812051903972,13.3038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58670339998127,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.18770489167233,5.0049916332849,0.90739263392049,2.00358291978539,0.33575854382378,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,2.75291137280604,9.18771142584032,6.46142994238612,5.38678081714723,7.22088993934221,1.00812051903972,13.3038306393183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58670339998127,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78417498..78417509,- | |short_description=p@chr6:78417498..78417509,- | ||
}} | }} |
Latest revision as of 03:42, 6 August 2015
Short description: | p@chr6:78417498..78417509, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78417498..78417509, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.98e-20 | 3 |
brush border epithelial cell | 4.08e-17 | 6 |
gut absorptive cell | 4.08e-17 | 6 |
enterocyte | 4.08e-17 | 6 |
columnar/cuboidal epithelial cell | 1.02e-14 | 7 |
epithelial cell | 4.80e-12 | 25 |
intestinal epithelial cell | 1.65e-11 | 9 |
epithelial cell of alimentary canal | 1.65e-11 | 9 |
defensive cell | 5.21e-09 | 7 |
endo-epithelial cell | 5.48e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.89e-33 | 15 |
intestinal mucosa | 2.05e-23 | 13 |
wall of intestine | 2.05e-23 | 13 |
gastrointestinal system mucosa | 2.05e-23 | 13 |
organ component layer | 2.05e-20 | 24 |
ileal mucosa | 7.19e-20 | 3 |
ileum | 7.19e-20 | 3 |
mucosa of small intestine | 7.19e-20 | 3 |
wall of small intestine | 7.19e-20 | 3 |
intestine | 1.68e-15 | 31 |
small intestine | 4.59e-15 | 4 |
gut-associated lymphoid tissue | 2.26e-13 | 2 |
mucosa-associated lymphoid tissue | 2.26e-13 | 2 |
lymphoid tissue | 2.26e-13 | 2 |
epithelium of mucosa | 1.65e-11 | 9 |
gastrointestinal system epithelium | 1.65e-11 | 9 |
intestinal epithelium | 1.65e-11 | 9 |
gastrointestinal system | 6.61e-10 | 47 |
simple columnar epithelium | 1.85e-09 | 11 |
lymphoid system | 3.19e-09 | 3 |
egg chamber | 1.78e-07 | 1 |