FFCP PHASE1:Mm9::chr6:85781819..85781853,-: Difference between revisions
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{{FFCP|EntrezGene=68396|HGNC=|MCL_coexpression_id=12|UniProt=Q9JIY7|association_with_transcript=30bp_to_NM_023455,uc009cqh.2_5end|description=CAGE_peak_1_at_Nat8_5end|id=chr6:85781819..85781853,-|ontology_enrichment_celltype=CL:0000066!4.87e-10!25;CL:0002563!2.10e-09!9;CL:0002251!2.10e-09!9;CL:0000223!2.17e-08!20;CL:0000239!6.57e-08!6;CL:0000677!6.57e-08!6;CL:0000212!6.57e-08!6;CL:0000584!6.57e-08!6|ontology_enrichment_celltype_v019_2=CL:0000066,1.82e-13,25;CL:0000239,1.79e-12,6;CL:0000677,1.79e-12,6;CL:0000584,1.79e-12,6;CL:0000075,1.43e-10,7;CL:0002563,1.79e-10,9;CL:0002251,1.79e-10,9;CL:0000223,3.19e-10,20;CL:0000682,1.06e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.54e-16!15;UBERON:0000160!2.45e-15!43;UBERON:0001242!5.50e-14!13;UBERON:0000060!5.50e-14!13;UBERON:0001262!5.50e-14!13;UBERON:0004786!5.50e-14!13;UBERON:0005409!3.16e-10!59;UBERON:0003350!2.10e-09!9;UBERON:0004808!2.10e-09!9;UBERON:0001277!2.10e-09!9;UBERON:0004923!2.35e-08!24;UBERON:0000485!2.90e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.15e-35,31;UBERON:0000344,7.38e-22,15;UBERON:0005409,2.63e-21,47;UBERON:0001242,5.80e-18,13;UBERON:0001262,5.80e-18,13;UBERON:0004786,5.80e-18,13;UBERON:0004923,1.96e-12,24;UBERON:0001007,1.14e-10,116;UBERON:0001555,1.14e-10,116;UBERON:0007026,1.14e-10,116;UBERON:0003350,1.79e-10,9;UBERON:0004808,1.79e-10,9;UBERON:0001277,1.79e-10,9;UBERON:0004119,2.33e-10,118;UBERON:0000925,2.33e-10,118;UBERON:0006595,2.33e-10,118;UBERON:0002108,5.35e-09,4;UBERON:0004921,5.39e-09,114;UBERON:0000485,2.32e-08,11;UBERON:0000331,2.66e-07,3;UBERON:0002116,2.66e-07,3;UBERON:0001204,2.66e-07,3;UBERON:0001168,2.66e-07,3|phase1_expression=0,48.8565570695106,47.3199208965117,50.2090590769338,50.0895729946347,5.70789524500425,12.6150825921584,0,0,0,0,0,0,0,0,0,0,0,0,0,17.093701320365,0,0,39.9981056983517,56.2052738614567,67.7593717655724,60.7374414584295,40.5085917449471,67.8383607459255,37.3004592044698,28.6032358745343,0,0,0,0.288851619751275,2.32728503501889,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,13.7667820317022,35.358509352803,50.7321000139548,9.09686984426737,11.6486990645307,18.2577746171277,0,0,0,0,0,0,0,0,0,0,32.1998540807749,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,41.894957054209,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,124.567881184892,39.9320355661952,0,0,0,2.01683524623343,5.11469500843202,9.70150693174052,26.0990983849481,15.317002789333,13.8234364840148,13.5290400987983,10.3330966173134,29.6610404855893,22.2622191370935,37.2394180985667,0,0,0,2.44381593414377,4.26695471768777,11.3620028222316,0.632365371242573,0.590440591918409,13.815888050041,41.0912555859596,0.592905254174298,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9014286036478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.888986911206461,0.618105171716683,0,0.505394423527595,0.760437899670719,0.565879024158229,0.749132059759059,0.640251524048693,0.459483751644906,0,0.115884325944855,0.578727661391115,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.658765662907314,0.338458431566706,0.365855945745545,1.05227884575137,0.950628796921032,0,0.711810108745045,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0,0.935726433781634,1.28922632428979,0,0,0|short_description=p1@Nat8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68396 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JIY7 | |||
|association_with_transcript=30bp_to_NM_023455,uc009cqh.2_5end | |||
|cluster_id=chr6:85781819..85781853,- | |||
|description=CAGE_peak_1_at_Nat8_5end | |||
|id=chr6:85781819..85781853,- | |||
