FFCP PHASE1:Mm9::chr1:94847471..94847480,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1365 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94847471..94847480,+ | |||
|description=CAGE_peak_at_chr1:94847471..94847480,+ | |description=CAGE_peak_at_chr1:94847471..94847480,+ | ||
|id=chr1:94847471..94847480,+ | |id=chr1:94847471..94847480,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.34e-10!9;CL:0002251!1.34e-10!9;CL:0000239!1.41e-07!6;CL:0000677!1.41e-07!6;CL:0000212!1.41e-07!6;CL:0000584!1.41e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.14e-15,9;CL:0002251,3.14e-15,9;CL:0000239,1.37e-09,6;CL:0000677,1.37e-09,6;CL:0000584,1.37e-09,6;CL:0002076,1.33e-08,15;CL:0000075,3.60e-08,7;CL:0000066,2.53e-07,25;CL:0002250,2.59e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.39e-27!59;UBERON:0000160!8.77e-22!43;UBERON:0000344!3.73e-17!15;UBERON:0001242!3.29e-15!13;UBERON:0000060!3.29e-15!13;UBERON:0001262!3.29e-15!13;UBERON:0004786!3.29e-15!13;UBERON:0004923!5.31e-13!24;UBERON:0003350!1.34e-10!9;UBERON:0004808!1.34e-10!9;UBERON:0001277!1.34e-10!9;UBERON:0004119!2.31e-10!130;UBERON:0000925!2.31e-10!130;UBERON:0006595!2.31e-10!130;UBERON:0001007!1.79e-09!128;UBERON:0001555!1.79e-09!128;UBERON:0007026!1.79e-09!128;UBERON:0004921!2.03e-08!126;UBERON:0004185!2.03e-08!126;UBERON:0000485!3.18e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.31e-50,31;UBERON:0005409,4.77e-46,47;UBERON:0000344,1.45e-27,15;UBERON:0001242,7.35e-24,13;UBERON:0001262,7.35e-24,13;UBERON:0004786,7.35e-24,13;UBERON:0001007,1.09e-19,116;UBERON:0001555,1.09e-19,116;UBERON:0007026,1.09e-19,116;UBERON:0004119,3.16e-19,118;UBERON:0000925,3.16e-19,118;UBERON:0006595,3.16e-19,118;UBERON:0004923,2.03e-18,24;UBERON:0004921,1.82e-17,114;UBERON:0003350,3.14e-15,9;UBERON:0004808,3.14e-15,9;UBERON:0001277,3.14e-15,9;UBERON:0000485,3.24e-12,11;UBERON:0002108,1.34e-10,4;UBERON:0000331,1.96e-08,3;UBERON:0002116,1.96e-08,3;UBERON:0001204,1.96e-08,3;UBERON:0001168,1.96e-08,3;UBERON:0011216,3.37e-07,194 | |||
|phase1_expression=0,0.697950815278722,1.81999695755814,3.93203474698879,2.00358291978539,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,1.60586496747019,1.14846392823004,3.01533397311352,0.861884930743556,4.18051522804023,2.77233142735924,2.66076612786366,0,0,0,2.3108129580102,1.32987716286794,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,9.31958806090611,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,3.17340679996253,0.213288250535234,0,2.06187938115349,1.4117846723634,2.00140239460383,1.71203063501303,1.42358718463353,1.64698954724011,1.50801125280162,1.1937388322469,0.974820435595601,1.79763881730844,3.6743468478698,2.58883655230677,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.180938774784468,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.609958401380546,2.80813886136683,5.43629569637619,4.36725127492355,2.29269388854195,0.661227645802687,0.785267825952089,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0,2.14368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0.952587382566147,0,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0 | |phase1_expression=0,0.697950815278722,1.81999695755814,3.93203474698879,2.00358291978539,1.34303417529512,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,1.60586496747019,1.14846392823004,3.01533397311352,0.861884930743556,4.18051522804023,2.77233142735924,2.66076612786366,0,0,0,2.3108129580102,1.32987716286794,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,9.31958806090611,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,3.17340679996253,0.213288250535234,0,2.06187938115349,1.4117846723634,2.00140239460383,1.71203063501303,1.42358718463353,1.64698954724011,1.50801125280162,1.1937388322469,0.974820435595601,1.79763881730844,3.6743468478698,2.58883655230677,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0.180938774784468,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.609958401380546,2.80813886136683,5.43629569637619,4.36725127492355,2.29269388854195,0.661227645802687,0.785267825952089,2.72191443912765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0,2.14368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0.952587382566147,0,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0.701794825336225,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:94847471..94847480,+ | |short_description=p@chr1:94847471..94847480,+ | ||
}} | }} |
Latest revision as of 05:35, 6 August 2015
Short description: | p@chr1:94847471..94847480, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:94847471..94847480, + |
Coexpression cluster: | MCL_coexpression_mm9:1365 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.14e-15 | 9 |
epithelial cell of alimentary canal | 3.14e-15 | 9 |
brush border epithelial cell | 1.37e-09 | 6 |
gut absorptive cell | 1.37e-09 | 6 |
enterocyte | 1.37e-09 | 6 |
endo-epithelial cell | 1.33e-08 | 15 |
columnar/cuboidal epithelial cell | 3.60e-08 | 7 |
epithelial cell | 2.53e-07 | 25 |
intestinal crypt stem cell | 2.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.31e-50 | 31 |
gastrointestinal system | 4.77e-46 | 47 |
mucosa | 1.45e-27 | 15 |
intestinal mucosa | 7.35e-24 | 13 |
wall of intestine | 7.35e-24 | 13 |
gastrointestinal system mucosa | 7.35e-24 | 13 |
digestive system | 1.09e-19 | 116 |
digestive tract | 1.09e-19 | 116 |
primitive gut | 1.09e-19 | 116 |
endoderm-derived structure | 3.16e-19 | 118 |
endoderm | 3.16e-19 | 118 |
presumptive endoderm | 3.16e-19 | 118 |
organ component layer | 2.03e-18 | 24 |
subdivision of digestive tract | 1.82e-17 | 114 |
epithelium of mucosa | 3.14e-15 | 9 |
gastrointestinal system epithelium | 3.14e-15 | 9 |
intestinal epithelium | 3.14e-15 | 9 |
simple columnar epithelium | 3.24e-12 | 11 |
small intestine | 1.34e-10 | 4 |
ileal mucosa | 1.96e-08 | 3 |
ileum | 1.96e-08 | 3 |
mucosa of small intestine | 1.96e-08 | 3 |
wall of small intestine | 1.96e-08 | 3 |
organ system subdivision | 3.37e-07 | 194 |