|ontology_enrichment_celltype=CL:0000066!4.87e-10!25;CL:0002563!2.10e-09!9;CL:0002251!2.10e-09!9;CL:0000223!2.17e-08!20;CL:0000239!6.57e-08!6;CL:0000677!6.57e-08!6;CL:0000212!6.57e-08!6;CL:0000584!6.57e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.82e-13,25;CL:0000239,1.79e-12,6;CL:0000677,1.79e-12,6;CL:0000584,1.79e-12,6;CL:0000075,1.43e-10,7;CL:0002563,1.79e-10,9;CL:0002251,1.79e-10,9;CL:0000223,3.19e-10,20;CL:0000682,1.06e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.54e-16!15;UBERON:0000160!2.45e-15!43;UBERON:0001242!5.50e-14!13;UBERON:0000060!5.50e-14!13;UBERON:0001262!5.50e-14!13;UBERON:0004786!5.50e-14!13;UBERON:0005409!3.16e-10!59;UBERON:0003350!2.10e-09!9;UBERON:0004808!2.10e-09!9;UBERON:0001277!2.10e-09!9;UBERON:0004923!2.35e-08!24;UBERON:0000485!2.90e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.15e-35,31;UBERON:0000344,7.38e-22,15;UBERON:0005409,2.63e-21,47;UBERON:0001242,5.80e-18,13;UBERON:0001262,5.80e-18,13;UBERON:0004786,5.80e-18,13;UBERON:0004923,1.96e-12,24;UBERON:0001007,1.14e-10,116;UBERON:0001555,1.14e-10,116;UBERON:0007026,1.14e-10,116;UBERON:0003350,1.79e-10,9;UBERON:0004808,1.79e-10,9;UBERON:0001277,1.79e-10,9;UBERON:0004119,2.33e-10,118;UBERON:0000925,2.33e-10,118;UBERON:0006595,2.33e-10,118;UBERON:0002108,5.35e-09,4;UBERON:0004921,5.39e-09,114;UBERON:0000485,2.32e-08,11;UBERON:0000331,2.66e-07,3;UBERON:0002116,2.66e-07,3;UBERON:0001204,2.66e-07,3;UBERON:0001168,2.66e-07,3 | |||
|phase1_expression=0,48.8565570695106,47.3199208965117,50.2090590769338,50.0895729946347,5.70789524500425,12.6150825921584,0,0,0,0,0,0,0,0,0,0,0,0,0,17.093701320365,0,0,39.9981056983517,56.2052738614567,67.7593717655724,60.7374414584295,40.5085917449471,67.8383607459255,37.3004592044698,28.6032358745343,0,0,0,0.288851619751275,2.32728503501889,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,13.7667820317022,35.358509352803,50.7321000139548,9.09686984426737,11.6486990645307,18.2577746171277,0,0,0,0,0,0,0,0,0,0,32.1998540807749,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,41.894957054209,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,124.567881184892,39.9320355661952,0,0,0,2.01683524623343,5.11469500843202,9.70150693174052,26.0990983849481,15.317002789333,13.8234364840148,13.5290400987983,10.3330966173134,29.6610404855893,22.2622191370935,37.2394180985667,0,0,0,2.44381593414377,4.26695471768777,11.3620028222316,0.632365371242573,0.590440591918409,13.815888050041,41.0912555859596,0.592905254174298,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9014286036478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.888986911206461,0.618105171716683,0,0.505394423527595,0.760437899670719,0.565879024158229,0.749132059759059,0.640251524048693,0.459483751644906,0,0.115884325944855,0.578727661391115,0.824171801606613,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.658765662907314,0.338458431566706,0.365855945745545,1.05227884575137,0.950628796921032,0,0.711810108745045,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0,0.935726433781634,1.28922632428979,0,0,0 | |||
|short_description=p1@Nat8 | |||
}} |
Revision as of 05:25, 6 August 2015
Short description: | p1@Nat8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nat8_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 30bp_to_NM_023455, uc009cqh.2_5end |
EntrezGene: | 68396 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.82e-13 | 25 |
brush border epithelial cell | 1.79e-12 | 6 |
gut absorptive cell | 1.79e-12 | 6 |
enterocyte | 1.79e-12 | 6 |
columnar/cuboidal epithelial cell | 1.43e-10 | 7 |
intestinal epithelial cell | 1.79e-10 | 9 |
epithelial cell of alimentary canal | 1.79e-10 | 9 |
endodermal cell | 3.19e-10 | 20 |
M cell of gut | 1.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.15e-35 | 31 |
mucosa | 7.38e-22 | 15 |
gastrointestinal system | 2.63e-21 | 47 |
intestinal mucosa | 5.80e-18 | 13 |
wall of intestine | 5.80e-18 | 13 |
gastrointestinal system mucosa | 5.80e-18 | 13 |
organ component layer | 1.96e-12 | 24 |
digestive system | 1.14e-10 | 116 |
digestive tract | 1.14e-10 | 116 |
primitive gut | 1.14e-10 | 116 |
epithelium of mucosa | 1.79e-10 | 9 |
gastrointestinal system epithelium | 1.79e-10 | 9 |
intestinal epithelium | 1.79e-10 | 9 |
endoderm-derived structure | 2.33e-10 | 118 |
endoderm | 2.33e-10 | 118 |
presumptive endoderm | 2.33e-10 | 118 |
small intestine | 5.35e-09 | 4 |
subdivision of digestive tract | 5.39e-09 | 114 |
simple columnar epithelium | 2.32e-08 | 11 |
ileal mucosa | 2.66e-07 | 3 |
ileum | 2.66e-07 | 3 |
mucosa of small intestine | 2.66e-07 | 3 |
wall of small intestine | 2.66e-07 | 3 |